RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 TSNAXIP1Q2TAA8 658 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 FKBP15Q5T1M5 1219 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 SMYD4Q8IYR2 804 aaPredicted RBP10.62□□□□□ -0.71
VPS8-225ENST00000492449 OR2W6PQ8NHA6 318 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 ASAP3Q8TDY4 903 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 CCDC28BQ9BUN5 200 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 CSRNP2Q9H175 543 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 RANBP17Q9H2T7 1088 aaKnown RBP10.62□□□□□ -0.71
VPS8-225ENST00000492449 RMI1Q9H9A7 625 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 MLXIPQ9HAP2 919 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 COPRSQ9NQ92 184 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 CTTNBP2NLQ9P2B4 639 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 WDR37Q9Y2I8 494 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 RBM47A0AV96 593 aaKnown RBP10.62□□□□□ -0.71
VPS8-225ENST00000492449 TMEM221A6NGB7 291 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 DCDC2CA8MYV0 355 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 TPBGLP0DKB5 382 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 CXCR5P32302 372 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 RFC5P40937 340 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 MAGEA10P43363 369 aaPredicted RBP10.62□□□□□ -0.71
VPS8-225ENST00000492449 EIF4A1P60842 406 aaKnown RBP10.62□□□□□ -0.71
VPS8-225ENST00000492449 TNNC1P63316 161 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 DIXDC1Q155Q3 683 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 NTRK3Q16288 839 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 LRRC34Q8IZ02 419 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 STK32AQ8WU08 396 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 IFIH1Q9BYX4 1025 aaKnown RBP10.62□□□□□ -0.71
VPS8-225ENST00000492449 CYP39A1Q9NYL5 469 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 MAST3O60307 1309 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 FLT4P35916 1363 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 RAD51CO43502 376 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 MMEP08473 750 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 ERVK-9P63128 1117 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 CYP27A1Q02318 531 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 ZRSR2Q15696 482 aaKnown RBP10.62□□□□□ -0.71
VPS8-225ENST00000492449 KSR2Q6VAB6 950 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 ATP8B4Q8TF62 1192 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 NELFBQ8WX92 580 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 YIPF2Q9BWQ6 316 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 ADAM7Q9H2U9 754 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 PREBQ9HCU5 417 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 DLGAP2Q9P1A6 1054 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 SCOCQ9UIL1 159 aa10.62□□□□□ -0.71
VPS8-225ENST00000492449 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.62□□□□□ -0.71
VPS8-225ENST00000492449 NID2Q14112 1375 aa10.61□□□□□ -0.71
VPS8-225ENST00000492449 PEX11AO75192 247 aa10.61□□□□□ -0.71
VPS8-225ENST00000492449 GJB6O95452 261 aa10.61□□□□□ -0.71
VPS8-225ENST00000492449 MMP1P03956 469 aa10.61□□□□□ -0.71
VPS8-225ENST00000492449 Q4G0T1 1027 aa10.61□□□□□ -0.71
VPS8-225ENST00000492449 ZNF658Q5TYW1 1059 aaPredicted RBP10.61□□□□□ -0.71
VPS8-225ENST00000492449 CC2D2BQ6DHV5 1058 aa10.61□□□□□ -0.71
VPS8-225ENST00000492449 KIAA0825Q8IV33 1275 aa10.61□□□□□ -0.71
VPS8-225ENST00000492449 NCOA7Q8NI08 942 aa10.61□□□□□ -0.71
VPS8-225ENST00000492449 CCDC42Q96M95 316 aa10.61□□□□□ -0.71
VPS8-225ENST00000492449 INPP4AQ96PE3 977 aaPredicted RBP10.61□□□□□ -0.71
VPS8-225ENST00000492449 KRT12Q99456 494 aa10.61□□□□□ -0.71
VPS8-225ENST00000492449 OCEL1Q9H607 264 aa10.61□□□□□ -0.71
VPS8-225ENST00000492449 AGPAT5Q9NUQ2 364 aa10.61□□□□□ -0.71
VPS8-225ENST00000492449 NKX1-2Q9UD57 310 aaPredicted RBP10.61□□□□□ -0.71
VPS8-225ENST00000492449 SUN2Q9UH99 717 aa10.61□□□□□ -0.71
VPS8-225ENST00000492449 RPL26L1Q9UNX3 145 aaKnown RBP10.61□□□□□ -0.71
VPS8-225ENST00000492449 USP15Q9Y4E8 981 aaPredicted RBP10.61□□□□□ -0.71
VPS8-225ENST00000492449 CCDC61Q9Y6R9 512 aa10.61□□□□□ -0.71
VPS8-225ENST00000492449 CHN1P15882 459 aa10.61□□□□□ -0.71
VPS8-225ENST00000492449 CCDC15Q0P6D6 951 aa10.61□□□□□ -0.71
VPS8-225ENST00000492449 USP49Q70CQ1 688 aa10.61□□□□□ -0.71
VPS8-225ENST00000492449 DDX46Q7L014 1031 aaKnown RBP10.61□□□□□ -0.71
VPS8-225ENST00000492449 NUDT16Q96DE0 195 aaKnown RBP10.61□□□□□ -0.71
VPS8-225ENST00000492449 PGM2Q96G03 612 aa10.61□□□□□ -0.71
VPS8-225ENST00000492449 MS4A14Q96JA4 679 aa10.61□□□□□ -0.71
VPS8-225ENST00000492449 HAPLN3Q96S86 360 aa10.61□□□□□ -0.71
VPS8-225ENST00000492449 ELAC2Q9BQ52 826 aaKnown RBP10.61□□□□□ -0.71
VPS8-225ENST00000492449 TMEM165Q9HC07 324 aa10.61□□□□□ -0.71
VPS8-225ENST00000492449 MAP3K2Q9Y2U5 619 aa10.61□□□□□ -0.71
VPS8-225ENST00000492449 PALM3A6NDB9 673 aaPredicted RBP10.6□□□□□ -0.71
VPS8-225ENST00000492449 F8VZ95 297 aa10.6□□□□□ -0.71
VPS8-225ENST00000492449 SMAPO00193 183 aa10.6□□□□□ -0.71
VPS8-225ENST00000492449 PDHA1P08559 390 aa10.6□□□□□ -0.71
VPS8-225ENST00000492449 MYBL1P10243 752 aa10.6□□□□□ -0.71
VPS8-225ENST00000492449 METAP2P50579 478 aaKnown RBP eCLIP10.6□□□□□ -0.71
VPS8-225ENST00000492449 PDE6CP51160 858 aa10.6□□□□□ -0.71
VPS8-225ENST00000492449 TRADDQ15628 312 aa10.6□□□□□ -0.71
VPS8-225ENST00000492449 ENOX2Q16206 610 aaKnown RBP10.6□□□□□ -0.71
VPS8-225ENST00000492449 RRAGBQ5VZM2 374 aa10.6□□□□□ -0.71
VPS8-225ENST00000492449 SMYD1Q8NB12 490 aa10.6□□□□□ -0.71
VPS8-225ENST00000492449 RBBP8NLQ8NC74 664 aaPredicted RBP10.6□□□□□ -0.71
VPS8-225ENST00000492449 PHC3Q8NDX5 983 aa10.6□□□□□ -0.71
VPS8-225ENST00000492449 KCNV2Q8TDN2 545 aa10.6□□□□□ -0.71
VPS8-225ENST00000492449 DNAJC9Q8WXX5 260 aa10.6□□□□□ -0.71
VPS8-225ENST00000492449 SEC14L1Q92503 715 aa10.6□□□□□ -0.71
VPS8-225ENST00000492449 AGAP3Q96P47 875 aa10.6□□□□□ -0.71
VPS8-225ENST00000492449 RXFP1Q9HBX9 757 aa10.6□□□□□ -0.71
VPS8-225ENST00000492449 PDP2Q9P2J9 529 aa10.6□□□□□ -0.71
VPS8-225ENST00000492449 FBXL5Q9UKA1 691 aa10.6□□□□□ -0.71
VPS8-225ENST00000492449 PLAGL2Q9UPG8 496 aa10.6□□□□□ -0.71
VPS8-225ENST00000492449 LRCH1Q9Y2L9 728 aa10.6□□□□□ -0.71
VPS8-225ENST00000492449 DIP2CQ9Y2E4 1556 aa10.6□□□□□ -0.71
VPS8-225ENST00000492449 LMO7Q8WWI1 1683 aa10.6□□□□□ -0.71
VPS8-225ENST00000492449 MYH6P13533 1939 aa10.6□□□□□ -0.71
VPS8-225ENST00000492449 SIGLEC16A6NMB1 481 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms