RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 MYSM1Q5VVJ2 828 aa20.61■□□□□ 0.89
YIPF3-208ENST00000490447 DHX38Q92620 1227 aaKnown RBP20.61■□□□□ 0.89
YIPF3-208ENST00000490447 PIGSQ96S52 555 aa20.61■□□□□ 0.89
YIPF3-208ENST00000490447 MTCH2Q9Y6C9 303 aa20.61■□□□□ 0.89
YIPF3-208ENST00000490447 KIAA1217Q5T5P2 1943 aa20.61■□□□□ 0.89
YIPF3-208ENST00000490447 REV3LO60673 3130 aa20.6■□□□□ 0.89
YIPF3-208ENST00000490447 PPFIA4O75335 1185 aa20.6■□□□□ 0.89
YIPF3-208ENST00000490447 POU3F3P20264 500 aaPredicted RBP20.6■□□□□ 0.89
YIPF3-208ENST00000490447 WTAPQ15007 396 aa20.6■□□□□ 0.89
YIPF3-208ENST00000490447 CELF3Q5SZQ8 465 aaKnown RBP20.6■□□□□ 0.89
YIPF3-208ENST00000490447 VSIG10LQ86VR7 867 aa20.6■□□□□ 0.89
YIPF3-208ENST00000490447 FCHSD1Q86WN1 690 aa20.6■□□□□ 0.89
YIPF3-208ENST00000490447 NCOA7Q8NI08 942 aa20.6■□□□□ 0.89
YIPF3-208ENST00000490447 MLXIPQ9HAP2 919 aa20.6■□□□□ 0.89
YIPF3-208ENST00000490447 HAS3O00219 553 aa20.59■□□□□ 0.89
YIPF3-208ENST00000490447 EFCAB14O75071 495 aa20.59■□□□□ 0.89
YIPF3-208ENST00000490447 RGS20O76081 388 aa20.59■□□□□ 0.89
YIPF3-208ENST00000490447 CXCL10P02778 98 aa20.59■□□□□ 0.89
YIPF3-208ENST00000490447 CYP21A2P08686 494 aa20.59■□□□□ 0.89
YIPF3-208ENST00000490447 TGFB3P10600 412 aa20.59■□□□□ 0.89
YIPF3-208ENST00000490447 PDE4AP27815 886 aa20.59■□□□□ 0.89
YIPF3-208ENST00000490447 HSDL1Q3SXM5 330 aa20.59■□□□□ 0.89
YIPF3-208ENST00000490447 RIOX1Q9H6W3 641 aa20.59■□□□□ 0.89
YIPF3-208ENST00000490447 PNMA6FA0A0J9YX94 578 aa20.58■□□□□ 0.89
YIPF3-208ENST00000490447 ABHD14A-ACY1A0A1B0GW23 586 aa20.58■□□□□ 0.89
YIPF3-208ENST00000490447 EPOPA6NHQ4 379 aa20.58■□□□□ 0.89
YIPF3-208ENST00000490447 NBNO60934 754 aa20.58■□□□□ 0.89
YIPF3-208ENST00000490447 UBA1P22314 1058 aaKnown RBP20.58■□□□□ 0.89
YIPF3-208ENST00000490447 IKBKEQ14164 716 aa20.58■□□□□ 0.89
YIPF3-208ENST00000490447 GNPTABQ3T906 1256 aa20.58■□□□□ 0.89
YIPF3-208ENST00000490447 CATIPQ7Z7H3 387 aa20.58■□□□□ 0.89
YIPF3-208ENST00000490447 E7EWF7 191 aa20.57■□□□□ 0.88
YIPF3-208ENST00000490447 NOP56O00567 594 aaKnown RBP20.57■□□□□ 0.88
YIPF3-208ENST00000490447 ARHGEF15O94989 841 aa20.57■□□□□ 0.88
YIPF3-208ENST00000490447 HOXD8P13378 290 aaPredicted RBP20.57■□□□□ 0.88
YIPF3-208ENST00000490447 CHMLP26374 656 aa20.57■□□□□ 0.88
YIPF3-208ENST00000490447 DEFB103AP81534 67 aa20.57■□□□□ 0.88
YIPF3-208ENST00000490447 TFF2Q03403 129 aa20.57■□□□□ 0.88
YIPF3-208ENST00000490447 PTH1RQ03431 593 aa20.57■□□□□ 0.88
YIPF3-208ENST00000490447 GPNMBQ14956 572 aa20.57■□□□□ 0.88
YIPF3-208ENST00000490447 ZNF618Q5T7W0 954 aa20.57■□□□□ 0.88
YIPF3-208ENST00000490447 IL31RAQ8NI17 732 aa20.57■□□□□ 0.88
YIPF3-208ENST00000490447 EMSYQ7Z589 1322 aa20.57■□□□□ 0.88
YIPF3-208ENST00000490447 ZNF200P98182 395 aaPredicted RBP20.56■□□□□ 0.88
YIPF3-208ENST00000490447 TMCO2Q7Z6W1 182 aaPredicted RBP20.56■□□□□ 0.88
YIPF3-208ENST00000490447 ZFP91Q96JP5 570 aaPredicted RBP20.56■□□□□ 0.88
YIPF3-208ENST00000490447 RAD9AQ99638 391 aa20.56■□□□□ 0.88
YIPF3-208ENST00000490447 COG5Q9UP83 839 aa20.56■□□□□ 0.88
YIPF3-208ENST00000490447 C17orf102A2RUQ5 167 aa20.55■□□□□ 0.88
YIPF3-208ENST00000490447 LCHNA4D1U4 455 aa20.55■□□□□ 0.88
YIPF3-208ENST00000490447 CYTH3O43739 400 aa20.55■□□□□ 0.88
YIPF3-208ENST00000490447 STAM2O75886 525 aa20.55■□□□□ 0.88
YIPF3-208ENST00000490447 GJB5O95377 273 aa20.55■□□□□ 0.88
YIPF3-208ENST00000490447 THPOP40225 353 aa20.55■□□□□ 0.88
YIPF3-208ENST00000490447 SP2Q02086 613 aa20.55■□□□□ 0.88
YIPF3-208ENST00000490447 TROAPQ12815 778 aa20.55■□□□□ 0.88
YIPF3-208ENST00000490447 GRB10Q13322 594 aa20.55■□□□□ 0.88
YIPF3-208ENST00000490447 KRT40Q6A162 431 aa20.55■□□□□ 0.88
YIPF3-208ENST00000490447 PIBF1Q8WXW3 757 aa20.55■□□□□ 0.88
YIPF3-208ENST00000490447 SENP2Q9HC62 589 aa20.55■□□□□ 0.88
YIPF3-208ENST00000490447 H3BRB1 525 aa20.54■□□□□ 0.88
YIPF3-208ENST00000490447 LGR5O75473 907 aa20.54■□□□□ 0.88
YIPF3-208ENST00000490447 SLC35G1Q2M3R5 365 aa20.54■□□□□ 0.88
YIPF3-208ENST00000490447 TRIM71Q2Q1W2 868 aaKnown RBP20.54■□□□□ 0.88
YIPF3-208ENST00000490447 CTCFLQ8NI51 663 aaPredicted RBP20.54■□□□□ 0.88
YIPF3-208ENST00000490447 GPKOWQ92917 476 aaPredicted RBP eCLIP20.54■□□□□ 0.88
YIPF3-208ENST00000490447 ATP6V0A1Q93050 837 aa20.54■□□□□ 0.88
YIPF3-208ENST00000490447 WNT8BQ93098 351 aa20.54■□□□□ 0.88
YIPF3-208ENST00000490447 C16orf70Q9BSU1 422 aa20.54■□□□□ 0.88
YIPF3-208ENST00000490447 TUT1Q9H6E5 874 aaKnown RBP20.54■□□□□ 0.88
YIPF3-208ENST00000490447 TRIP12Q14669 1992 aaPredicted RBP20.54■□□□□ 0.88
YIPF3-208ENST00000490447 TET1Q8NFU7 2136 aa20.54■□□□□ 0.88
YIPF3-208ENST00000490447 RSPH10B2B2RC85 870 aa20.53■□□□□ 0.88
YIPF3-208ENST00000490447 SGSM2O43147 1006 aa20.53■□□□□ 0.88
YIPF3-208ENST00000490447 LGALS2P05162 132 aa20.53■□□□□ 0.88
YIPF3-208ENST00000490447 RSPH10BP0C881 870 aa20.53■□□□□ 0.88
YIPF3-208ENST00000490447 KCNQ1P51787 676 aa20.53■□□□□ 0.88
YIPF3-208ENST00000490447 NEDD9Q14511 834 aa20.53■□□□□ 0.88
YIPF3-208ENST00000490447 FAM117BQ6P1L5 589 aa20.53■□□□□ 0.88
YIPF3-208ENST00000490447 SERINC5Q86VE9 423 aa20.53■□□□□ 0.88
YIPF3-208ENST00000490447 SMARCC2Q8TAQ2 1214 aa20.53■□□□□ 0.88
YIPF3-208ENST00000490447 CUL5Q93034 780 aa20.53■□□□□ 0.88
YIPF3-208ENST00000490447 HLA-CQ95604 372 aa20.53■□□□□ 0.88
YIPF3-208ENST00000490447 USP26Q9BXU7 913 aa20.53■□□□□ 0.88
YIPF3-208ENST00000490447 SEC63Q9UGP8 760 aaKnown RBP20.53■□□□□ 0.88
YIPF3-208ENST00000490447 MTUS1Q9ULD2 1270 aa20.53■□□□□ 0.88
YIPF3-208ENST00000490447 SUPT16HQ9Y5B9 1047 aaKnown RBP20.53■□□□□ 0.88
YIPF3-208ENST00000490447 BMP1P13497 986 aa20.53■□□□□ 0.88
YIPF3-208ENST00000490447 KIF5BP33176 963 aa20.53■□□□□ 0.88
YIPF3-208ENST00000490447 TRAF7Q6Q0C0 670 aa20.53■□□□□ 0.88
YIPF3-208ENST00000490447 CASC1Q6TDU7 716 aa20.53■□□□□ 0.88
YIPF3-208ENST00000490447 SPRED2Q7Z698 418 aa20.53■□□□□ 0.88
YIPF3-208ENST00000490447 GDPD5Q8WTR4 605 aa20.53■□□□□ 0.88
YIPF3-208ENST00000490447 RRP36Q96EU6 259 aaKnown RBP20.53■□□□□ 0.88
YIPF3-208ENST00000490447 TGS1Q96RS0 853 aaKnown RBP20.53■□□□□ 0.88
YIPF3-208ENST00000490447 FIBPO43427 364 aa20.52■□□□□ 0.87
YIPF3-208ENST00000490447 AMHP03971 560 aa20.52■□□□□ 0.87
YIPF3-208ENST00000490447 SMIM10L2AP0DMW4 78 aa20.52■□□□□ 0.87
YIPF3-208ENST00000490447 SMIM10L2BP0DMW5 78 aa20.52■□□□□ 0.87
YIPF3-208ENST00000490447 HIC1Q14526 733 aa20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms