RNA–Protein interactions for RNA: ENST00000491382.1

PFDN6-207, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-207ENST00000491382 ICAM3P32942 547 aa18.36■□□□□ 0.53
PFDN6-207ENST00000491382 PSMC6P62333 389 aa18.36■□□□□ 0.53
PFDN6-207ENST00000491382 STK3Q13188 491 aa18.36■□□□□ 0.53
PFDN6-207ENST00000491382 AP3B2Q13367 1082 aa18.36■□□□□ 0.53
PFDN6-207ENST00000491382 SH3RF1Q7Z6J0 888 aa18.36■□□□□ 0.53
PFDN6-207ENST00000491382 FAM126BQ8IXS8 530 aa18.36■□□□□ 0.53
PFDN6-207ENST00000491382 CCDC148Q8NFR7 591 aa18.36■□□□□ 0.53
PFDN6-207ENST00000491382 PPTC7Q8NI37 304 aa18.36■□□□□ 0.53
PFDN6-207ENST00000491382 MLXIPQ9HAP2 919 aa18.36■□□□□ 0.53
PFDN6-207ENST00000491382 C6orf50Q9HD87 102 aa18.36■□□□□ 0.53
PFDN6-207ENST00000491382 SCN10AQ9Y5Y9 1956 aa18.36■□□□□ 0.53
PFDN6-207ENST00000491382 ESYT2A0FGR8 921 aa18.35■□□□□ 0.53
PFDN6-207ENST00000491382 TRIM43BA6NCK2 446 aa18.35■□□□□ 0.53
PFDN6-207ENST00000491382 SEC24BO95487 1268 aa18.35■□□□□ 0.53
PFDN6-207ENST00000491382 GNA11P29992 359 aa18.35■□□□□ 0.53
PFDN6-207ENST00000491382 NEDD9Q14511 834 aa18.35■□□□□ 0.53
PFDN6-207ENST00000491382 PKN1Q16512 942 aa18.35■□□□□ 0.53
PFDN6-207ENST00000491382 CELF3Q5SZQ8 465 aaKnown RBP18.35■□□□□ 0.53
PFDN6-207ENST00000491382 MYSM1Q5VVJ2 828 aa18.35■□□□□ 0.53
PFDN6-207ENST00000491382 MCTP2Q6DN12 878 aa18.35■□□□□ 0.53
PFDN6-207ENST00000491382 TRIM43Q96BQ3 446 aaPredicted RBP18.35■□□□□ 0.53
PFDN6-207ENST00000491382 CDHR1Q96JP9 859 aa18.35■□□□□ 0.53
PFDN6-207ENST00000491382 SPATA33Q96N06 139 aa18.35■□□□□ 0.53
PFDN6-207ENST00000491382 LARP6Q9BRS8 491 aaKnown RBP18.35■□□□□ 0.53
PFDN6-207ENST00000491382 GRIN2DO15399 1336 aa18.34■□□□□ 0.53
PFDN6-207ENST00000491382 SPATA31C2B4DYI2 1134 aa18.34■□□□□ 0.53
PFDN6-207ENST00000491382 CDKL5O76039 1030 aa18.34■□□□□ 0.53
PFDN6-207ENST00000491382 SSRP1Q08945 709 aaKnown RBP18.34■□□□□ 0.53
PFDN6-207ENST00000491382 C8orf34Q49A92 452 aa18.34■□□□□ 0.53
PFDN6-207ENST00000491382 GIMAP8Q8ND71 665 aaPredicted RBP18.34■□□□□ 0.53
PFDN6-207ENST00000491382 GPRASP2Q96D09 838 aa18.34■□□□□ 0.53
PFDN6-207ENST00000491382 KATNAL1Q9BW62 490 aa18.34■□□□□ 0.53
PFDN6-207ENST00000491382 ANO3Q9BYT9 981 aa18.34■□□□□ 0.53
PFDN6-207ENST00000491382 ZMYND12Q9H0C1 365 aa18.34■□□□□ 0.53
PFDN6-207ENST00000491382 SLKQ9H2G2 1235 aaPredicted RBP18.34■□□□□ 0.53
PFDN6-207ENST00000491382 TBX21Q9UL17 535 aa18.34■□□□□ 0.53
PFDN6-207ENST00000491382 DOCK5Q9H7D0 1870 aa18.33■□□□□ 0.53
PFDN6-207ENST00000491382 NOP56O00567 594 aaKnown RBP18.33■□□□□ 0.52
PFDN6-207ENST00000491382 PPFIA4O75335 1185 aa18.33■□□□□ 0.52
PFDN6-207ENST00000491382 DEXIO95424 95 aa18.33■□□□□ 0.52
PFDN6-207ENST00000491382 CD4P01730 458 aa18.33■□□□□ 0.52
PFDN6-207ENST00000491382 AK2P54819 239 aa18.33■□□□□ 0.52
PFDN6-207ENST00000491382 SP2Q02086 613 aa18.33■□□□□ 0.52
PFDN6-207ENST00000491382 FAM47CQ5HY64 1035 aa18.33■□□□□ 0.52
PFDN6-207ENST00000491382 NFRKBQ6P4R8 1299 aa18.33■□□□□ 0.52
PFDN6-207ENST00000491382 TDHQ8IZJ6 230 aa18.33■□□□□ 0.52
PFDN6-207ENST00000491382 BICD2Q8TD16 824 aa18.33■□□□□ 0.52
PFDN6-207ENST00000491382 BADQ92934 168 aa18.33■□□□□ 0.52
PFDN6-207ENST00000491382 SENP7Q9BQF6 1050 aa18.33■□□□□ 0.52
PFDN6-207ENST00000491382 SH3GLB2Q9NR46 395 aa18.33■□□□□ 0.52
PFDN6-207ENST00000491382 MAFGO15525 162 aa18.32■□□□□ 0.52
PFDN6-207ENST00000491382 PPFIA3O75145 1194 aa18.32■□□□□ 0.52
PFDN6-207ENST00000491382 SUPT20HL2P0C7V6 817 aa18.32■□□□□ 0.52
PFDN6-207ENST00000491382 CLK2P49760 499 aaKnown RBP18.32■□□□□ 0.52
PFDN6-207ENST00000491382 NEK4P51957 841 aa18.32■□□□□ 0.52
PFDN6-207ENST00000491382 PTPN11Q06124 597 aaPredicted RBP18.32■□□□□ 0.52
PFDN6-207ENST00000491382 MTMR1Q13613 665 aa18.32■□□□□ 0.52
PFDN6-207ENST00000491382 NBPF20Q3BBV1 942 aa18.32■□□□□ 0.52
PFDN6-207ENST00000491382 HSDL1Q3SXM5 330 aa18.32■□□□□ 0.52
PFDN6-207ENST00000491382 METTL7BQ6UX53 244 aa18.32■□□□□ 0.52
PFDN6-207ENST00000491382 REXO1Q8N1G1 1221 aaKnown RBP18.32■□□□□ 0.52
PFDN6-207ENST00000491382 PCDH10Q9P2E7 1040 aa18.32■□□□□ 0.52
PFDN6-207ENST00000491382 TPCN1Q9ULQ1 816 aa18.32■□□□□ 0.52
PFDN6-207ENST00000491382 SORBS3O60504 671 aa18.31■□□□□ 0.52
PFDN6-207ENST00000491382 B4GALT4O60513 344 aa18.31■□□□□ 0.52
PFDN6-207ENST00000491382 PFKFB2O60825 505 aa18.31■□□□□ 0.52
PFDN6-207ENST00000491382 TIMP1P01033 207 aa18.31■□□□□ 0.52
PFDN6-207ENST00000491382 HOXD8P13378 290 aaPredicted RBP18.31■□□□□ 0.52
PFDN6-207ENST00000491382 SREBF1P36956 1147 aa18.31■□□□□ 0.52
PFDN6-207ENST00000491382 CHMP4BP1P59074 171 aa18.31■□□□□ 0.52
PFDN6-207ENST00000491382 SCRN1Q12765 414 aa18.31■□□□□ 0.52
PFDN6-207ENST00000491382 SEMA3FQ13275 785 aa18.31■□□□□ 0.52
PFDN6-207ENST00000491382 CYFIP1Q7L576 1253 aa18.31■□□□□ 0.52
PFDN6-207ENST00000491382 PGBD1Q96JS3 809 aa18.31■□□□□ 0.52
PFDN6-207ENST00000491382 JADE2Q9NQC1 790 aa18.31■□□□□ 0.52
PFDN6-207ENST00000491382 TMEM260Q9NX78 707 aa18.31■□□□□ 0.52
PFDN6-207ENST00000491382 UBIAD1Q9Y5Z9 338 aa18.31■□□□□ 0.52
PFDN6-207ENST00000491382 F2P00734 622 aa18.3■□□□□ 0.52
PFDN6-207ENST00000491382 ITGB5P18084 799 aa18.3■□□□□ 0.52
PFDN6-207ENST00000491382 ITGB8P26012 769 aa18.3■□□□□ 0.52
PFDN6-207ENST00000491382 FPGSQ05932 587 aa18.3■□□□□ 0.52
PFDN6-207ENST00000491382 JAKMIP3Q5VZ66 844 aa18.3■□□□□ 0.52
PFDN6-207ENST00000491382 FAM177A1Q8N128 213 aaPredicted RBP18.3■□□□□ 0.52
PFDN6-207ENST00000491382 MXRA8Q9BRK3 442 aa18.3■□□□□ 0.52
PFDN6-207ENST00000491382 TRPV6Q9H1D0 765 aa18.3■□□□□ 0.52
PFDN6-207ENST00000491382 HIPK3Q9H422 1215 aa18.3■□□□□ 0.52
PFDN6-207ENST00000491382 VPS54Q9P1Q0 977 aa18.3■□□□□ 0.52
PFDN6-207ENST00000491382 ZNF286BP0CG31 522 aa18.29■□□□□ 0.52
PFDN6-207ENST00000491382 ZNF76P36508 570 aa18.29■□□□□ 0.52
PFDN6-207ENST00000491382 NLRP5P59047 1200 aa18.29■□□□□ 0.52
PFDN6-207ENST00000491382 MFSD5Q6N075 450 aa18.29■□□□□ 0.52
PFDN6-207ENST00000491382 TMEM199Q8N511 208 aa18.29■□□□□ 0.52
PFDN6-207ENST00000491382 C7orf31Q8N865 590 aa18.29■□□□□ 0.52
PFDN6-207ENST00000491382 KAT2BQ92831 832 aa18.29■□□□□ 0.52
PFDN6-207ENST00000491382 PPP1R12CQ9BZL4 782 aa18.29■□□□□ 0.52
PFDN6-207ENST00000491382 UPF2Q9HAU5 1272 aaKnown RBP18.29■□□□□ 0.52
PFDN6-207ENST00000491382 TRMT13Q9NUP7 481 aaKnown RBP18.29■□□□□ 0.52
PFDN6-207ENST00000491382 NOD1Q9Y239 953 aa18.29■□□□□ 0.52
PFDN6-207ENST00000491382 STK36Q9NRP7 1315 aa18.28■□□□□ 0.52
PFDN6-207ENST00000491382 SLC34A2O95436 690 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms