RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 STARD7Q9NQZ5 370 aa8.88□□□□□ -0.99
RBM39-238ENST00000493853 RNF146Q9NTX7 359 aa8.88□□□□□ -0.99
RBM39-238ENST00000493853 TMEM39AQ9NV64 488 aa8.88□□□□□ -0.99
RBM39-238ENST00000493853 ANAPC4Q9UJX5 808 aa8.88□□□□□ -0.99
RBM39-238ENST00000493853 DOLKQ9UPQ8 538 aa8.88□□□□□ -0.99
RBM39-238ENST00000493853 PLXNB2O15031 1838 aa8.88□□□□□ -0.99
RBM39-238ENST00000493853 SALL3Q9BXA9 1300 aa8.87□□□□□ -0.99
RBM39-238ENST00000493853 CEP290O15078 2479 aa8.87□□□□□ -0.99
RBM39-238ENST00000493853 A0A1W2PQ45 241 aaPredicted RBP8.87□□□□□ -0.99
RBM39-238ENST00000493853 A0A1W2PQY0 241 aa8.87□□□□□ -0.99
RBM39-238ENST00000493853 ORC4O43929 436 aa8.87□□□□□ -0.99
RBM39-238ENST00000493853 TRAK2O60296 914 aa8.87□□□□□ -0.99
RBM39-238ENST00000493853 NMT2O60551 498 aa8.87□□□□□ -0.99
RBM39-238ENST00000493853 PLA2G6O60733 806 aa8.87□□□□□ -0.99
RBM39-238ENST00000493853 CLTBP09497 229 aa8.87□□□□□ -0.99
RBM39-238ENST00000493853 RHOQP17081 205 aa8.87□□□□□ -0.99
RBM39-238ENST00000493853 GPC1P35052 558 aa8.87□□□□□ -0.99
RBM39-238ENST00000493853 ACLYP53396 1101 aa8.87□□□□□ -0.99
RBM39-238ENST00000493853 NMIQ13287 307 aaPredicted RBP8.87□□□□□ -0.99
RBM39-238ENST00000493853 KCNA10Q16322 511 aa8.87□□□□□ -0.99
RBM39-238ENST00000493853 CCDC144BQ3MJ40 725 aa8.87□□□□□ -0.99
RBM39-238ENST00000493853 GNASQ5JWF2 1037 aa8.87□□□□□ -0.99
RBM39-238ENST00000493853 C1orf53Q5VUE5 145 aa8.87□□□□□ -0.99
RBM39-238ENST00000493853 NSMFQ6X4W1 530 aa8.87□□□□□ -0.99
RBM39-238ENST00000493853 MFSD6Q6ZSS7 791 aa8.87□□□□□ -0.99
RBM39-238ENST00000493853 Q7L0L9 218 aa8.87□□□□□ -0.99
RBM39-238ENST00000493853 CCDC144CPQ8IYA2 1237 aa8.87□□□□□ -0.99
RBM39-238ENST00000493853 DCAF4Q8WV16 495 aa8.87□□□□□ -0.99
RBM39-238ENST00000493853 LENG1Q96BZ8 264 aaPredicted RBP8.87□□□□□ -0.99
RBM39-238ENST00000493853 GLT1D1Q96MS3 346 aa8.87□□□□□ -0.99
RBM39-238ENST00000493853 IL17RBQ9NRM6 502 aa8.87□□□□□ -0.99
RBM39-238ENST00000493853 CCPG1Q9ULG6 757 aa8.87□□□□□ -0.99
RBM39-238ENST00000493853 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.87□□□□□ -0.99
RBM39-238ENST00000493853 TRIOBPQ9H2D6 2365 aa8.87□□□□□ -0.99
RBM39-238ENST00000493853 PLIN4Q96Q06 1357 aa8.86□□□□□ -0.99
RBM39-238ENST00000493853 SYNRGQ9UMZ2 1314 aa8.86□□□□□ -0.99
RBM39-238ENST00000493853 A0A0D9SFI3 127 aa8.86□□□□□ -0.99
RBM39-238ENST00000493853 CDC14CA4D256 554 aa8.86□□□□□ -0.99
RBM39-238ENST00000493853 TRIM43BA6NCK2 446 aa8.86□□□□□ -0.99
RBM39-238ENST00000493853 ZNF213O14771 459 aa8.86□□□□□ -0.99
RBM39-238ENST00000493853 HSPD1P10809 573 aaKnown RBP8.86□□□□□ -0.99
RBM39-238ENST00000493853 TOP1P11387 765 aaKnown RBP8.86□□□□□ -0.99
RBM39-238ENST00000493853 SNAP25P60880 206 aa8.86□□□□□ -0.99
RBM39-238ENST00000493853 HAND2P61296 217 aa8.86□□□□□ -0.99
RBM39-238ENST00000493853 CNTN2Q02246 1040 aa8.86□□□□□ -0.99
RBM39-238ENST00000493853 TNFAIP2Q03169 654 aa8.86□□□□□ -0.99
RBM39-238ENST00000493853 USP4Q13107 963 aa8.86□□□□□ -0.99
RBM39-238ENST00000493853 CLN3Q13286 438 aa8.86□□□□□ -0.99
RBM39-238ENST00000493853 SNX17Q15036 470 aa8.86□□□□□ -0.99
RBM39-238ENST00000493853 SHHQ15465 462 aa8.86□□□□□ -0.99
RBM39-238ENST00000493853 TSGA10IPQ3SY00 556 aa8.86□□□□□ -0.99
RBM39-238ENST00000493853 CHD1LQ86WJ1 897 aa8.86□□□□□ -0.99
RBM39-238ENST00000493853 PHTF2Q8N3S3 785 aa8.86□□□□□ -0.99
RBM39-238ENST00000493853 ZSCAN1Q8NBB4 408 aa8.86□□□□□ -0.99
RBM39-238ENST00000493853 TRIM43Q96BQ3 446 aaPredicted RBP8.86□□□□□ -0.99
RBM39-238ENST00000493853 AP5M1Q9H0R1 490 aa8.86□□□□□ -0.99
RBM39-238ENST00000493853 RNF41Q9H4P4 317 aaPredicted RBP8.86□□□□□ -0.99
RBM39-238ENST00000493853 PDLIM7Q9NR12 457 aa8.86□□□□□ -0.99
RBM39-238ENST00000493853 RAB6BQ9NRW1 208 aa8.86□□□□□ -0.99
RBM39-238ENST00000493853 DIAPH3Q9NSV4 1193 aa8.86□□□□□ -0.99
RBM39-238ENST00000493853 PRR12Q9ULL5 1215 aa8.86□□□□□ -0.99
RBM39-238ENST00000493853 ELP1O95163 1332 aa8.85□□□□□ -0.99
RBM39-238ENST00000493853 MROH7Q68CQ1 1323 aa8.85□□□□□ -0.99
RBM39-238ENST00000493853 CCDC171Q6TFL3 1326 aa8.85□□□□□ -0.99
RBM39-238ENST00000493853 PTPDC1A2A3K4 754 aa8.85□□□□□ -0.99
RBM39-238ENST00000493853 HIP1O00291 1037 aa8.85□□□□□ -0.99
RBM39-238ENST00000493853 FOXP2O15409 715 aa8.85□□□□□ -0.99
RBM39-238ENST00000493853 TLR3O15455 904 aaKnown RBP8.85□□□□□ -0.99
RBM39-238ENST00000493853 ZEB2O60315 1214 aa8.85□□□□□ -0.99
RBM39-238ENST00000493853 ADAMTS4O75173 837 aa8.85□□□□□ -0.99
RBM39-238ENST00000493853 ASGR1P07306 291 aa8.85□□□□□ -0.99
RBM39-238ENST00000493853 PCP11498 1178 aaKnown RBP8.85□□□□□ -0.99
RBM39-238ENST00000493853 SDSP20132 328 aa8.85□□□□□ -0.99
RBM39-238ENST00000493853 SOX11P35716 441 aa8.85□□□□□ -0.99
RBM39-238ENST00000493853 SLC16A2P36021 539 aa8.85□□□□□ -0.99
RBM39-238ENST00000493853 CCDC178Q5BJE1 867 aa8.85□□□□□ -0.99
RBM39-238ENST00000493853 OXLD1Q5BKU9 147 aa8.85□□□□□ -0.99
RBM39-238ENST00000493853 AKNAD1Q5T1N1 836 aa8.85□□□□□ -0.99
RBM39-238ENST00000493853 SYDE2Q5VT97 1194 aa8.85□□□□□ -0.99
RBM39-238ENST00000493853 SMC5Q8IY18 1101 aa8.85□□□□□ -0.99
RBM39-238ENST00000493853 VWA5B2Q8N398 1253 aa8.85□□□□□ -0.99
RBM39-238ENST00000493853 FAM133AQ8N9E0 248 aa8.85□□□□□ -0.99
RBM39-238ENST00000493853 KLHDC9Q8NEP7 349 aa8.85□□□□□ -0.99
RBM39-238ENST00000493853 ESR2Q92731 530 aa8.85□□□□□ -0.99
RBM39-238ENST00000493853 FAM161BQ96MY7 647 aa8.85□□□□□ -0.99
RBM39-238ENST00000493853 TTC14Q96N46 770 aa8.85□□□□□ -0.99
RBM39-238ENST00000493853 TOX2Q96NM4 488 aa8.85□□□□□ -0.99
RBM39-238ENST00000493853 MPHOSPH6Q99547 160 aaKnown RBP8.85□□□□□ -0.99
RBM39-238ENST00000493853 TMEM47Q9BQJ4 181 aa8.85□□□□□ -0.99
RBM39-238ENST00000493853 A1CFQ9NQ94 594 aaKnown RBP8.85□□□□□ -0.99
RBM39-238ENST00000493853 TCP11L1Q9NUJ3 509 aa8.85□□□□□ -0.99
RBM39-238ENST00000493853 MTMR10Q9NXD2 777 aa8.85□□□□□ -0.99
RBM39-238ENST00000493853 ADD3Q9UEY8 706 aaKnown RBP8.85□□□□□ -0.99
RBM39-238ENST00000493853 PNMA2Q9UL42 364 aa8.85□□□□□ -0.99
RBM39-238ENST00000493853 ZNF536O15090 1300 aa8.84□□□□□ -0.99
RBM39-238ENST00000493853 BAZ2AQ9UIF9 1905 aaKnown RBP8.84□□□□□ -0.99
RBM39-238ENST00000493853 A0A0U1RQG5 324 aaPredicted RBP8.84□□□□□ -0.99
RBM39-238ENST00000493853 KIAA0355O15063 1070 aa8.84□□□□□ -0.99
RBM39-238ENST00000493853 DYNC1LI2O43237 492 aaPredicted RBP8.84□□□□□ -0.99
RBM39-238ENST00000493853 ICAM1P05362 532 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms