RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 TMTC3Q6ZXV5 915 aa15.67■□□□□ 0.1
CDK9-204ENST00000491521 FCHSD1Q86WN1 690 aa15.67■□□□□ 0.1
CDK9-204ENST00000491521 TMEM199Q8N511 208 aa15.67■□□□□ 0.1
CDK9-204ENST00000491521 SRBD1Q8N5C6 995 aaKnown RBP15.67■□□□□ 0.1
CDK9-204ENST00000491521 SLC43A3Q8NBI5 491 aa15.67■□□□□ 0.1
CDK9-204ENST00000491521 PHKBQ93100 1093 aa15.67■□□□□ 0.1
CDK9-204ENST00000491521 MTMR8Q96EF0 704 aa15.67■□□□□ 0.1
CDK9-204ENST00000491521 INTS4Q96HW7 963 aaKnown RBP15.67■□□□□ 0.1
CDK9-204ENST00000491521 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.67■□□□□ 0.14e-9■■□□□ 13.7
CDK9-204ENST00000491521 MTG1Q9BT17 334 aaPredicted RBP15.67■□□□□ 0.1
CDK9-204ENST00000491521 SLC26A6Q9BXS9 759 aa15.67■□□□□ 0.1
CDK9-204ENST00000491521 PXMP2Q9NR77 195 aa15.67■□□□□ 0.1
CDK9-204ENST00000491521 TRMT13Q9NUP7 481 aaKnown RBP15.67■□□□□ 0.1
CDK9-204ENST00000491521 NID2Q14112 1375 aa15.66■□□□□ 0.1
CDK9-204ENST00000491521 CYTH3O43739 400 aa15.66■□□□□ 0.1
CDK9-204ENST00000491521 JAK2O60674 1132 aa15.66■□□□□ 0.1
CDK9-204ENST00000491521 IFNAR1P17181 557 aa15.66■□□□□ 0.1
CDK9-204ENST00000491521 HSD17B4P51659 736 aa15.66■□□□□ 0.1
CDK9-204ENST00000491521 TRIM22Q8IYM9 498 aa15.66■□□□□ 0.1
CDK9-204ENST00000491521 FAM184AQ8NB25 1140 aa15.66■□□□□ 0.1
CDK9-204ENST00000491521 NSUN7Q8NE18 718 aaKnown RBP15.66■□□□□ 0.1
CDK9-204ENST00000491521 AFG1LQ8WV93 481 aa15.66■□□□□ 0.1
CDK9-204ENST00000491521 ZFP91Q96JP5 570 aaPredicted RBP15.66■□□□□ 0.1
CDK9-204ENST00000491521 IWS1Q96ST2 819 aa15.66■□□□□ 0.1
CDK9-204ENST00000491521 RIOX1Q9H6W3 641 aa15.66■□□□□ 0.1
CDK9-204ENST00000491521 V9GY48 417 aaPredicted RBP15.66■□□□□ 0.1
CDK9-204ENST00000491521 EYSQ5T1H1 3165 aa15.66■□□□□ 0.1
CDK9-204ENST00000491521 MYH7BA7E2Y1 1941 aa15.65■□□□□ 0.1
CDK9-204ENST00000491521 PNMA6FA0A0J9YX94 578 aa15.65■□□□□ 0.1
CDK9-204ENST00000491521 GCOM1H8Y6P7 765 aaPredicted RBP15.65■□□□□ 0.1
CDK9-204ENST00000491521 CTDNEP1O95476 244 aa15.65■□□□□ 0.1
CDK9-204ENST00000491521 GH1P01241 217 aa15.65■□□□□ 0.1
CDK9-204ENST00000491521 NR3C2P08235 984 aa15.65■□□□□ 0.1
CDK9-204ENST00000491521 POLR2MP0CAP2 368 aa15.65■□□□□ 0.1
CDK9-204ENST00000491521 CYP2C9P11712 490 aa15.65■□□□□ 0.1
CDK9-204ENST00000491521 GJB2P29033 226 aa15.65■□□□□ 0.1
CDK9-204ENST00000491521 NBPF20Q3BBV1 942 aa15.65■□□□□ 0.1
CDK9-204ENST00000491521 IL31RAQ8NI17 732 aa15.65■□□□□ 0.1
CDK9-204ENST00000491521 NOC4LQ9BVI4 516 aaKnown RBP15.65■□□□□ 0.1
CDK9-204ENST00000491521 ORC3Q9UBD5 711 aaPredicted RBP15.65■□□□□ 0.1
CDK9-204ENST00000491521 MRVI1Q9Y6F6 885 aa15.65■□□□□ 0.1
CDK9-204ENST00000491521 A6NJR5 290 aa15.64■□□□□ 0.09
CDK9-204ENST00000491521 EIF3JO75822 258 aaKnown RBP15.64■□□□□ 0.09
CDK9-204ENST00000491521 HMGN5P82970 282 aaKnown RBP15.64■□□□□ 0.09
CDK9-204ENST00000491521 SMAD3P84022 425 aaKnown RBP15.64■□□□□ 0.09
CDK9-204ENST00000491521 NTRK3Q16288 839 aa15.64■□□□□ 0.09
CDK9-204ENST00000491521 TMEM240Q5SV17 173 aa15.64■□□□□ 0.09
CDK9-204ENST00000491521 CCDC62Q6P9F0 684 aa15.64■□□□□ 0.09
CDK9-204ENST00000491521 ZNF365Q70YC5 407 aa15.64■□□□□ 0.09
CDK9-204ENST00000491521 C16orf59Q7L2K0 433 aa15.64■□□□□ 0.09
CDK9-204ENST00000491521 RRP36Q96EU6 259 aaKnown RBP15.64■□□□□ 0.09
CDK9-204ENST00000491521 GUCD1Q96NT3 240 aa15.64■□□□□ 0.09
CDK9-204ENST00000491521 MAF1Q9H063 256 aa15.64■□□□□ 0.09
CDK9-204ENST00000491521 CDH23Q9H251 3354 aa15.64■□□□□ 0.09
CDK9-204ENST00000491521 KIF3AQ9Y496 699 aa15.64■□□□□ 0.09
CDK9-204ENST00000491521 SCN10AQ9Y5Y9 1956 aa15.64■□□□□ 0.09
CDK9-204ENST00000491521 hCG_1642624A0A1W2PR95 340 aa15.63■□□□□ 0.09
CDK9-204ENST00000491521 PRPF3O43395 683 aaKnown RBP15.63■□□□□ 0.09
CDK9-204ENST00000491521 KPNA6O60684 536 aa15.63■□□□□ 0.09
CDK9-204ENST00000491521 MMP3P08254 477 aa15.63■□□□□ 0.09
CDK9-204ENST00000491521 SMARCA1P28370 1054 aa15.63■□□□□ 0.09
CDK9-204ENST00000491521 ARHGAP1Q07960 439 aa15.63■□□□□ 0.09
CDK9-204ENST00000491521 TRAF1Q13077 416 aa15.63■□□□□ 0.09
CDK9-204ENST00000491521 FAM109BQ6ICB4 259 aaPredicted RBP15.63■□□□□ 0.09
CDK9-204ENST00000491521 SLC17A8Q8NDX2 589 aa15.63■□□□□ 0.09
CDK9-204ENST00000491521 SMARCC2Q8TAQ2 1214 aa15.63■□□□□ 0.09
CDK9-204ENST00000491521 SCLYQ96I15 445 aa15.63■□□□□ 0.09
CDK9-204ENST00000491521 PDCD2LQ9BRP1 358 aa15.63■□□□□ 0.09
CDK9-204ENST00000491521 SPZ1Q9BXG8 430 aa15.63■□□□□ 0.09
CDK9-204ENST00000491521 IL23AQ9NPF7 189 aa15.63■□□□□ 0.09
CDK9-204ENST00000491521 SEC63Q9UGP8 760 aaKnown RBP15.63■□□□□ 0.09
CDK9-204ENST00000491521 NOD1Q9Y239 953 aa15.63■□□□□ 0.09
CDK9-204ENST00000491521 STXBP5LQ9Y2K9 1186 aa15.63■□□□□ 0.09
CDK9-204ENST00000491521 GRXCR1A8MXD5 290 aa15.62■□□□□ 0.09
CDK9-204ENST00000491521 CCND2P30279 289 aa15.62■□□□□ 0.09
CDK9-204ENST00000491521 PGM5Q15124 567 aa15.62■□□□□ 0.09
CDK9-204ENST00000491521 PSRC1Q6PGN9 363 aaPredicted RBP15.62■□□□□ 0.09
CDK9-204ENST00000491521 DHX37Q8IY37 1157 aaKnown RBP15.62■□□□□ 0.09
CDK9-204ENST00000491521 WASF1Q92558 559 aa15.62■□□□□ 0.09
CDK9-204ENST00000491521 RNF26Q9BY78 433 aaPredicted RBP15.62■□□□□ 0.09
CDK9-204ENST00000491521 SEZ6LQ9BYH1 1024 aa15.62■□□□□ 0.09
CDK9-204ENST00000491521 WNT8AQ9H1J5 351 aa15.62■□□□□ 0.09
CDK9-204ENST00000491521 DDX41Q9UJV9 622 aaKnown RBP15.62■□□□□ 0.09
CDK9-204ENST00000491521 UNC80Q8N2C7 3258 aa15.62■□□□□ 0.09
CDK9-204ENST00000491521 PRUNE2Q8WUY3 3088 aa15.62■□□□□ 0.09
CDK9-204ENST00000491521 DEXIO95424 95 aa15.61■□□□□ 0.09
CDK9-204ENST00000491521 SUPT20HL2P0C7V6 817 aa15.61■□□□□ 0.09
CDK9-204ENST00000491521 ZNF286BP0CG31 522 aa15.61■□□□□ 0.09
CDK9-204ENST00000491521 FOSBP53539 338 aa15.61■□□□□ 0.09
CDK9-204ENST00000491521 FUT2Q10981 343 aa15.61■□□□□ 0.09
CDK9-204ENST00000491521 OTOP2Q7RTS6 562 aa15.61■□□□□ 0.09
CDK9-204ENST00000491521 DEFB128Q7Z7B8 93 aa15.61■□□□□ 0.09
CDK9-204ENST00000491521 GPKOWQ92917 476 aaPredicted RBP eCLIP15.61■□□□□ 0.092e-6■■□□□ 12.7
CDK9-204ENST00000491521 TTYH1Q9H313 450 aaPredicted RBP15.61■□□□□ 0.09
CDK9-204ENST00000491521 SEMA6BQ9H3T3 888 aa15.61■□□□□ 0.09
CDK9-204ENST00000491521 SCN5AQ14524 2016 aa15.61■□□□□ 0.09
CDK9-204ENST00000491521 CNTNAP5Q8WYK1 1306 aa15.61■□□□□ 0.09
CDK9-204ENST00000491521 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.6■□□□□ 0.09
CDK9-204ENST00000491521 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.6■□□□□ 0.09
CDK9-204ENST00000491521 RGS20O76081 388 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms