RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 MLXIPQ9HAP2 919 aa15.89■□□□□ 0.13
SPTLC1-207ENST00000488921 CNTNAP5Q8WYK1 1306 aa15.89■□□□□ 0.13
SPTLC1-207ENST00000488921 COL6A3P12111 3177 aa15.88■□□□□ 0.13
SPTLC1-207ENST00000488921 GOLGA8AA7E2F4 631 aa15.88■□□□□ 0.13
SPTLC1-207ENST00000488921 GOLGA8BA8MQT2 603 aa15.88■□□□□ 0.13
SPTLC1-207ENST00000488921 hCG_1984214I3L0E3 225 aa15.88■□□□□ 0.13
SPTLC1-207ENST00000488921 MEIS2O14770 477 aa15.88■□□□□ 0.13
SPTLC1-207ENST00000488921 FIBPO43427 364 aa15.88■□□□□ 0.13
SPTLC1-207ENST00000488921 PPFIA4O75335 1185 aa15.88■□□□□ 0.13
SPTLC1-207ENST00000488921 FGBP02675 491 aa15.88■□□□□ 0.13
SPTLC1-207ENST00000488921 CYP2C9P11712 490 aa15.88■□□□□ 0.13
SPTLC1-207ENST00000488921 HOXD8P13378 290 aaPredicted RBP15.88■□□□□ 0.13
SPTLC1-207ENST00000488921 ICAM3P32942 547 aa15.88■□□□□ 0.13
SPTLC1-207ENST00000488921 RFC2P35250 354 aa15.88■□□□□ 0.13
SPTLC1-207ENST00000488921 PSEN2P49810 448 aa15.88■□□□□ 0.13
SPTLC1-207ENST00000488921 MRPS9P82933 396 aaKnown RBP15.88■□□□□ 0.13
SPTLC1-207ENST00000488921 NEDD9Q14511 834 aa15.88■□□□□ 0.13
SPTLC1-207ENST00000488921 PTGISQ16647 500 aa15.88■□□□□ 0.13
SPTLC1-207ENST00000488921 RASIP1Q5U651 963 aa15.88■□□□□ 0.13
SPTLC1-207ENST00000488921 USP17L6PQ6QN14 398 aa15.88■□□□□ 0.13
SPTLC1-207ENST00000488921 C16orf59Q7L2K0 433 aa15.88■□□□□ 0.13
SPTLC1-207ENST00000488921 HEATR3Q7Z4Q2 680 aa15.88■□□□□ 0.13
SPTLC1-207ENST00000488921 CCDC82Q8N4S0 544 aa15.88■□□□□ 0.13
SPTLC1-207ENST00000488921 ZNF713Q8N859 430 aaPredicted RBP15.88■□□□□ 0.13
SPTLC1-207ENST00000488921 C7orf31Q8N865 590 aa15.88■□□□□ 0.13
SPTLC1-207ENST00000488921 RETREG2Q8NC44 543 aa15.88■□□□□ 0.13
SPTLC1-207ENST00000488921 CAGE1Q8TC20 777 aa15.88■□□□□ 0.13
SPTLC1-207ENST00000488921 HERVK_113Q902F9 699 aa15.88■□□□□ 0.13
SPTLC1-207ENST00000488921 KAT2BQ92831 832 aa15.88■□□□□ 0.13
SPTLC1-207ENST00000488921 TCEANC2Q96MN5 208 aa15.88■□□□□ 0.13
SPTLC1-207ENST00000488921 PSTPIP2Q9H939 334 aa15.88■□□□□ 0.13
SPTLC1-207ENST00000488921 EHMT1Q9H9B1 1298 aa15.88■□□□□ 0.13
SPTLC1-207ENST00000488921 KLF18A0A0U1RQI7 1052 aa15.87■□□□□ 0.13
SPTLC1-207ENST00000488921 SPDYE3A6NKU9 549 aa15.87■□□□□ 0.13
SPTLC1-207ENST00000488921 NOP56O00567 594 aaKnown RBP15.87■□□□□ 0.13
SPTLC1-207ENST00000488921 EPB41L2O43491 1005 aaKnown RBP15.87■□□□□ 0.13
SPTLC1-207ENST00000488921 ZNF286BP0CG31 522 aa15.87■□□□□ 0.13
SPTLC1-207ENST00000488921 DNAJB2P25686 324 aa15.87■□□□□ 0.13
SPTLC1-207ENST00000488921 HSPA4P34932 840 aa15.87■□□□□ 0.13
SPTLC1-207ENST00000488921 MFSD10Q14728 455 aa15.87■□□□□ 0.13
SPTLC1-207ENST00000488921 PPP1R18Q6NYC8 613 aa15.87■□□□□ 0.13
SPTLC1-207ENST00000488921 BLOC1S2Q6QNY1 142 aa15.87■□□□□ 0.13
SPTLC1-207ENST00000488921 NLRX1Q86UT6 975 aa15.87■□□□□ 0.13
SPTLC1-207ENST00000488921 KCNB2Q92953 911 aa15.87■□□□□ 0.13
SPTLC1-207ENST00000488921 SCLYQ96I15 445 aa15.87■□□□□ 0.13
SPTLC1-207ENST00000488921 CDHR1Q96JP9 859 aa15.87■□□□□ 0.13
SPTLC1-207ENST00000488921 FAM161BQ96MY7 647 aa15.87■□□□□ 0.13
SPTLC1-207ENST00000488921 JAKMIP1Q96N16 626 aaKnown RBP15.87■□□□□ 0.13
SPTLC1-207ENST00000488921 GTF2IRD1Q9UHL9 959 aa15.87■□□□□ 0.13
SPTLC1-207ENST00000488921 CCDC196A0A1B0GTZ2 297 aa15.86■□□□□ 0.13
SPTLC1-207ENST00000488921 ACTN1P12814 892 aa15.86■□□□□ 0.13
SPTLC1-207ENST00000488921 PSMA5P28066 241 aa15.86■□□□□ 0.13
SPTLC1-207ENST00000488921 KIAA0753Q2KHM9 967 aa15.86■□□□□ 0.13
SPTLC1-207ENST00000488921 HSDL1Q3SXM5 330 aa15.86■□□□□ 0.13
SPTLC1-207ENST00000488921 METTL7BQ6UX53 244 aa15.86■□□□□ 0.13
SPTLC1-207ENST00000488921 GIMAP8Q8ND71 665 aaPredicted RBP15.86■□□□□ 0.13
SPTLC1-207ENST00000488921 AFAP1L1Q8TED9 768 aa15.86■□□□□ 0.13
SPTLC1-207ENST00000488921 GUCD1Q96NT3 240 aa15.86■□□□□ 0.13
SPTLC1-207ENST00000488921 SEMA6BQ9H3T3 888 aa15.86■□□□□ 0.13
SPTLC1-207ENST00000488921 PPP4R2Q9NY27 417 aa15.86■□□□□ 0.13
SPTLC1-207ENST00000488921 BRPF3Q9ULD4 1205 aa15.86■□□□□ 0.13
SPTLC1-207ENST00000488921 NAP1L2Q9ULW6 460 aaPredicted RBP15.86■□□□□ 0.13
SPTLC1-207ENST00000488921 CDH23Q9H251 3354 aa15.85■□□□□ 0.13
SPTLC1-207ENST00000488921 hCG_1642624A0A1W2PR95 340 aa15.85■□□□□ 0.13
SPTLC1-207ENST00000488921 SPATA31C2B4DYI2 1134 aa15.85■□□□□ 0.13
SPTLC1-207ENST00000488921 HAS3O00219 553 aa15.85■□□□□ 0.13
SPTLC1-207ENST00000488921 PARNO95453 639 aaKnown RBP15.85■□□□□ 0.13
SPTLC1-207ENST00000488921 METAP2P50579 478 aaKnown RBP eCLIP15.85■□□□□ 0.13
SPTLC1-207ENST00000488921 NAPAP54920 295 aa15.85■□□□□ 0.13
SPTLC1-207ENST00000488921 SP2Q02086 613 aa15.85■□□□□ 0.13
SPTLC1-207ENST00000488921 RAB30Q15771 203 aa15.85■□□□□ 0.13
SPTLC1-207ENST00000488921 GDF6Q6KF10 455 aaPredicted RBP15.85■□□□□ 0.13
SPTLC1-207ENST00000488921 OTOP2Q7RTS6 562 aa15.85■□□□□ 0.13
SPTLC1-207ENST00000488921 PPP1R13LQ8WUF5 828 aa15.85■□□□□ 0.13
SPTLC1-207ENST00000488921 GPKOWQ92917 476 aaPredicted RBP eCLIP15.85■□□□□ 0.13
SPTLC1-207ENST00000488921 GPRASP2Q96D09 838 aa15.85■□□□□ 0.13
SPTLC1-207ENST00000488921 ZFP91Q96JP5 570 aaPredicted RBP15.85■□□□□ 0.13
SPTLC1-207ENST00000488921 SENP7Q9BQF6 1050 aa15.85■□□□□ 0.13
SPTLC1-207ENST00000488921 ALG1Q9BT22 464 aa15.85■□□□□ 0.13
SPTLC1-207ENST00000488921 GLT8D2Q9H1C3 349 aa15.85■□□□□ 0.13
SPTLC1-207ENST00000488921 RTEL1Q9NZ71 1219 aa15.85■□□□□ 0.13
SPTLC1-207ENST00000488921 SNX14Q9Y5W7 946 aa15.85■□□□□ 0.13
SPTLC1-207ENST00000488921 NID2Q14112 1375 aa15.85■□□□□ 0.13
SPTLC1-207ENST00000488921 KAT6AQ92794 2004 aa15.84■□□□□ 0.13
SPTLC1-207ENST00000488921 SORBS3O60504 671 aa15.84■□□□□ 0.13
SPTLC1-207ENST00000488921 IQCF3P0C7M6 154 aa15.84■□□□□ 0.13
SPTLC1-207ENST00000488921 UBE2SQ16763 222 aa15.84■□□□□ 0.13
SPTLC1-207ENST00000488921 WWC2Q6AWC2 1192 aa15.84■□□□□ 0.13
SPTLC1-207ENST00000488921 Q6ZUG5 572 aa15.84■□□□□ 0.13
SPTLC1-207ENST00000488921 FBXL16Q8N461 479 aa15.84■□□□□ 0.13
SPTLC1-207ENST00000488921 TIFAQ96CG3 184 aa15.84■□□□□ 0.13
SPTLC1-207ENST00000488921 USP26Q9BXU7 913 aa15.84■□□□□ 0.13
SPTLC1-207ENST00000488921 TTYH1Q9H313 450 aaPredicted RBP15.84■□□□□ 0.13
SPTLC1-207ENST00000488921 HDAC6Q9UBN7 1215 aa15.84■□□□□ 0.13
SPTLC1-207ENST00000488921 ZBBXA8MT70 800 aa15.83■□□□□ 0.12
SPTLC1-207ENST00000488921 LGALS2P05162 132 aa15.83■□□□□ 0.12
SPTLC1-207ENST00000488921 RPS6KB1P23443 525 aa15.83■□□□□ 0.12
SPTLC1-207ENST00000488921 RBL2Q08999 1139 aa15.83■□□□□ 0.12
SPTLC1-207ENST00000488921 FUT2Q10981 343 aa15.83■□□□□ 0.12
SPTLC1-207ENST00000488921 SEMA3FQ13275 785 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms