RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 C7orf31Q8N865 590 aa6.48□□□□□ -1.37
SEC13-219ENST00000492602 KLHL23Q8NBE8 558 aa6.48□□□□□ -1.37
SEC13-219ENST00000492602 P2RX5Q93086 422 aa6.48□□□□□ -1.37
SEC13-219ENST00000492602 PURBQ96QR8 312 aaKnown RBP6.48□□□□□ -1.37
SEC13-219ENST00000492602 POMKQ9H5K3 350 aa6.48□□□□□ -1.37
SEC13-219ENST00000492602 PRKRIP1Q9H875 184 aaPredicted RBP6.48□□□□□ -1.37
SEC13-219ENST00000492602 KANSL2Q9H9L4 492 aa6.48□□□□□ -1.37
SEC13-219ENST00000492602 PIH1D3Q9NQM4 214 aaKnown RBP6.48□□□□□ -1.37
SEC13-219ENST00000492602 RNF146Q9NTX7 359 aa6.48□□□□□ -1.37
SEC13-219ENST00000492602 HDAC6Q9UBN7 1215 aa6.48□□□□□ -1.37
SEC13-219ENST00000492602 NAV2Q8IVL1 2488 aa6.47□□□□□ -1.37
SEC13-219ENST00000492602 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.47□□□□□ -1.37
SEC13-219ENST00000492602 F5H6K3 240 aa6.47□□□□□ -1.37
SEC13-219ENST00000492602 NKRFO15226 690 aaKnown RBP eCLIP6.47□□□□□ -1.37
SEC13-219ENST00000492602 DCNP07585 359 aaKnown RBP6.47□□□□□ -1.37
SEC13-219ENST00000492602 MMP3P08254 477 aa6.47□□□□□ -1.37
SEC13-219ENST00000492602 UBTFL1P0CB47 393 aaPredicted RBP6.47□□□□□ -1.37
SEC13-219ENST00000492602 ZAP70P43403 619 aa6.47□□□□□ -1.37
SEC13-219ENST00000492602 KLRC3Q07444 240 aa6.47□□□□□ -1.37
SEC13-219ENST00000492602 TBC1D8BQ0IIM8 1120 aa6.47□□□□□ -1.37
SEC13-219ENST00000492602 DUSP6Q16828 381 aa6.47□□□□□ -1.37
SEC13-219ENST00000492602 NAALADL2Q58DX5 795 aa6.47□□□□□ -1.37
SEC13-219ENST00000492602 N4BP2L1Q5TBK1 243 aaPredicted RBP6.47□□□□□ -1.37
SEC13-219ENST00000492602 LLGL2Q6P1M3 1020 aa6.47□□□□□ -1.37
SEC13-219ENST00000492602 SYCE2Q6PIF2 218 aa6.47□□□□□ -1.37
SEC13-219ENST00000492602 UNQ6494/PRO21346Q6UXR6 183 aa6.47□□□□□ -1.37
SEC13-219ENST00000492602 LURAP1LQ8IV03 231 aa6.47□□□□□ -1.37
SEC13-219ENST00000492602 C1orf210Q8IVY1 113 aa6.47□□□□□ -1.37
SEC13-219ENST00000492602 LRRC47Q8N1G4 583 aaKnown RBP6.47□□□□□ -1.37
SEC13-219ENST00000492602 TDRD5Q8NAT2 981 aaKnown RBP6.47□□□□□ -1.37
SEC13-219ENST00000492602 NETO1Q8TDF5 533 aa6.47□□□□□ -1.37
SEC13-219ENST00000492602 MORC4Q8TE76 937 aa6.47□□□□□ -1.37
SEC13-219ENST00000492602 CCDC17Q96LX7 622 aa6.47□□□□□ -1.37
SEC13-219ENST00000492602 TRERF1Q96PN7 1200 aa6.47□□□□□ -1.37
SEC13-219ENST00000492602 ALG1Q9BT22 464 aa6.47□□□□□ -1.37
SEC13-219ENST00000492602 IL16Q14005 1332 aa6.47□□□□□ -1.37
SEC13-219ENST00000492602 FRYQ5TBA9 3013 aa6.47□□□□□ -1.37
SEC13-219ENST00000492602 RBM47A0AV96 593 aaKnown RBP6.46□□□□□ -1.38
SEC13-219ENST00000492602 FSD2A1L4K1 749 aa6.46□□□□□ -1.38
SEC13-219ENST00000492602 TAF4O00268 1085 aa6.46□□□□□ -1.38
SEC13-219ENST00000492602 SPTLC1O15269 473 aa6.46□□□□□ -1.38
SEC13-219ENST00000492602 IGSF3O75054 1194 aa6.46□□□□□ -1.38
SEC13-219ENST00000492602 NDUFB10O96000 172 aa6.46□□□□□ -1.38
SEC13-219ENST00000492602 TXNP10599 105 aaKnown RBP6.46□□□□□ -1.38
SEC13-219ENST00000492602 ALAS1P13196 640 aa6.46□□□□□ -1.38
SEC13-219ENST00000492602 TGM1P22735 817 aa6.46□□□□□ -1.38
SEC13-219ENST00000492602 CCDC158Q5M9N0 1113 aa6.46□□□□□ -1.38
SEC13-219ENST00000492602 CES5AQ6NT32 575 aa6.46□□□□□ -1.38
SEC13-219ENST00000492602 NSMFQ6X4W1 530 aa6.46□□□□□ -1.38
SEC13-219ENST00000492602 DHX37Q8IY37 1157 aaKnown RBP6.46□□□□□ -1.38
SEC13-219ENST00000492602 ZDHHC14Q8IZN3 488 aa6.46□□□□□ -1.38
SEC13-219ENST00000492602 PLCD3Q8N3E9 789 aa6.46□□□□□ -1.38
SEC13-219ENST00000492602 SDR42E1Q8WUS8 393 aa6.46□□□□□ -1.38
SEC13-219ENST00000492602 AFG1LQ8WV93 481 aa6.46□□□□□ -1.38
SEC13-219ENST00000492602 KAT2BQ92831 832 aa6.46□□□□□ -1.38
SEC13-219ENST00000492602 NECTIN4Q96NY8 510 aa6.46□□□□□ -1.38
SEC13-219ENST00000492602 CDCA3Q99618 268 aaPredicted RBP6.46□□□□□ -1.38
SEC13-219ENST00000492602 RC3H2Q9HBD1 1191 aaKnown RBP6.46□□□□□ -1.38
SEC13-219ENST00000492602 PARD6AQ9NPB6 346 aa6.46□□□□□ -1.38
SEC13-219ENST00000492602 CYP39A1Q9NYL5 469 aa6.46□□□□□ -1.38
SEC13-219ENST00000492602 SMG5Q9UPR3 1016 aaKnown RBP6.46□□□□□ -1.38
SEC13-219ENST00000492602 MRPL42Q9Y6G3 142 aaKnown RBP6.46□□□□□ -1.38
SEC13-219ENST00000492602 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.46□□□□□ -1.38
SEC13-219ENST00000492602 ZZEF1O43149 2961 aa6.46□□□□□ -1.38
SEC13-219ENST00000492602 POTEMA6NI47 508 aa6.45□□□□□ -1.38
SEC13-219ENST00000492602 SRRM3A6NNA2 597 aaPredicted RBP6.45□□□□□ -1.38
SEC13-219ENST00000492602 CFHP08603 1231 aa6.45□□□□□ -1.38
SEC13-219ENST00000492602 CTSHP09668 335 aa6.45□□□□□ -1.38
SEC13-219ENST00000492602 HOXB8P17481 243 aaPredicted RBP6.45□□□□□ -1.38
SEC13-219ENST00000492602 CASTP20810 708 aaKnown RBP6.45□□□□□ -1.38
SEC13-219ENST00000492602 CDK8P49336 464 aa6.45□□□□□ -1.38
SEC13-219ENST00000492602 PSEN2P49810 448 aa6.45□□□□□ -1.38
SEC13-219ENST00000492602 ALDH5A1P51649 535 aaPredicted RBP6.45□□□□□ -1.38
SEC13-219ENST00000492602 SPEM2Q0P670 501 aa6.45□□□□□ -1.38
SEC13-219ENST00000492602 TDGQ13569 410 aa6.45□□□□□ -1.38
SEC13-219ENST00000492602 TKFCQ3LXA3 575 aa6.45□□□□□ -1.38
SEC13-219ENST00000492602 POTEGQ6S5H5 508 aa6.45□□□□□ -1.38
SEC13-219ENST00000492602 TMEM184AQ6ZMB5 413 aa6.45□□□□□ -1.38
SEC13-219ENST00000492602 PRR23BQ6ZRT6 265 aa6.45□□□□□ -1.38
SEC13-219ENST00000492602 KDF1Q8NAX2 398 aaPredicted RBP6.45□□□□□ -1.38
SEC13-219ENST00000492602 SCFD2Q8WU76 684 aa6.45□□□□□ -1.38
SEC13-219ENST00000492602 ATRIPQ8WXE1 791 aa6.45□□□□□ -1.38
SEC13-219ENST00000492602 DDX1Q92499 740 aaKnown RBP6.45□□□□□ -1.38
SEC13-219ENST00000492602 APBB2Q92870 758 aa6.45□□□□□ -1.38
SEC13-219ENST00000492602 ZNF689Q96CS4 500 aaPredicted RBP6.45□□□□□ -1.38
SEC13-219ENST00000492602 BORCS6Q96GS4 357 aa6.45□□□□□ -1.38
SEC13-219ENST00000492602 RIOK1Q9BRS2 568 aaKnown RBP6.45□□□□□ -1.38
SEC13-219ENST00000492602 OSBPL7Q9BZF2 842 aa6.45□□□□□ -1.38
SEC13-219ENST00000492602 CRNKL1Q9BZJ0 848 aaKnown RBP6.45□□□□□ -1.38
SEC13-219ENST00000492602 ADD3Q9UEY8 706 aaKnown RBP6.45□□□□□ -1.38
SEC13-219ENST00000492602 FEM1BQ9UK73 627 aa6.45□□□□□ -1.38
SEC13-219ENST00000492602 GMEB2Q9UKD1 530 aa6.45□□□□□ -1.38
SEC13-219ENST00000492602 ISY1Q9ULR0 285 aaKnown RBP6.45□□□□□ -1.38
SEC13-219ENST00000492602 DUSP12Q9UNI6 340 aa6.45□□□□□ -1.38
SEC13-219ENST00000492602 SALL2Q9Y467 1007 aaPredicted RBP6.45□□□□□ -1.38
SEC13-219ENST00000492602 CEP295Q9C0D2 2601 aa6.45□□□□□ -1.38
SEC13-219ENST00000492602 MAGEB6P1A0A0J9YX57 407 aa6.44□□□□□ -1.38
SEC13-219ENST00000492602 KRBA1A5PL33 1030 aa6.44□□□□□ -1.38
SEC13-219ENST00000492602 WEE2P0C1S8 567 aa6.44□□□□□ -1.38
SEC13-219ENST00000492602 PDE4DQ08499 809 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms