RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 HSCBQ8IWL3 235 aa16.43■□□□□ 0.22
HLA-F-229ENST00000489502 ARRDC4Q8NCT1 418 aa16.43■□□□□ 0.22
HLA-F-229ENST00000489502 KLHDC9Q8NEP7 349 aa16.43■□□□□ 0.22
HLA-F-229ENST00000489502 TBCKQ8TEA7 893 aa16.43■□□□□ 0.22
HLA-F-229ENST00000489502 SNX21Q969T3 373 aa16.43■□□□□ 0.22
HLA-F-229ENST00000489502 SPC25Q9HBM1 224 aa16.43■□□□□ 0.22
HLA-F-229ENST00000489502 BRMS1Q9HCU9 246 aa16.43■□□□□ 0.22
HLA-F-229ENST00000489502 FOXD4L1Q9NU39 408 aa16.43■□□□□ 0.22
HLA-F-229ENST00000489502 SMC3Q9UQE7 1217 aa16.43■□□□□ 0.22
HLA-F-229ENST00000489502 CCDC194A0A1B0GVG4 234 aa16.42■□□□□ 0.22
HLA-F-229ENST00000489502 SPATA31C2B4DYI2 1134 aa16.42■□□□□ 0.22
HLA-F-229ENST00000489502 FAM86B1E9PN63 330 aa16.42■□□□□ 0.22
HLA-F-229ENST00000489502 NKRFO15226 690 aaKnown RBP eCLIP16.42■□□□□ 0.22
HLA-F-229ENST00000489502 GGPS1O95749 300 aa16.42■□□□□ 0.22
HLA-F-229ENST00000489502 GH1P01241 217 aa16.42■□□□□ 0.22
HLA-F-229ENST00000489502 FAM86B2P0C5J1 330 aa16.42■□□□□ 0.22
HLA-F-229ENST00000489502 CST5P28325 142 aaPredicted RBP16.42■□□□□ 0.22
HLA-F-229ENST00000489502 ICAM3P32942 547 aa16.42■□□□□ 0.22
HLA-F-229ENST00000489502 ZNF76P36508 570 aa16.42■□□□□ 0.22
HLA-F-229ENST00000489502 MTMR1Q13613 665 aa16.42■□□□□ 0.22
HLA-F-229ENST00000489502 NONOQ15233 471 aaKnown RBP eCLIP16.42■□□□□ 0.22
HLA-F-229ENST00000489502 INF2Q27J81 1249 aa16.42■□□□□ 0.22
HLA-F-229ENST00000489502 CEP55Q53EZ4 464 aa16.42■□□□□ 0.22
HLA-F-229ENST00000489502 PIK3AP1Q6ZUJ8 805 aa16.42■□□□□ 0.22
HLA-F-229ENST00000489502 NLRX1Q86UT6 975 aa16.42■□□□□ 0.22
HLA-F-229ENST00000489502 TNFRSF25Q93038 417 aa16.42■□□□□ 0.22
HLA-F-229ENST00000489502 FERMT2Q96AC1 680 aa16.42■□□□□ 0.22
HLA-F-229ENST00000489502 GPRASP2Q96D09 838 aa16.42■□□□□ 0.22
HLA-F-229ENST00000489502 UIMC1Q96RL1 719 aa16.42■□□□□ 0.22
HLA-F-229ENST00000489502 MXRA8Q9BRK3 442 aa16.42■□□□□ 0.22
HLA-F-229ENST00000489502 C11orf49Q9H6J7 331 aa16.42■□□□□ 0.22
HLA-F-229ENST00000489502 BCAS3Q9H6U6 928 aa16.42■□□□□ 0.22
HLA-F-229ENST00000489502 JADE2Q9NQC1 790 aa16.42■□□□□ 0.22
HLA-F-229ENST00000489502 DNAH12Q6ZR08 3092 aa16.42■□□□□ 0.22
HLA-F-229ENST00000489502 BTBD18B2RXH4 712 aa16.41■□□□□ 0.22
HLA-F-229ENST00000489502 EDIL3O43854 480 aa16.41■□□□□ 0.22
HLA-F-229ENST00000489502 TDP2O95551 362 aa16.41■□□□□ 0.22
HLA-F-229ENST00000489502 COL6A1P12109 1028 aa16.41■□□□□ 0.22
HLA-F-229ENST00000489502 SP4Q02446 784 aa16.41■□□□□ 0.22
HLA-F-229ENST00000489502 KCNA10Q16322 511 aa16.41■□□□□ 0.22
HLA-F-229ENST00000489502 GNASQ5JWF2 1037 aa16.41■□□□□ 0.22
HLA-F-229ENST00000489502 IFFO2Q5TF58 517 aa16.41■□□□□ 0.22
HLA-F-229ENST00000489502 CCSAPQ6IQ19 270 aaPredicted RBP16.41■□□□□ 0.22
HLA-F-229ENST00000489502 NECAB2Q7Z6G3 386 aa16.41■□□□□ 0.22
HLA-F-229ENST00000489502 AFG1LQ8WV93 481 aa16.41■□□□□ 0.22
HLA-F-229ENST00000489502 PHF24Q9UPV7 400 aa16.41■□□□□ 0.22
HLA-F-229ENST00000489502 Q9Y3F1 56 aa16.41■□□□□ 0.22
HLA-F-229ENST00000489502 KIF3AQ9Y496 699 aa16.41■□□□□ 0.22
HLA-F-229ENST00000489502 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.41■□□□□ 0.22
HLA-F-229ENST00000489502 IGLV3-22A0A075B6J6 115 aa16.4■□□□□ 0.22
HLA-F-229ENST00000489502 A0A1W2PQ45 241 aaPredicted RBP16.4■□□□□ 0.22
HLA-F-229ENST00000489502 A0A1W2PQY0 241 aa16.4■□□□□ 0.22
HLA-F-229ENST00000489502 ATP9AO75110 1047 aa16.4■□□□□ 0.22
HLA-F-229ENST00000489502 CYP3A4P08684 503 aa16.4■□□□□ 0.22
HLA-F-229ENST00000489502 ARP10275 920 aa16.4■□□□□ 0.22
HLA-F-229ENST00000489502 KCNA2P16389 499 aa16.4■□□□□ 0.22
HLA-F-229ENST00000489502 ACLYP53396 1101 aa16.4■□□□□ 0.22
HLA-F-229ENST00000489502 CELF3Q5SZQ8 465 aaKnown RBP16.4■□□□□ 0.22
HLA-F-229ENST00000489502 KCNV1Q6PIU1 500 aa16.4■□□□□ 0.22
HLA-F-229ENST00000489502 PLA2G4DQ86XP0 818 aa16.4■□□□□ 0.22
HLA-F-229ENST00000489502 DHX37Q8IY37 1157 aaKnown RBP16.4■□□□□ 0.22
HLA-F-229ENST00000489502 FBXO18Q8NFZ0 1043 aa16.4■□□□□ 0.22
HLA-F-229ENST00000489502 SENP6Q9GZR1 1112 aaPredicted RBP16.4■□□□□ 0.22
HLA-F-229ENST00000489502 KCNH7Q9NS40 1196 aa16.4■□□□□ 0.22
HLA-F-229ENST00000489502 TELO2Q9Y4R8 837 aa16.4■□□□□ 0.22
HLA-F-229ENST00000489502 TNRC18O15417 2968 aaPredicted RBP16.4■□□□□ 0.22
HLA-F-229ENST00000489502 PDE4DIPQ5VU43 2346 aa16.4■□□□□ 0.22
HLA-F-229ENST00000489502 KIF28PB7ZC32 967 aa16.39■□□□□ 0.21
HLA-F-229ENST00000489502 MEIS1O00470 390 aa16.39■□□□□ 0.21
HLA-F-229ENST00000489502 ASGR1P07306 291 aa16.39■□□□□ 0.21
HLA-F-229ENST00000489502 MMP3P08254 477 aa16.39■□□□□ 0.21
HLA-F-229ENST00000489502 MYL3P08590 195 aa16.39■□□□□ 0.21
HLA-F-229ENST00000489502 CAPN2P17655 700 aa16.39■□□□□ 0.21
HLA-F-229ENST00000489502 CPT1AP50416 773 aa16.39■□□□□ 0.21
HLA-F-229ENST00000489502 ATN1P54259 1190 aaPredicted RBP16.39■□□□□ 0.21
HLA-F-229ENST00000489502 NKX3-2P78367 333 aa16.39■□□□□ 0.21
HLA-F-229ENST00000489502 SAFBQ15424 915 aaKnown RBP eCLIP16.39■□□□□ 0.21
HLA-F-229ENST00000489502 PRR16Q569H4 304 aa16.39■□□□□ 0.21
HLA-F-229ENST00000489502 MYSM1Q5VVJ2 828 aa16.39■□□□□ 0.21
HLA-F-229ENST00000489502 CXCL17Q6UXB2 119 aa16.39■□□□□ 0.21
HLA-F-229ENST00000489502 CYFIP1Q7L576 1253 aa16.39■□□□□ 0.21
HLA-F-229ENST00000489502 PCSK9Q8NBP7 692 aaKnown RBP16.39■□□□□ 0.21
HLA-F-229ENST00000489502 LENG9Q96B70 501 aa16.39■□□□□ 0.21
HLA-F-229ENST00000489502 CDHR1Q96JP9 859 aa16.39■□□□□ 0.21
HLA-F-229ENST00000489502 SPATA33Q96N06 139 aa16.39■□□□□ 0.21
HLA-F-229ENST00000489502 TGFB3P10600 412 aa16.38■□□□□ 0.21
HLA-F-229ENST00000489502 CIITAP33076 1130 aa16.38■□□□□ 0.21
HLA-F-229ENST00000489502 RGS19P49795 217 aa16.38■□□□□ 0.21
HLA-F-229ENST00000489502 SETQ01105 290 aaPredicted RBP16.38■□□□□ 0.21
HLA-F-229ENST00000489502 ITGB3BPQ13352 177 aaPredicted RBP16.38■□□□□ 0.21
HLA-F-229ENST00000489502 LETM2Q2VYF4 491 aa16.38■□□□□ 0.21
HLA-F-229ENST00000489502 HSDL1Q3SXM5 330 aa16.38■□□□□ 0.21
HLA-F-229ENST00000489502 NIPA1Q7RTP0 329 aa16.38■□□□□ 0.21
HLA-F-229ENST00000489502 NEK8Q86SG6 692 aa16.38■□□□□ 0.21
HLA-F-229ENST00000489502 EMID1Q96A84 441 aaPredicted RBP16.38■□□□□ 0.21
HLA-F-229ENST00000489502 TSEN34Q9BSV6 310 aaKnown RBP16.38■□□□□ 0.21
HLA-F-229ENST00000489502 MLXIPQ9HAP2 919 aa16.38■□□□□ 0.21
HLA-F-229ENST00000489502 AGO4Q9HCK5 861 aaKnown RBP16.38■□□□□ 0.21
HLA-F-229ENST00000489502 SCN10AQ9Y5Y9 1956 aa16.38■□□□□ 0.21
HLA-F-229ENST00000489502 MOXD2PA6NHM9 499 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms