RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 HOOK2Q96ED9 719 aa6.25□□□□□ -1.41
SF3A3-207ENST00000488934 CDCA5Q96FF9 252 aa6.25□□□□□ -1.41
SF3A3-207ENST00000488934 MXD3Q9BW11 206 aa6.25□□□□□ -1.41
SF3A3-207ENST00000488934 BCO2Q9BYV7 579 aa6.25□□□□□ -1.41
SF3A3-207ENST00000488934 NRSN2Q9GZP1 204 aa6.25□□□□□ -1.41
SF3A3-207ENST00000488934 GBA2Q9HCG7 927 aaPredicted RBP6.25□□□□□ -1.41
SF3A3-207ENST00000488934 GPN3Q9UHW5 284 aaPredicted RBP6.25□□□□□ -1.41
SF3A3-207ENST00000488934 NOP58Q9Y2X3 529 aaKnown RBP6.25□□□□□ -1.41
SF3A3-207ENST00000488934 AK9Q5TCS8 1911 aa6.25□□□□□ -1.41
SF3A3-207ENST00000488934 WDR33Q9C0J8 1336 aaKnown RBP6.25□□□□□ -1.41
SF3A3-207ENST00000488934 UNCXA6NJT0 531 aa6.24□□□□□ -1.41
SF3A3-207ENST00000488934 CA12O43570 354 aa6.24□□□□□ -1.41
SF3A3-207ENST00000488934 CRKP46108 304 aa6.24□□□□□ -1.41
SF3A3-207ENST00000488934 HUNKP57058 714 aa6.24□□□□□ -1.41
SF3A3-207ENST00000488934 SOX4Q06945 474 aaPredicted RBP6.24□□□□□ -1.41
SF3A3-207ENST00000488934 NOGQ13253 232 aa6.24□□□□□ -1.41
SF3A3-207ENST00000488934 SUPT20HL1Q3ZLR7 823 aa6.24□□□□□ -1.41
SF3A3-207ENST00000488934 XP32Q5T750 250 aa6.24□□□□□ -1.41
SF3A3-207ENST00000488934 RGMBQ6NW40 437 aa6.24□□□□□ -1.41
SF3A3-207ENST00000488934 HHIPL2Q6UWX4 724 aa6.24□□□□□ -1.41
SF3A3-207ENST00000488934 ARMC9Q7Z3E5 817 aa6.24□□□□□ -1.41
SF3A3-207ENST00000488934 ZDHHC15Q96MV8 337 aa6.24□□□□□ -1.41
SF3A3-207ENST00000488934 NEUROD6Q96NK8 337 aa6.24□□□□□ -1.41
SF3A3-207ENST00000488934 JAG2Q9Y219 1238 aa6.24□□□□□ -1.41
SF3A3-207ENST00000488934 LAMB1P07942 1786 aa6.23□□□□□ -1.41
SF3A3-207ENST00000488934 RPAP1Q9BWH6 1393 aaPredicted RBP6.23□□□□□ -1.41
SF3A3-207ENST00000488934 HMX2A2RU54 273 aa6.23□□□□□ -1.41
SF3A3-207ENST00000488934 COBLO75128 1261 aa6.23□□□□□ -1.41
SF3A3-207ENST00000488934 RAB11FIP3O75154 756 aa6.23□□□□□ -1.41
SF3A3-207ENST00000488934 ADH5P11766 374 aa6.23□□□□□ -1.41
SF3A3-207ENST00000488934 GSTT1P30711 240 aa6.23□□□□□ -1.41
SF3A3-207ENST00000488934 PHKA1P46020 1223 aa6.23□□□□□ -1.41
SF3A3-207ENST00000488934 TIMM10P62072 90 aa6.23□□□□□ -1.41
SF3A3-207ENST00000488934 GSTO1P78417 241 aa6.23□□□□□ -1.41
SF3A3-207ENST00000488934 FMR1Q06787 632 aaKnown RBP eCLIP6.23□□□□□ -1.41
SF3A3-207ENST00000488934 RASGRF1Q13972 1273 aa6.23□□□□□ -1.41
SF3A3-207ENST00000488934 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.23□□□□□ -1.41
SF3A3-207ENST00000488934 TNNI3KQ59H18 835 aa6.23□□□□□ -1.41
SF3A3-207ENST00000488934 TTC39AQ5SRH9 613 aa6.23□□□□□ -1.41
SF3A3-207ENST00000488934 FKBP1CQ5VVH2 108 aa6.23□□□□□ -1.41
SF3A3-207ENST00000488934 TMED8Q6PL24 325 aaPredicted RBP6.23□□□□□ -1.41
SF3A3-207ENST00000488934 DZIP1Q86YF9 867 aaKnown RBP6.23□□□□□ -1.41
SF3A3-207ENST00000488934 CLASRPQ8N2M8 674 aaKnown RBP6.23□□□□□ -1.41
SF3A3-207ENST00000488934 SPATA5Q8NB90 893 aa6.23□□□□□ -1.41
SF3A3-207ENST00000488934 KIF1BPQ96EK5 621 aa6.23□□□□□ -1.41
SF3A3-207ENST00000488934 ZBED3Q96IU2 234 aaPredicted RBP6.23□□□□□ -1.41
SF3A3-207ENST00000488934 ZNF512BQ96KM6 892 aaPredicted RBP6.23□□□□□ -1.41
SF3A3-207ENST00000488934 CAPNS2Q96L46 248 aa6.23□□□□□ -1.41
SF3A3-207ENST00000488934 YTHDC1Q96MU7 727 aaKnown RBP6.23□□□□□ -1.41
SF3A3-207ENST00000488934 DEFB129Q9H1M3 183 aa6.23□□□□□ -1.41
SF3A3-207ENST00000488934 VEZTQ9HBM0 779 aa6.23□□□□□ -1.41
SF3A3-207ENST00000488934 ZBTB40Q9NUA8 1239 aa6.23□□□□□ -1.41
SF3A3-207ENST00000488934 TMEM39AQ9NV64 488 aa6.23□□□□□ -1.41
SF3A3-207ENST00000488934 PCMTD2Q9NV79 361 aa6.23□□□□□ -1.41
SF3A3-207ENST00000488934 FPGT-TNNI3KV9GXZ4 949 aa6.23□□□□□ -1.41
SF3A3-207ENST00000488934 ASTN2O75129 1339 aaPredicted RBP6.23□□□□□ -1.41
SF3A3-207ENST00000488934 SYNGAP1Q96PV0 1343 aa6.23□□□□□ -1.41
SF3A3-207ENST00000488934 DOCK2Q92608 1830 aa6.22□□□□□ -1.41
SF3A3-207ENST00000488934 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.22□□□□□ -1.41
SF3A3-207ENST00000488934 FAM95CA0A1B0GW59 222 aa6.22□□□□□ -1.41
SF3A3-207ENST00000488934 CLRN2A0PK11 232 aa6.22□□□□□ -1.41
SF3A3-207ENST00000488934 MAP4K4O95819 1239 aaPredicted RBP6.22□□□□□ -1.41
SF3A3-207ENST00000488934 HSPA1AP0DMV8 641 aaKnown RBP6.22□□□□□ -1.41
SF3A3-207ENST00000488934 HSPA1BP0DMV9 641 aaKnown RBP6.22□□□□□ -1.41
SF3A3-207ENST00000488934 PRDX5P30044 214 aa6.22□□□□□ -1.41
SF3A3-207ENST00000488934 ADORA1P30542 326 aa6.22□□□□□ -1.41
SF3A3-207ENST00000488934 ZNF157P51786 506 aaPredicted RBP6.22□□□□□ -1.41
SF3A3-207ENST00000488934 RRP1P56182 461 aaKnown RBP6.22□□□□□ -1.41
SF3A3-207ENST00000488934 GRM1Q13255 1194 aa6.22□□□□□ -1.41
SF3A3-207ENST00000488934 MAP7Q14244 749 aa6.22□□□□□ -1.41
SF3A3-207ENST00000488934 CPSF6Q16630 551 aaKnown RBP eCLIP6.22□□□□□ -1.41
SF3A3-207ENST00000488934 SGO2Q562F6 1265 aa6.22□□□□□ -1.41
SF3A3-207ENST00000488934 CYP4F22Q6NT55 531 aa6.22□□□□□ -1.41
SF3A3-207ENST00000488934 FAM83AQ86UY5 434 aa6.22□□□□□ -1.41
SF3A3-207ENST00000488934 CERS3Q8IU89 383 aa6.22□□□□□ -1.41
SF3A3-207ENST00000488934 C2CD4AQ8NCU7 369 aaPredicted RBP6.22□□□□□ -1.41
SF3A3-207ENST00000488934 GLIS3Q8NEA6 775 aa6.22□□□□□ -1.41
SF3A3-207ENST00000488934 PRMT6Q96LA8 375 aaPredicted RBP6.22□□□□□ -1.41
SF3A3-207ENST00000488934 TRIM56Q9BRZ2 755 aaKnown RBP6.22□□□□□ -1.41
SF3A3-207ENST00000488934 NOL10Q9BSC4 688 aaKnown RBP6.22□□□□□ -1.41
SF3A3-207ENST00000488934 ZNF70Q9UC06 446 aaPredicted RBP6.22□□□□□ -1.41
SF3A3-207ENST00000488934 ABCF2Q9UG63 623 aa6.22□□□□□ -1.41
SF3A3-207ENST00000488934 AP4E1Q9UPM8 1137 aa6.22□□□□□ -1.41
SF3A3-207ENST00000488934 SAMM50Q9Y512 469 aa6.22□□□□□ -1.41
SF3A3-207ENST00000488934 OTOFQ9HC10 1997 aa6.21□□□□□ -1.42
SF3A3-207ENST00000488934 DLGAP3O95886 979 aa6.21□□□□□ -1.42
SF3A3-207ENST00000488934 LDHCP07864 332 aa6.21□□□□□ -1.42
SF3A3-207ENST00000488934 SLFN14P0C7P3 912 aa6.21□□□□□ -1.42
SF3A3-207ENST00000488934 DRD2P14416 443 aa6.21□□□□□ -1.42
SF3A3-207ENST00000488934 RASA3Q14644 834 aa6.21□□□□□ -1.42
SF3A3-207ENST00000488934 NFKBIBQ15653 356 aa6.21□□□□□ -1.42
SF3A3-207ENST00000488934 MAP3K11Q16584 847 aa6.21□□□□□ -1.42
SF3A3-207ENST00000488934 DCAF15Q66K64 600 aa6.21□□□□□ -1.42
SF3A3-207ENST00000488934 DYMQ7RTS9 669 aa6.21□□□□□ -1.42
SF3A3-207ENST00000488934 FRMD6Q96NE9 622 aa6.21□□□□□ -1.42
SF3A3-207ENST00000488934 EMILIN2Q9BXX0 1053 aa6.21□□□□□ -1.42
SF3A3-207ENST00000488934 CEP44Q9C0F1 390 aa6.21□□□□□ -1.42
SF3A3-207ENST00000488934 TDRD3Q9H7E2 651 aaKnown RBP6.21□□□□□ -1.42
SF3A3-207ENST00000488934 KRT82Q9NSB4 513 aa6.21□□□□□ -1.42
SF3A3-207ENST00000488934 LRP2BPQ9P2M1 347 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms