RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 ACCSQ96QU6 501 aa20.82■□□□□ 0.92
COL27A1-207ENST00000494090 PIGSQ96S52 555 aa20.82■□□□□ 0.92
COL27A1-207ENST00000494090 JRKLQ9Y4A0 524 aa20.82■□□□□ 0.92
COL27A1-207ENST00000494090 NUB1Q9Y5A7 615 aa20.82■□□□□ 0.92
COL27A1-207ENST00000494090 LRRC41Q15345 812 aa20.81■□□□□ 0.92
COL27A1-207ENST00000494090 FAM186BQ8IYM0 893 aa20.81■□□□□ 0.92
COL27A1-207ENST00000494090 NHEJ1Q9H9Q4 299 aaPredicted RBP20.81■□□□□ 0.92
COL27A1-207ENST00000494090 NCAPD2Q15021 1401 aa20.81■□□□□ 0.92
COL27A1-207ENST00000494090 TET3O43151 1660 aa20.81■□□□□ 0.92
COL27A1-207ENST00000494090 C10orf76Q5T2E6 689 aa20.81■□□□□ 0.92
COL27A1-207ENST00000494090 NAA35Q5VZE5 725 aa20.81■□□□□ 0.92
COL27A1-207ENST00000494090 PARD6BQ9BYG5 372 aa20.81■□□□□ 0.92
COL27A1-207ENST00000494090 TMEM206Q9H813 350 aa20.81■□□□□ 0.92
COL27A1-207ENST00000494090 DMTNQ08495 405 aa20.81■□□□□ 0.92
COL27A1-207ENST00000494090 EPB41L5Q9HCM4 733 aa20.81■□□□□ 0.92
COL27A1-207ENST00000494090 ANKFY1Q9P2R3 1169 aa20.81■□□□□ 0.92
COL27A1-207ENST00000494090 NDUFA10O95299 355 aa20.81■□□□□ 0.92
COL27A1-207ENST00000494090 HINFPQ9BQA5 517 aa20.81■□□□□ 0.92
COL27A1-207ENST00000494090 SERPINB13Q9UIV8 391 aa20.81■□□□□ 0.92
COL27A1-207ENST00000494090 TYW5A2RUC4 315 aaKnown RBP20.8■□□□□ 0.92
COL27A1-207ENST00000494090 PGRMC1O00264 195 aaKnown RBP20.8■□□□□ 0.92
COL27A1-207ENST00000494090 MESDQ14696 234 aa20.8■□□□□ 0.92
COL27A1-207ENST00000494090 SEPT14Q6ZU15 432 aa20.8■□□□□ 0.92
COL27A1-207ENST00000494090 MAGOHBQ96A72 148 aaKnown RBP20.8■□□□□ 0.92
COL27A1-207ENST00000494090 ZNF148Q9UQR1 794 aa20.8■□□□□ 0.92
COL27A1-207ENST00000494090 MYO1FO00160 1098 aa20.8■□□□□ 0.92
COL27A1-207ENST00000494090 LIG3P49916 1009 aa20.8■□□□□ 0.92
COL27A1-207ENST00000494090 KCTD16Q68DU8 428 aa20.8■□□□□ 0.92
COL27A1-207ENST00000494090 TMED8Q6PL24 325 aaPredicted RBP20.8■□□□□ 0.92
COL27A1-207ENST00000494090 QTRT2Q9H974 415 aaKnown RBP20.8■□□□□ 0.92
COL27A1-207ENST00000494090 SEPT9Q9UHD8 586 aaPredicted RBP20.8■□□□□ 0.92
COL27A1-207ENST00000494090 ABL1P00519 1130 aa20.8■□□□□ 0.92
COL27A1-207ENST00000494090 CCT5P48643 541 aa20.8■□□□□ 0.92
COL27A1-207ENST00000494090 ERFEQ4G0M1 354 aa20.8■□□□□ 0.92
COL27A1-207ENST00000494090 ABI1Q8IZP0 508 aa20.8■□□□□ 0.92
COL27A1-207ENST00000494090 UHMK1Q8TAS1 419 aaKnown RBP20.8■□□□□ 0.92
COL27A1-207ENST00000494090 AIFM3Q96NN9 605 aa20.8■□□□□ 0.92
COL27A1-207ENST00000494090 VCX3AQ9NNX9 186 aa20.8■□□□□ 0.92
COL27A1-207ENST00000494090 HIP1RO75146 1068 aa20.8■□□□□ 0.92
COL27A1-207ENST00000494090 PBKQ96KB5 322 aa20.8■□□□□ 0.92
COL27A1-207ENST00000494090 DAAM1Q9Y4D1 1078 aa20.8■□□□□ 0.92
COL27A1-207ENST00000494090 ITKQ08881 620 aa20.8■□□□□ 0.92
COL27A1-207ENST00000494090 TRPM1Q7Z4N2 1603 aa20.79■□□□□ 0.92
COL27A1-207ENST00000494090 SRGAP2BP0DMP2 458 aa20.79■□□□□ 0.92
COL27A1-207ENST00000494090 METTL23Q86XA0 190 aa20.79■□□□□ 0.92
COL27A1-207ENST00000494090 SPDYE16A6NNV3 312 aaPredicted RBP20.79■□□□□ 0.92
COL27A1-207ENST00000494090 BMP3P12645 472 aa20.79■□□□□ 0.92
COL27A1-207ENST00000494090 SLC8A1P32418 973 aa20.79■□□□□ 0.92
COL27A1-207ENST00000494090 SPDYE2Q495Y8 402 aa20.79■□□□□ 0.92
COL27A1-207ENST00000494090 TCP11X2Q5H9J9 407 aa20.79■□□□□ 0.92
COL27A1-207ENST00000494090 ZNF233A6NK53 670 aa20.79■□□□□ 0.92
COL27A1-207ENST00000494090 PHLDB3Q6NSJ2 640 aa20.79■□□□□ 0.92
COL27A1-207ENST00000494090 NME8Q8N427 588 aa20.79■□□□□ 0.92
COL27A1-207ENST00000494090 MIPOL1Q8TD10 442 aa20.79■□□□□ 0.92
COL27A1-207ENST00000494090 NCAPGQ9BPX3 1015 aa20.79■□□□□ 0.92
COL27A1-207ENST00000494090 CPSF2Q9P2I0 782 aaKnown RBP20.79■□□□□ 0.92
COL27A1-207ENST00000494090 WDR46O15213 610 aaKnown RBP20.79■□□□□ 0.92
COL27A1-207ENST00000494090 EIF4A3P38919 411 aaKnown RBP20.79■□□□□ 0.92
COL27A1-207ENST00000494090 RASGRF1Q13972 1273 aa20.79■□□□□ 0.92
COL27A1-207ENST00000494090 STRBPQ96SI9 672 aaKnown RBP20.79■□□□□ 0.92
COL27A1-207ENST00000494090 SH3GLB2Q9NR46 395 aa20.79■□□□□ 0.92
COL27A1-207ENST00000494090 NPHP4O75161 1426 aaPredicted RBP20.78■□□□□ 0.92
COL27A1-207ENST00000494090 SERPING1P05155 500 aa20.78■□□□□ 0.92
COL27A1-207ENST00000494090 CLCN6P51797 869 aa20.78■□□□□ 0.92
COL27A1-207ENST00000494090 ARMC9Q7Z3E5 817 aa20.78■□□□□ 0.92
COL27A1-207ENST00000494090 FAN1Q9Y2M0 1017 aa20.78■□□□□ 0.92
COL27A1-207ENST00000494090 ATP1A3P13637 1013 aa20.78■□□□□ 0.92
COL27A1-207ENST00000494090 PLCG1P19174 1290 aa20.78■□□□□ 0.92
COL27A1-207ENST00000494090 CCND2P30279 289 aa20.78■□□□□ 0.92
COL27A1-207ENST00000494090 MAP2K2P36507 400 aa20.78■□□□□ 0.92
COL27A1-207ENST00000494090 FAM160B2Q86V87 743 aa20.78■□□□□ 0.92
COL27A1-207ENST00000494090 C2orf54Q08AI8 447 aa20.78■□□□□ 0.92
COL27A1-207ENST00000494090 KCTD1Q719H9 257 aa20.78■□□□□ 0.92
COL27A1-207ENST00000494090 SPZ1Q9BXG8 430 aa20.78■□□□□ 0.92
COL27A1-207ENST00000494090 INTS9Q9NV88 658 aaKnown RBP20.78■□□□□ 0.92
COL27A1-207ENST00000494090 GOLGA8QA0A0J9YX86 632 aa20.78■□□□□ 0.92
COL27A1-207ENST00000494090 GOLGA8OA6NCC3 632 aa20.78■□□□□ 0.92
COL27A1-207ENST00000494090 GOLGA8NF8WBI6 632 aa20.78■□□□□ 0.92
COL27A1-207ENST00000494090 MOCS3O95396 460 aa20.78■□□□□ 0.92
COL27A1-207ENST00000494090 SESTD1Q86VW0 696 aa20.78■□□□□ 0.92
COL27A1-207ENST00000494090 TTLL11Q8NHH1 800 aa20.78■□□□□ 0.92
COL27A1-207ENST00000494090 CDC25AP30304 524 aa20.77■□□□□ 0.92
COL27A1-207ENST00000494090 IGBP1P78318 339 aa20.77■□□□□ 0.92
COL27A1-207ENST00000494090 DISC1Q9NRI5 854 aa20.77■□□□□ 0.92
COL27A1-207ENST00000494090 PCDHA13Q9Y5I0 950 aa20.77■□□□□ 0.92
COL27A1-207ENST00000494090 WDR19Q8NEZ3 1342 aa20.77■□□□□ 0.92
COL27A1-207ENST00000494090 RFX7Q2KHR2 1363 aa20.77■□□□□ 0.92
COL27A1-207ENST00000494090 MAP3K4Q9Y6R4 1608 aa20.77■□□□□ 0.92
COL27A1-207ENST00000494090 KRT3P12035 628 aa20.77■□□□□ 0.92
COL27A1-207ENST00000494090 EMILIN3Q9NT22 766 aa20.77■□□□□ 0.92
COL27A1-207ENST00000494090 PCDHB4Q9Y5E5 795 aa20.77■□□□□ 0.92
COL27A1-207ENST00000494090 HECW2Q9P2P5 1572 aa20.77■□□□□ 0.92
COL27A1-207ENST00000494090 IQGAP3Q86VI3 1631 aa20.77■□□□□ 0.92
COL27A1-207ENST00000494090 KIF3CO14782 793 aa20.77■□□□□ 0.92
COL27A1-207ENST00000494090 MFAP3LO75121 409 aa20.77■□□□□ 0.92
COL27A1-207ENST00000494090 ZMYND10O75800 440 aa20.77■□□□□ 0.92
COL27A1-207ENST00000494090 LRRC63Q05C16 580 aa20.77■□□□□ 0.92
COL27A1-207ENST00000494090 KRT31Q15323 416 aa20.77■□□□□ 0.92
COL27A1-207ENST00000494090 CCDC93Q567U6 631 aa20.77■□□□□ 0.92
COL27A1-207ENST00000494090 MB21D1Q8N884 522 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms