RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 TYW1BQ6NUM6 668 aa28.75■■■□□ 2.19
HMGN1-217ENST00000489072 RTEL1Q9NZ71 1219 aa28.75■■■□□ 2.19
HMGN1-217ENST00000489072 NAP1L2Q9ULW6 460 aaPredicted RBP28.75■■■□□ 2.19
HMGN1-217ENST00000489072 EPB41L2O43491 1005 aaKnown RBP28.74■■■□□ 2.19
HMGN1-217ENST00000489072 STAM2O75886 525 aa28.74■■■□□ 2.19
HMGN1-217ENST00000489072 SUPT20HL2P0C7V6 817 aa28.74■■■□□ 2.19
HMGN1-217ENST00000489072 ACRP10323 421 aa28.74■■■□□ 2.19
HMGN1-217ENST00000489072 HOXD8P13378 290 aaPredicted RBP28.74■■■□□ 2.19
HMGN1-217ENST00000489072 ICAM3P32942 547 aa28.74■■■□□ 2.19
HMGN1-217ENST00000489072 PTPN11Q06124 597 aaPredicted RBP28.74■■■□□ 2.19
HMGN1-217ENST00000489072 HSDL1Q3SXM5 330 aa28.74■■■□□ 2.19
HMGN1-217ENST00000489072 SPATA33Q96N06 139 aa28.74■■■□□ 2.19
HMGN1-217ENST00000489072 USP26Q9BXU7 913 aa28.74■■■□□ 2.19
HMGN1-217ENST00000489072 V9GY48 417 aaPredicted RBP28.74■■■□□ 2.19
HMGN1-217ENST00000489072 SPATA31C2B4DYI2 1134 aa28.73■■■□□ 2.19
HMGN1-217ENST00000489072 CENPBP07199 599 aaPredicted RBP28.73■■■□□ 2.19
HMGN1-217ENST00000489072 ZNF286BP0CG31 522 aa28.73■■■□□ 2.19
HMGN1-217ENST00000489072 ADD1P35611 737 aaKnown RBP28.73■■■□□ 2.19
HMGN1-217ENST00000489072 GNPTABQ3T906 1256 aa28.73■■■□□ 2.19
HMGN1-217ENST00000489072 FBXL16Q8N461 479 aa28.73■■■□□ 2.19
HMGN1-217ENST00000489072 AGXT2Q9BYV1 514 aa28.73■■■□□ 2.19
HMGN1-217ENST00000489072 IL23AQ9NPF7 189 aa28.73■■■□□ 2.19
HMGN1-217ENST00000489072 SCN5AQ14524 2016 aa28.72■■■□□ 2.19
HMGN1-217ENST00000489072 TRIP12Q14669 1992 aaPredicted RBP28.72■■■□□ 2.19
HMGN1-217ENST00000489072 PSMA5P28066 241 aa28.72■■■□□ 2.19
HMGN1-217ENST00000489072 METAP2P50579 478 aaKnown RBP eCLIP28.72■■■□□ 2.19
HMGN1-217ENST00000489072 XRRA1Q6P2D8 792 aa28.72■■■□□ 2.19
HMGN1-217ENST00000489072 COL6A3P12111 3177 aa28.71■■■□□ 2.19
HMGN1-217ENST00000489072 F2P00734 622 aa28.71■■■□□ 2.19
HMGN1-217ENST00000489072 PSEN2P49810 448 aa28.71■■■□□ 2.19
HMGN1-217ENST00000489072 ZNF365Q70YC5 407 aa28.71■■■□□ 2.19
HMGN1-217ENST00000489072 SESTD1Q86VW0 696 aa28.71■■■□□ 2.19
HMGN1-217ENST00000489072 SCLYQ96I15 445 aa28.71■■■□□ 2.19
HMGN1-217ENST00000489072 CTAGE1Q96RT6 745 aa28.71■■■□□ 2.19
HMGN1-217ENST00000489072 MLXIPQ9HAP2 919 aa28.71■■■□□ 2.19
HMGN1-217ENST00000489072 NID2Q14112 1375 aa28.71■■■□□ 2.19
HMGN1-217ENST00000489072 STXBP3O00186 592 aa28.7■■■□□ 2.18
HMGN1-217ENST00000489072 HAS3O00219 553 aa28.7■■■□□ 2.18
HMGN1-217ENST00000489072 FIBPO43427 364 aa28.7■■■□□ 2.18
HMGN1-217ENST00000489072 PPFIA4O75335 1185 aa28.7■■■□□ 2.18
HMGN1-217ENST00000489072 NAPAP54920 295 aa28.7■■■□□ 2.18
HMGN1-217ENST00000489072 SMAD3P84022 425 aaKnown RBP28.7■■■□□ 2.18
HMGN1-217ENST00000489072 GDF6Q6KF10 455 aaPredicted RBP28.7■■■□□ 2.18
HMGN1-217ENST00000489072 VWCEQ96DN2 955 aa28.7■■■□□ 2.18
HMGN1-217ENST00000489072 ALG1Q9BT22 464 aa28.7■■■□□ 2.18
HMGN1-217ENST00000489072 MTMR10Q9NXD2 777 aa28.7■■■□□ 2.18
HMGN1-217ENST00000489072 MFSD10Q14728 455 aa28.69■■■□□ 2.18
HMGN1-217ENST00000489072 RASIP1Q5U651 963 aa28.69■■■□□ 2.18
HMGN1-217ENST00000489072 FAM109BQ6ICB4 259 aaPredicted RBP28.69■■■□□ 2.18
HMGN1-217ENST00000489072 PPP1R18Q6NYC8 613 aa28.69■■■□□ 2.18
HMGN1-217ENST00000489072 PSRC1Q6PGN9 363 aaPredicted RBP28.69■■■□□ 2.18
HMGN1-217ENST00000489072 PCDHA6Q9UN73 950 aa28.69■■■□□ 2.18
HMGN1-217ENST00000489072 PCDHA8Q9Y5H6 950 aa28.69■■■□□ 2.18
HMGN1-217ENST00000489072 TANC1Q9C0D5 1861 aa28.69■■■□□ 2.18
HMGN1-217ENST00000489072 PTGISQ16647 500 aa28.68■■■□□ 2.18
HMGN1-217ENST00000489072 KIAA0753Q2KHM9 967 aa28.68■■■□□ 2.18
HMGN1-217ENST00000489072 CYFIP1Q7L576 1253 aa28.68■■■□□ 2.18
HMGN1-217ENST00000489072 C16orf70Q9BSU1 422 aa28.68■■■□□ 2.18
HMGN1-217ENST00000489072 KATNAL1Q9BW62 490 aa28.68■■■□□ 2.18
HMGN1-217ENST00000489072 ZSWIM6Q9HCJ5 1215 aa28.68■■■□□ 2.18
HMGN1-217ENST00000489072 RIC8AQ9NPQ8 531 aa28.68■■■□□ 2.18
HMGN1-217ENST00000489072 BARHL2Q9NY43 387 aa28.68■■■□□ 2.18
HMGN1-217ENST00000489072 HDAC6Q9UBN7 1215 aa28.68■■■□□ 2.18
HMGN1-217ENST00000489072 TELO2Q9Y4R8 837 aa28.68■■■□□ 2.18
HMGN1-217ENST00000489072 CCDC196A0A1B0GTZ2 297 aa28.67■■■□□ 2.18
HMGN1-217ENST00000489072 SPDYE3A6NKU9 549 aa28.67■■■□□ 2.18
HMGN1-217ENST00000489072 NEDD9Q14511 834 aa28.67■■■□□ 2.18
HMGN1-217ENST00000489072 METTL7BQ6UX53 244 aa28.67■■■□□ 2.18
HMGN1-217ENST00000489072 RUFY3Q7L099 469 aa28.67■■■□□ 2.18
HMGN1-217ENST00000489072 GTF2IRD1Q9UHL9 959 aa28.67■■■□□ 2.18
HMGN1-217ENST00000489072 NOD1Q9Y239 953 aa28.67■■■□□ 2.18
HMGN1-217ENST00000489072 hCG_1984214I3L0E3 225 aa28.66■■■□□ 2.18
HMGN1-217ENST00000489072 ITGB5P18084 799 aa28.66■■■□□ 2.18
HMGN1-217ENST00000489072 NLRX1Q86UT6 975 aa28.66■■■□□ 2.18
HMGN1-217ENST00000489072 ZNF713Q8N859 430 aaPredicted RBP28.66■■■□□ 2.18
HMGN1-217ENST00000489072 C7orf31Q8N865 590 aa28.66■■■□□ 2.18
HMGN1-217ENST00000489072 UBIAD1Q9Y5Z9 338 aa28.66■■■□□ 2.18
HMGN1-217ENST00000489072 FGBP02675 491 aa28.65■■■□□ 2.18
HMGN1-217ENST00000489072 ADCY7P51828 1080 aa28.65■■■□□ 2.18
HMGN1-217ENST00000489072 EVCP57679 992 aa28.65■■■□□ 2.18
HMGN1-217ENST00000489072 TOB2Q14106 344 aaPredicted RBP28.65■■■□□ 2.18
HMGN1-217ENST00000489072 PFKFB3Q16875 520 aaPredicted RBP28.65■■■□□ 2.18
HMGN1-217ENST00000489072 TET1Q8NFU7 2136 aa28.65■■■□□ 2.18
HMGN1-217ENST00000489072 HERVK_113Q902F9 699 aa28.65■■■□□ 2.18
HMGN1-217ENST00000489072 GPRASP2Q96D09 838 aa28.65■■■□□ 2.18
HMGN1-217ENST00000489072 PGBD1Q96JS3 809 aa28.65■■■□□ 2.18
HMGN1-217ENST00000489072 FAM161BQ96MY7 647 aa28.65■■■□□ 2.18
HMGN1-217ENST00000489072 SENP7Q9BQF6 1050 aa28.65■■■□□ 2.18
HMGN1-217ENST00000489072 CXXC1Q9P0U4 656 aaPredicted RBP28.65■■■□□ 2.18
HMGN1-217ENST00000489072 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.64■■■□□ 2.18
HMGN1-217ENST00000489072 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.64■■■□□ 2.18
HMGN1-217ENST00000489072 SMCO2A6NFE2 343 aa28.64■■■□□ 2.18
HMGN1-217ENST00000489072 PITPNM1O00562 1244 aa28.64■■■□□ 2.18
HMGN1-217ENST00000489072 ATP9AO75110 1047 aa28.64■■■□□ 2.18
HMGN1-217ENST00000489072 LGALS2P05162 132 aa28.64■■■□□ 2.18
HMGN1-217ENST00000489072 DHX38Q92620 1227 aaKnown RBP28.64■■■□□ 2.18
HMGN1-217ENST00000489072 GPR20Q99678 358 aa28.64■■■□□ 2.18
HMGN1-217ENST00000489072 TM6SF1Q9BZW5 370 aa28.64■■■□□ 2.18
HMGN1-217ENST00000489072 NOP56O00567 594 aaKnown RBP28.63■■■□□ 2.17
HMGN1-217ENST00000489072 SCG2P13521 617 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms