RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 PCDH10Q9P2E7 1040 aa21.83■■□□□ 1.09
MRPL55-230ENST00000489430 CYP46A1Q9Y6A2 500 aa21.83■■□□□ 1.09
MRPL55-230ENST00000489430 hCG_1642624A0A1W2PR95 340 aa21.82■■□□□ 1.08
MRPL55-230ENST00000489430 GGPS1O95749 300 aa21.82■■□□□ 1.08
MRPL55-230ENST00000489430 F2P00734 622 aa21.82■■□□□ 1.08
MRPL55-230ENST00000489430 FOSP01100 380 aaPredicted RBP21.82■■□□□ 1.08
MRPL55-230ENST00000489430 WWC2Q6AWC2 1192 aa21.82■■□□□ 1.08
MRPL55-230ENST00000489430 NLRX1Q86UT6 975 aa21.82■■□□□ 1.08
MRPL55-230ENST00000489430 GIMAP8Q8ND71 665 aaPredicted RBP21.82■■□□□ 1.08
MRPL55-230ENST00000489430 LRCH3Q96II8 777 aa21.82■■□□□ 1.08
MRPL55-230ENST00000489430 SPATA33Q96N06 139 aa21.82■■□□□ 1.08
MRPL55-230ENST00000489430 NOC4LQ9BVI4 516 aaKnown RBP21.82■■□□□ 1.08
MRPL55-230ENST00000489430 RIC8AQ9NPQ8 531 aa21.82■■□□□ 1.08
MRPL55-230ENST00000489430 MAFGO15525 162 aa21.81■■□□□ 1.08
MRPL55-230ENST00000489430 ADD1P35611 737 aaKnown RBP21.81■■□□□ 1.08
MRPL55-230ENST00000489430 NAPAP54920 295 aa21.81■■□□□ 1.08
MRPL55-230ENST00000489430 SP2Q02086 613 aa21.81■■□□□ 1.08
MRPL55-230ENST00000489430 C9orf50Q5SZB4 431 aa21.81■■□□□ 1.08
MRPL55-230ENST00000489430 METTL7BQ6UX53 244 aa21.81■■□□□ 1.08
MRPL55-230ENST00000489430 KAT2BQ92831 832 aa21.81■■□□□ 1.08
MRPL55-230ENST00000489430 GPKOWQ92917 476 aaPredicted RBP eCLIP21.81■■□□□ 1.08
MRPL55-230ENST00000489430 GPRASP2Q96D09 838 aa21.81■■□□□ 1.08
MRPL55-230ENST00000489430 MLXIPQ9HAP2 919 aa21.81■■□□□ 1.08
MRPL55-230ENST00000489430 NAP1L2Q9ULW6 460 aaPredicted RBP21.81■■□□□ 1.08
MRPL55-230ENST00000489430 SCN10AQ9Y5Y9 1956 aa21.8■■□□□ 1.08
MRPL55-230ENST00000489430 EPHB4P54760 987 aa21.8■■□□□ 1.08
MRPL55-230ENST00000489430 PFKFB3Q16875 520 aaPredicted RBP21.8■■□□□ 1.08
MRPL55-230ENST00000489430 HSDL1Q3SXM5 330 aa21.8■■□□□ 1.08
MRPL55-230ENST00000489430 FAM47CQ5HY64 1035 aa21.8■■□□□ 1.08
MRPL55-230ENST00000489430 FAM109BQ6ICB4 259 aaPredicted RBP21.8■■□□□ 1.08
MRPL55-230ENST00000489430 PSRC1Q6PGN9 363 aaPredicted RBP21.8■■□□□ 1.08
MRPL55-230ENST00000489430 PPP1R12CQ9BZL4 782 aa21.8■■□□□ 1.08
MRPL55-230ENST00000489430 TRMT13Q9NUP7 481 aaKnown RBP21.8■■□□□ 1.08
MRPL55-230ENST00000489430 KIAA1217Q5T5P2 1943 aa21.8■■□□□ 1.08
MRPL55-230ENST00000489430 STXBP3O00186 592 aa21.79■■□□□ 1.08
MRPL55-230ENST00000489430 HAS3O00219 553 aa21.79■■□□□ 1.08
MRPL55-230ENST00000489430 PITPNM1O00562 1244 aa21.79■■□□□ 1.08
MRPL55-230ENST00000489430 PRPF3O43395 683 aaKnown RBP21.79■■□□□ 1.08
MRPL55-230ENST00000489430 CSF2RAP15509 400 aa21.79■■□□□ 1.08
MRPL55-230ENST00000489430 ANAPC15P60006 121 aa21.79■■□□□ 1.08
MRPL55-230ENST00000489430 SMAD3P84022 425 aaKnown RBP21.79■■□□□ 1.08
MRPL55-230ENST00000489430 MCTP2Q6DN12 878 aa21.79■■□□□ 1.08
MRPL55-230ENST00000489430 CCDC12Q8WUD4 166 aaPredicted RBP21.79■■□□□ 1.08
MRPL55-230ENST00000489430 RNPC3Q96LT9 517 aaKnown RBP21.79■■□□□ 1.08
MRPL55-230ENST00000489430 PCDHA6Q9UN73 950 aa21.79■■□□□ 1.08
MRPL55-230ENST00000489430 PCDHA8Q9Y5H6 950 aa21.79■■□□□ 1.08
MRPL55-230ENST00000489430 ESYT2A0FGR8 921 aa21.78■■□□□ 1.08
MRPL55-230ENST00000489430 SCG2P13521 617 aa21.78■■□□□ 1.08
MRPL55-230ENST00000489430 PDIA3P30101 505 aaKnown RBP21.78■■□□□ 1.08
MRPL55-230ENST00000489430 CYP2C18P33260 490 aa21.78■■□□□ 1.08
MRPL55-230ENST00000489430 ADCY7P51828 1080 aa21.78■■□□□ 1.08
MRPL55-230ENST00000489430 AP3B2Q13367 1082 aa21.78■■□□□ 1.08
MRPL55-230ENST00000489430 UBE2SQ16763 222 aa21.78■■□□□ 1.08
MRPL55-230ENST00000489430 TYW1BQ6NUM6 668 aa21.78■■□□□ 1.08
MRPL55-230ENST00000489430 RPUSD2Q8IZ73 545 aaKnown RBP21.78■■□□□ 1.08
MRPL55-230ENST00000489430 ZNF274Q96GC6 653 aaPredicted RBP21.78■■□□□ 1.08
MRPL55-230ENST00000489430 RNF26Q9BY78 433 aaPredicted RBP21.78■■□□□ 1.08
MRPL55-230ENST00000489430 IL23AQ9NPF7 189 aa21.78■■□□□ 1.08
MRPL55-230ENST00000489430 RTEL1Q9NZ71 1219 aa21.78■■□□□ 1.08
MRPL55-230ENST00000489430 SMCO2A6NFE2 343 aa21.77■■□□□ 1.08
MRPL55-230ENST00000489430 NOP56O00567 594 aaKnown RBP21.77■■□□□ 1.08
MRPL55-230ENST00000489430 PFKMP08237 780 aa21.77■■□□□ 1.08
MRPL55-230ENST00000489430 IFNAR1P17181 557 aa21.77■■□□□ 1.08
MRPL55-230ENST00000489430 PSEN2P49810 448 aa21.77■■□□□ 1.08
MRPL55-230ENST00000489430 AKAP17AQ02040 695 aaKnown RBP21.77■■□□□ 1.08
MRPL55-230ENST00000489430 SEMA3FQ13275 785 aa21.77■■□□□ 1.08
MRPL55-230ENST00000489430 BFSP2Q13515 415 aa21.77■■□□□ 1.08
MRPL55-230ENST00000489430 C7orf31Q8N865 590 aa21.77■■□□□ 1.08
MRPL55-230ENST00000489430 GTF2IRD1Q9UHL9 959 aa21.77■■□□□ 1.08
MRPL55-230ENST00000489430 NOD1Q9Y239 953 aa21.77■■□□□ 1.08
MRPL55-230ENST00000489430 UBIAD1Q9Y5Z9 338 aa21.77■■□□□ 1.08
MRPL55-230ENST00000489430 ITGB5P18084 799 aa21.76■■□□□ 1.07
MRPL55-230ENST00000489430 RFC2P35250 354 aa21.76■■□□□ 1.07
MRPL55-230ENST00000489430 CLK2P49760 499 aaKnown RBP21.76■■□□□ 1.07
MRPL55-230ENST00000489430 TOB2Q14106 344 aaPredicted RBP21.76■■□□□ 1.07
MRPL55-230ENST00000489430 MFSD10Q14728 455 aa21.76■■□□□ 1.07
MRPL55-230ENST00000489430 NTRK3Q16288 839 aa21.76■■□□□ 1.07
MRPL55-230ENST00000489430 KIAA0753Q2KHM9 967 aa21.76■■□□□ 1.07
MRPL55-230ENST00000489430 TMEM240Q5SV17 173 aa21.76■■□□□ 1.07
MRPL55-230ENST00000489430 RASIP1Q5U651 963 aa21.76■■□□□ 1.07
MRPL55-230ENST00000489430 C16orf59Q7L2K0 433 aa21.76■■□□□ 1.07
MRPL55-230ENST00000489430 CCDC155Q8N6L0 562 aa21.76■■□□□ 1.07
MRPL55-230ENST00000489430 CAGE1Q8TC20 777 aa21.76■■□□□ 1.07
MRPL55-230ENST00000489430 IL17RAQ96F46 866 aa21.76■■□□□ 1.07
MRPL55-230ENST00000489430 ZFP91Q96JP5 570 aaPredicted RBP21.76■■□□□ 1.07
MRPL55-230ENST00000489430 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.76■■□□□ 1.072e-7■■■□□ 15.4
MRPL55-230ENST00000489430 ZMYND12Q9H0C1 365 aa21.76■■□□□ 1.07
MRPL55-230ENST00000489430 MTIF3Q9H2K0 278 aaKnown RBP21.76■■□□□ 1.07
MRPL55-230ENST00000489430 CYP2C9P11712 490 aa21.75■■□□□ 1.07
MRPL55-230ENST00000489430 GNA11P29992 359 aa21.75■■□□□ 1.07
MRPL55-230ENST00000489430 MTMR1Q13613 665 aa21.75■■□□□ 1.07
MRPL55-230ENST00000489430 PTGISQ16647 500 aa21.75■■□□□ 1.07
MRPL55-230ENST00000489430 CYFIP1Q7L576 1253 aa21.75■■□□□ 1.07
MRPL55-230ENST00000489430 C16orf70Q9BSU1 422 aa21.75■■□□□ 1.07
MRPL55-230ENST00000489430 WNT8AQ9H1J5 351 aa21.75■■□□□ 1.07
MRPL55-230ENST00000489430 JADE2Q9NQC1 790 aa21.75■■□□□ 1.07
MRPL55-230ENST00000489430 PARNO95453 639 aaKnown RBP21.74■■□□□ 1.07
MRPL55-230ENST00000489430 ZNF286BP0CG31 522 aa21.74■■□□□ 1.07
MRPL55-230ENST00000489430 RBL2Q08999 1139 aa21.74■■□□□ 1.07
MRPL55-230ENST00000489430 PKN1Q16512 942 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms