RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 C11orf21Q9P2W6 132 aa4.32□□□□□ -1.72
PRPF4-203ENST00000488937 LZTS1Q9Y250 596 aa4.32□□□□□ -1.72
PRPF4-203ENST00000488937 MRPS23Q9Y3D9 190 aaKnown RBP4.32□□□□□ -1.72
PRPF4-203ENST00000488937 KLRG2A4D1S0 409 aaPredicted RBP4.31□□□□□ -1.72
PRPF4-203ENST00000488937 MEIS3P2A8K0S8 358 aa4.31□□□□□ -1.72
PRPF4-203ENST00000488937 TLR3O15455 904 aaKnown RBP4.31□□□□□ -1.72
PRPF4-203ENST00000488937 GPR39O43194 453 aa4.31□□□□□ -1.72
PRPF4-203ENST00000488937 RAPGEF3O95398 923 aa4.31□□□□□ -1.72
PRPF4-203ENST00000488937 CPEP16870 476 aa4.31□□□□□ -1.72
PRPF4-203ENST00000488937 POU3F2P20265 443 aaPredicted RBP4.31□□□□□ -1.72
PRPF4-203ENST00000488937 KRTAP10-7P60409 375 aaPredicted RBP4.31□□□□□ -1.72
PRPF4-203ENST00000488937 PDE4BQ07343 736 aa4.31□□□□□ -1.72
PRPF4-203ENST00000488937 TMEM62Q0P6H9 643 aa4.31□□□□□ -1.72
PRPF4-203ENST00000488937 LMOD3Q0VAK6 560 aa4.31□□□□□ -1.72
PRPF4-203ENST00000488937 SMN1Q16637 294 aaKnown RBP4.31□□□□□ -1.72
PRPF4-203ENST00000488937 SLC10A6Q3KNW5 377 aa4.31□□□□□ -1.72
PRPF4-203ENST00000488937 FAM83BQ5T0W9 1011 aa4.31□□□□□ -1.72
PRPF4-203ENST00000488937 FOXB2Q5VYV0 432 aa4.31□□□□□ -1.72
PRPF4-203ENST00000488937 RNF219Q5W0B1 726 aaPredicted RBP4.31□□□□□ -1.72
PRPF4-203ENST00000488937 FBXW10Q5XX13 1052 aa4.31□□□□□ -1.72
PRPF4-203ENST00000488937 LHFPL2Q6ZUX7 228 aa4.31□□□□□ -1.72
PRPF4-203ENST00000488937 LRRTM3Q86VH5 581 aa4.31□□□□□ -1.72
PRPF4-203ENST00000488937 PASD1Q8IV76 773 aa4.31□□□□□ -1.72
PRPF4-203ENST00000488937 TAB3Q8N5C8 712 aaPredicted RBP4.31□□□□□ -1.72
PRPF4-203ENST00000488937 XAGE3Q8WTP9 111 aa4.31□□□□□ -1.72
PRPF4-203ENST00000488937 RUNDC1Q96C34 613 aa4.31□□□□□ -1.72
PRPF4-203ENST00000488937 EXOC2Q96KP1 924 aa4.31□□□□□ -1.72
PRPF4-203ENST00000488937 RHOBTB2Q9BYZ6 727 aa4.31□□□□□ -1.72
PRPF4-203ENST00000488937 INO80BQ9C086 356 aaPredicted RBP4.31□□□□□ -1.72
PRPF4-203ENST00000488937 EPN3Q9H201 632 aa4.31□□□□□ -1.72
PRPF4-203ENST00000488937 CRTAC1Q9NQ79 661 aa4.31□□□□□ -1.72
PRPF4-203ENST00000488937 OBP2AQ9NY56 170 aa4.31□□□□□ -1.72
PRPF4-203ENST00000488937 SLC5A4Q9NY91 659 aa4.31□□□□□ -1.72
PRPF4-203ENST00000488937 TJP2Q9UDY2 1190 aa4.31□□□□□ -1.72
PRPF4-203ENST00000488937 POLR3KQ9Y2Y1 108 aaPredicted RBP4.31□□□□□ -1.72
PRPF4-203ENST00000488937 SPEF1Q9Y4P9 236 aa4.31□□□□□ -1.72
PRPF4-203ENST00000488937 GABRDO14764 452 aa4.3□□□□□ -1.72
PRPF4-203ENST00000488937 NPTXRO95502 500 aa4.3□□□□□ -1.72
PRPF4-203ENST00000488937 PGRP06401 933 aa4.3□□□□□ -1.72
PRPF4-203ENST00000488937 ZNF20P17024 532 aa4.3□□□□□ -1.72
PRPF4-203ENST00000488937 PTMSP20962 102 aa4.3□□□□□ -1.72
PRPF4-203ENST00000488937 MCM4P33991 863 aa4.3□□□□□ -1.72
PRPF4-203ENST00000488937 CAP1Q01518 475 aa4.3□□□□□ -1.72
PRPF4-203ENST00000488937 DHCR24Q15392 516 aa4.3□□□□□ -1.72
PRPF4-203ENST00000488937 AXDND1Q5T1B0 1012 aaPredicted RBP4.3□□□□□ -1.72
PRPF4-203ENST00000488937 DIEXFQ68CQ4 756 aaKnown RBP4.3□□□□□ -1.72
PRPF4-203ENST00000488937 SLC6A19Q695T7 634 aa4.3□□□□□ -1.72
PRPF4-203ENST00000488937 CXorf57Q6NSI4 855 aaKnown RBP4.3□□□□□ -1.72
PRPF4-203ENST00000488937 SLC4A10Q6U841 1118 aa4.3□□□□□ -1.72
PRPF4-203ENST00000488937 RUFY4Q6ZNE9 571 aa4.3□□□□□ -1.72
PRPF4-203ENST00000488937 GK5Q6ZS86 529 aa4.3□□□□□ -1.72
PRPF4-203ENST00000488937 MCATQ8IVS2 390 aaKnown RBP4.3□□□□□ -1.72
PRPF4-203ENST00000488937 FAM9BQ8IZU0 186 aa4.3□□□□□ -1.72
PRPF4-203ENST00000488937 LRRC47Q8N1G4 583 aaKnown RBP4.3□□□□□ -1.72
PRPF4-203ENST00000488937 PPM1KQ8N3J5 372 aa4.3□□□□□ -1.72
PRPF4-203ENST00000488937 MYRIPQ8NFW9 859 aa4.3□□□□□ -1.72
PRPF4-203ENST00000488937 WDR66Q8TBY9 1149 aa4.3□□□□□ -1.72
PRPF4-203ENST00000488937 DDX1Q92499 740 aaKnown RBP4.3□□□□□ -1.72
PRPF4-203ENST00000488937 ACSF2Q96CM8 615 aaPredicted RBP4.3□□□□□ -1.72
PRPF4-203ENST00000488937 VWCEQ96DN2 955 aa4.3□□□□□ -1.72
PRPF4-203ENST00000488937 TMEM87BQ96K49 555 aa4.3□□□□□ -1.72
PRPF4-203ENST00000488937 TM9SF2Q99805 663 aa4.3□□□□□ -1.72
PRPF4-203ENST00000488937 SARGQ9BW04 601 aa4.3□□□□□ -1.72
PRPF4-203ENST00000488937 MRPL4Q9BYD3 311 aaKnown RBP4.3□□□□□ -1.72
PRPF4-203ENST00000488937 TRIM8Q9BZR9 551 aa4.3□□□□□ -1.72
PRPF4-203ENST00000488937 PCDHA11Q9Y5I1 949 aa4.3□□□□□ -1.72
PRPF4-203ENST00000488937 PPP2R3BQ9Y5P8 575 aa4.3□□□□□ -1.72
PRPF4-203ENST00000488937 CORINQ9Y5Q5 1042 aa4.3□□□□□ -1.72
PRPF4-203ENST00000488937 ZNF500O60304 480 aaPredicted RBP4.29□□□□□ -1.72
PRPF4-203ENST00000488937 SDSP20132 328 aa4.29□□□□□ -1.72
PRPF4-203ENST00000488937 GUCY2CP25092 1073 aa4.29□□□□□ -1.72
PRPF4-203ENST00000488937 CCNFP41002 786 aa4.29□□□□□ -1.72
PRPF4-203ENST00000488937 KCNC1P48547 511 aa4.29□□□□□ -1.72
PRPF4-203ENST00000488937 EPHB3P54753 998 aa4.29□□□□□ -1.72
PRPF4-203ENST00000488937 SIM2Q14190 667 aaPredicted RBP4.29□□□□□ -1.72
PRPF4-203ENST00000488937 NCAPHQ15003 741 aa4.29□□□□□ -1.72
PRPF4-203ENST00000488937 PPP2R5EQ16537 467 aa4.29□□□□□ -1.72
PRPF4-203ENST00000488937 WDR78Q5VTH9 848 aa4.29□□□□□ -1.72
PRPF4-203ENST00000488937 DDX46Q7L014 1031 aaKnown RBP4.29□□□□□ -1.72
PRPF4-203ENST00000488937 NLRX1Q86UT6 975 aa4.29□□□□□ -1.72
PRPF4-203ENST00000488937 ZBTB46Q86UZ6 589 aa4.29□□□□□ -1.72
PRPF4-203ENST00000488937 SLFN12Q8IYM2 578 aa4.29□□□□□ -1.72
PRPF4-203ENST00000488937 PJA1Q8NG27 643 aa4.29□□□□□ -1.72
PRPF4-203ENST00000488937 MZB1Q8WU39 189 aa4.29□□□□□ -1.72
PRPF4-203ENST00000488937 ATXN2LQ8WWM7 1075 aaKnown RBP4.29□□□□□ -1.72
PRPF4-203ENST00000488937 SHISA4Q96DD7 197 aa4.29□□□□□ -1.72
PRPF4-203ENST00000488937 Q96M66 194 aa4.29□□□□□ -1.72
PRPF4-203ENST00000488937 STRBPQ96SI9 672 aaKnown RBP4.29□□□□□ -1.72
PRPF4-203ENST00000488937 YIPF4Q9BSR8 244 aa4.29□□□□□ -1.72
PRPF4-203ENST00000488937 PAGR1Q9BTK6 254 aa4.29□□□□□ -1.72
PRPF4-203ENST00000488937 PUS7LQ9H0K6 701 aaKnown RBP4.29□□□□□ -1.72
PRPF4-203ENST00000488937 CCDC8Q9H0W5 538 aaPredicted RBP4.29□□□□□ -1.72
PRPF4-203ENST00000488937 CNTD2Q9H8S5 307 aa4.29□□□□□ -1.72
PRPF4-203ENST00000488937 TCF7L1Q9HCS4 588 aa4.29□□□□□ -1.72
PRPF4-203ENST00000488937 AASDHPPTQ9NRN7 309 aa4.29□□□□□ -1.72
PRPF4-203ENST00000488937 ZNF180Q9UJW8 692 aa4.29□□□□□ -1.72
PRPF4-203ENST00000488937 TNKSO95271 1327 aa4.28□□□□□ -1.72
PRPF4-203ENST00000488937 ANO9A1A5B4 782 aa4.28□□□□□ -1.72
PRPF4-203ENST00000488937 IQCA1LA6NCM1 817 aa4.28□□□□□ -1.72
PRPF4-203ENST00000488937 CCER2I3L3R5 266 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms