RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 CCDC82Q8N4S0 544 aa14.64□□□□□ -0.07
SEC61A1-206ENST00000491668 PPTC7Q8NI37 304 aa14.64□□□□□ -0.07
SEC61A1-206ENST00000491668 HERVK_113Q902F9 699 aa14.64□□□□□ -0.07
SEC61A1-206ENST00000491668 CDX2Q99626 313 aaPredicted RBP14.64□□□□□ -0.07
SEC61A1-206ENST00000491668 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.63□□□□□ -0.07
SEC61A1-206ENST00000491668 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.63□□□□□ -0.07
SEC61A1-206ENST00000491668 HAS3O00219 553 aa14.63□□□□□ -0.07
SEC61A1-206ENST00000491668 SEC24BO95487 1268 aa14.63□□□□□ -0.07
SEC61A1-206ENST00000491668 GGPS1O95749 300 aa14.63□□□□□ -0.07
SEC61A1-206ENST00000491668 F2P00734 622 aa14.63□□□□□ -0.07
SEC61A1-206ENST00000491668 SUPT20HL2P0C7V6 817 aa14.63□□□□□ -0.07
SEC61A1-206ENST00000491668 ZNF286BP0CG31 522 aa14.63□□□□□ -0.07
SEC61A1-206ENST00000491668 CALM1P0DP23 149 aa14.63□□□□□ -0.07
SEC61A1-206ENST00000491668 CALM2P0DP24 149 aa14.63□□□□□ -0.07
SEC61A1-206ENST00000491668 CALM3P0DP25 149 aa14.63□□□□□ -0.07
SEC61A1-206ENST00000491668 CPA1P15085 419 aa14.63□□□□□ -0.07
SEC61A1-206ENST00000491668 GNAQP50148 359 aa14.63□□□□□ -0.07
SEC61A1-206ENST00000491668 CHMP4BP1P59074 171 aa14.63□□□□□ -0.07
SEC61A1-206ENST00000491668 HIC1Q14526 733 aa14.63□□□□□ -0.07
SEC61A1-206ENST00000491668 DGKDQ16760 1214 aa14.63□□□□□ -0.07
SEC61A1-206ENST00000491668 DHX37Q8IY37 1157 aaKnown RBP14.63□□□□□ -0.07
SEC61A1-206ENST00000491668 DHX38Q92620 1227 aaKnown RBP14.63□□□□□ -0.07
SEC61A1-206ENST00000491668 INPP4AQ96PE3 977 aaPredicted RBP14.63□□□□□ -0.07
SEC61A1-206ENST00000491668 USP26Q9BXU7 913 aa14.63□□□□□ -0.07
SEC61A1-206ENST00000491668 FAM217BQ9NTX9 383 aaPredicted RBP14.63□□□□□ -0.07
SEC61A1-206ENST00000491668 SPATA31C2B4DYI2 1134 aa14.62□□□□□ -0.07
SEC61A1-206ENST00000491668 FGBP02675 491 aa14.62□□□□□ -0.07
SEC61A1-206ENST00000491668 TGFB3P10600 412 aa14.62□□□□□ -0.07
SEC61A1-206ENST00000491668 CASTP20810 708 aaKnown RBP14.62□□□□□ -0.07
SEC61A1-206ENST00000491668 DNAJB2P25686 324 aa14.62□□□□□ -0.07
SEC61A1-206ENST00000491668 GPNMBQ14956 572 aa14.62□□□□□ -0.07
SEC61A1-206ENST00000491668 TYW1BQ6NUM6 668 aa14.62□□□□□ -0.07
SEC61A1-206ENST00000491668 OTOP2Q7RTS6 562 aa14.62□□□□□ -0.07
SEC61A1-206ENST00000491668 C16orf70Q9BSU1 422 aa14.62□□□□□ -0.07
SEC61A1-206ENST00000491668 PBX4Q9BYU1 374 aa14.62□□□□□ -0.07
SEC61A1-206ENST00000491668 RTEL1Q9NZ71 1219 aa14.62□□□□□ -0.07
SEC61A1-206ENST00000491668 HDAC6Q9UBN7 1215 aa14.62□□□□□ -0.07
SEC61A1-206ENST00000491668 SEC63Q9UGP8 760 aaKnown RBP14.62□□□□□ -0.07
SEC61A1-206ENST00000491668 REV3LO60673 3130 aa14.62□□□□□ -0.07
SEC61A1-206ENST00000491668 CNTNAP5Q8WYK1 1306 aa14.62□□□□□ -0.07
SEC61A1-206ENST00000491668 TET1Q8NFU7 2136 aa14.62□□□□□ -0.07
SEC61A1-206ENST00000491668 TANC1Q9C0D5 1861 aa14.61□□□□□ -0.07
SEC61A1-206ENST00000491668 DOCK5Q9H7D0 1870 aa14.61□□□□□ -0.07
SEC61A1-206ENST00000491668 PITPNM1O00562 1244 aa14.61□□□□□ -0.07
SEC61A1-206ENST00000491668 PPFIA4O75335 1185 aa14.61□□□□□ -0.07
SEC61A1-206ENST00000491668 IQCF3P0C7M6 154 aa14.61□□□□□ -0.07
SEC61A1-206ENST00000491668 ICAM3P32942 547 aa14.61□□□□□ -0.07
SEC61A1-206ENST00000491668 HSPA4P34932 840 aa14.61□□□□□ -0.07
SEC61A1-206ENST00000491668 PSEN2P49810 448 aa14.61□□□□□ -0.07
SEC61A1-206ENST00000491668 KRT32Q14532 448 aa14.61□□□□□ -0.07
SEC61A1-206ENST00000491668 GRIN2CQ14957 1233 aa14.61□□□□□ -0.07
SEC61A1-206ENST00000491668 PTGISQ16647 500 aa14.61□□□□□ -0.07
SEC61A1-206ENST00000491668 PCNX4Q63HM2 1172 aa14.61□□□□□ -0.07
SEC61A1-206ENST00000491668 KCNV1Q6PIU1 500 aa14.61□□□□□ -0.07
SEC61A1-206ENST00000491668 PPP4R3CPQ6ZMV5 832 aa14.61□□□□□ -0.07
SEC61A1-206ENST00000491668 WNT8BQ93098 351 aa14.61□□□□□ -0.07
SEC61A1-206ENST00000491668 SPATA33Q96N06 139 aa14.61□□□□□ -0.07
SEC61A1-206ENST00000491668 BACH2Q9BYV9 841 aa14.61□□□□□ -0.07
SEC61A1-206ENST00000491668 PSTPIP2Q9H939 334 aa14.61□□□□□ -0.07
SEC61A1-206ENST00000491668 GTF2IRD1Q9UHL9 959 aa14.61□□□□□ -0.07
SEC61A1-206ENST00000491668 TRIP12Q14669 1992 aaPredicted RBP14.61□□□□□ -0.07
SEC61A1-206ENST00000491668 VCANP13611 3396 aa14.6□□□□□ -0.07
SEC61A1-206ENST00000491668 CDC27P30260 824 aa14.6□□□□□ -0.07
SEC61A1-206ENST00000491668 ZNF200P98182 395 aaPredicted RBP14.6□□□□□ -0.07
SEC61A1-206ENST00000491668 MFSD10Q14728 455 aa14.6□□□□□ -0.07
SEC61A1-206ENST00000491668 UBE2SQ16763 222 aa14.6□□□□□ -0.07
SEC61A1-206ENST00000491668 KIAA0753Q2KHM9 967 aa14.6□□□□□ -0.07
SEC61A1-206ENST00000491668 WWC2Q6AWC2 1192 aa14.6□□□□□ -0.07
SEC61A1-206ENST00000491668 DEFB128Q7Z7B8 93 aa14.6□□□□□ -0.07
SEC61A1-206ENST00000491668 SMARCC2Q8TAQ2 1214 aa14.6□□□□□ -0.07
SEC61A1-206ENST00000491668 MYLIPQ8WY64 445 aa14.6□□□□□ -0.07
SEC61A1-206ENST00000491668 ALG1Q9BT22 464 aa14.6□□□□□ -0.07
SEC61A1-206ENST00000491668 SNX14Q9Y5W7 946 aa14.6□□□□□ -0.07
SEC61A1-206ENST00000491668 GBF1Q92538 1859 aa14.6□□□□□ -0.07
SEC61A1-206ENST00000491668 TMEM265A0A087WTH1 108 aa14.59□□□□□ -0.07
SEC61A1-206ENST00000491668 KLF18A0A0U1RQI7 1052 aa14.59□□□□□ -0.07
SEC61A1-206ENST00000491668 ZBTB43O43298 467 aa14.59□□□□□ -0.07
SEC61A1-206ENST00000491668 STAM2O75886 525 aa14.59□□□□□ -0.07
SEC61A1-206ENST00000491668 ITGB5P18084 799 aa14.59□□□□□ -0.07
SEC61A1-206ENST00000491668 TRIM71Q2Q1W2 868 aaKnown RBP14.59□□□□□ -0.07
SEC61A1-206ENST00000491668 TRAF7Q6Q0C0 670 aa14.59□□□□□ -0.07
SEC61A1-206ENST00000491668 HEATR3Q7Z4Q2 680 aa14.59□□□□□ -0.07
SEC61A1-206ENST00000491668 TIFAQ96CG3 184 aa14.59□□□□□ -0.07
SEC61A1-206ENST00000491668 YBX2Q9Y2T7 364 aaKnown RBP14.59□□□□□ -0.07
SEC61A1-206ENST00000491668 FIBPO43427 364 aa14.58□□□□□ -0.08
SEC61A1-206ENST00000491668 ATP9AO75110 1047 aa14.58□□□□□ -0.08
SEC61A1-206ENST00000491668 LGALS2P05162 132 aa14.58□□□□□ -0.08
SEC61A1-206ENST00000491668 PSMA5P28066 241 aa14.58□□□□□ -0.08
SEC61A1-206ENST00000491668 RBL2Q08999 1139 aa14.58□□□□□ -0.08
SEC61A1-206ENST00000491668 RTN1Q16799 776 aa14.58□□□□□ -0.08
SEC61A1-206ENST00000491668 TCTN1Q2MV58 587 aa14.58□□□□□ -0.08
SEC61A1-206ENST00000491668 GNPTABQ3T906 1256 aa14.58□□□□□ -0.08
SEC61A1-206ENST00000491668 XRRA1Q6P2D8 792 aa14.58□□□□□ -0.08
SEC61A1-206ENST00000491668 METTL7BQ6UX53 244 aa14.58□□□□□ -0.08
SEC61A1-206ENST00000491668 CYFIP1Q7L576 1253 aa14.58□□□□□ -0.08
SEC61A1-206ENST00000491668 RPUSD2Q8IZ73 545 aaKnown RBP14.58□□□□□ -0.08
SEC61A1-206ENST00000491668 C7orf31Q8N865 590 aa14.58□□□□□ -0.08
SEC61A1-206ENST00000491668 SLC17A8Q8NDX2 589 aa14.58□□□□□ -0.08
SEC61A1-206ENST00000491668 CUL5Q93034 780 aa14.58□□□□□ -0.08
SEC61A1-206ENST00000491668 JAKMIP1Q96N16 626 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 151 ms