RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 GOLPH3Q9H4A6 298 aa14.07□□□□□ -0.16
CLIC4-202ENST00000488683 LRRC37AA6NMS7 1700 aa14.07□□□□□ -0.16
CLIC4-202ENST00000488683 POTEFA5A3E0 1075 aa14.07□□□□□ -0.16
CLIC4-202ENST00000488683 TRAF5O00463 557 aa14.07□□□□□ -0.16
CLIC4-202ENST00000488683 POTEIP0CG38 1075 aa14.07□□□□□ -0.16
CLIC4-202ENST00000488683 ADRA2BP18089 450 aa14.07□□□□□ -0.16
CLIC4-202ENST00000488683 KIF11P52732 1056 aa14.07□□□□□ -0.16
CLIC4-202ENST00000488683 RBM5P52756 815 aaKnown RBP eCLIP14.07□□□□□ -0.16
CLIC4-202ENST00000488683 NAP1L1P55209 391 aaKnown RBP14.07□□□□□ -0.16
CLIC4-202ENST00000488683 PSMC6P62333 389 aa14.07□□□□□ -0.16
CLIC4-202ENST00000488683 ZNF543Q08ER8 600 aa14.07□□□□□ -0.16
CLIC4-202ENST00000488683 ASPRV1Q53RT3 343 aa14.07□□□□□ -0.16
CLIC4-202ENST00000488683 POTEGQ6S5H5 508 aa14.07□□□□□ -0.16
CLIC4-202ENST00000488683 POTEEQ6S8J3 1075 aa14.07□□□□□ -0.16
CLIC4-202ENST00000488683 HDXQ7Z353 690 aa14.07□□□□□ -0.16
CLIC4-202ENST00000488683 IFIH1Q9BYX4 1025 aaKnown RBP14.07□□□□□ -0.16
CLIC4-202ENST00000488683 DNAJC18Q9H819 358 aa14.07□□□□□ -0.16
CLIC4-202ENST00000488683 SIK3Q9Y2K2 1263 aa14.07□□□□□ -0.16
CLIC4-202ENST00000488683 KRT86O43790 486 aa14.06□□□□□ -0.16
CLIC4-202ENST00000488683 HOXA10P31260 410 aaPredicted RBP14.06□□□□□ -0.16
CLIC4-202ENST00000488683 SLC1A4P43007 532 aa14.06□□□□□ -0.16
CLIC4-202ENST00000488683 CASP5P51878 434 aa14.06□□□□□ -0.16
CLIC4-202ENST00000488683 KCNMA1Q12791 1236 aa14.06□□□□□ -0.16
CLIC4-202ENST00000488683 COBLL1Q53SF7 1204 aa14.06□□□□□ -0.16
CLIC4-202ENST00000488683 TDRD12Q587J7 1177 aaKnown RBP14.06□□□□□ -0.16
CLIC4-202ENST00000488683 CDC42EP5Q6NZY7 148 aa14.06□□□□□ -0.16
CLIC4-202ENST00000488683 FAM114A1Q8IWE2 563 aa14.06□□□□□ -0.16
CLIC4-202ENST00000488683 SLF2Q8IX21 1173 aa14.06□□□□□ -0.16
CLIC4-202ENST00000488683 SEPT12Q8IYM1 358 aa14.06□□□□□ -0.16
CLIC4-202ENST00000488683 GJD4Q96KN9 370 aaPredicted RBP14.06□□□□□ -0.16
CLIC4-202ENST00000488683 NUP58Q9BVL2 599 aa14.06□□□□□ -0.16
CLIC4-202ENST00000488683 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.06□□□□□ -0.16
CLIC4-202ENST00000488683 PCDHA13Q9Y5I0 950 aa14.06□□□□□ -0.16
CLIC4-202ENST00000488683 EIF3CLB5ME19 914 aaKnown RBP14.06□□□□□ -0.16
CLIC4-202ENST00000488683 POLRMTO00411 1230 aaKnown RBP14.06□□□□□ -0.16
CLIC4-202ENST00000488683 AKR1B10O60218 316 aa14.06□□□□□ -0.16
CLIC4-202ENST00000488683 ACTN1P12814 892 aa14.06□□□□□ -0.16
CLIC4-202ENST00000488683 CYLC1P35663 651 aaPredicted RBP14.06□□□□□ -0.16
CLIC4-202ENST00000488683 COASYQ13057 564 aa14.06□□□□□ -0.16
CLIC4-202ENST00000488683 MEX3CQ5U5Q3 659 aaKnown RBP14.06□□□□□ -0.16
CLIC4-202ENST00000488683 KRT79Q5XKE5 535 aa14.06□□□□□ -0.16
CLIC4-202ENST00000488683 SPICE1Q8N0Z3 855 aa14.06□□□□□ -0.16
CLIC4-202ENST00000488683 RETREG2Q8NC44 543 aa14.06□□□□□ -0.16
CLIC4-202ENST00000488683 EIF3CQ99613 913 aaKnown RBP14.06□□□□□ -0.16
CLIC4-202ENST00000488683 STK17AQ9UEE5 414 aa14.06□□□□□ -0.16
CLIC4-202ENST00000488683 LCMT1Q9UIC8 334 aa14.06□□□□□ -0.16
CLIC4-202ENST00000488683 SERPINB13Q9UIV8 391 aa14.06□□□□□ -0.16
CLIC4-202ENST00000488683 DDTLA6NHG4 134 aaPredicted RBP14.06□□□□□ -0.16
CLIC4-202ENST00000488683 PPEF1O14829 653 aaPredicted RBP14.06□□□□□ -0.16
CLIC4-202ENST00000488683 TTLL1O95922 423 aa14.06□□□□□ -0.16
CLIC4-202ENST00000488683 CLK2P49760 499 aaKnown RBP14.06□□□□□ -0.16
CLIC4-202ENST00000488683 USP14P54578 494 aa14.06□□□□□ -0.16
CLIC4-202ENST00000488683 KRT83P78385 493 aa14.06□□□□□ -0.16
CLIC4-202ENST00000488683 EHHADHQ08426 723 aa14.06□□□□□ -0.16
CLIC4-202ENST00000488683 PAPD7Q5XG87 772 aaKnown RBP14.06□□□□□ -0.16
CLIC4-202ENST00000488683 LRRC55Q6ZSA7 311 aa14.06□□□□□ -0.16
CLIC4-202ENST00000488683 CYP2W1Q8TAV3 490 aa14.06□□□□□ -0.16
CLIC4-202ENST00000488683 SECISBP2LQ93073 1101 aaKnown RBP14.06□□□□□ -0.16
CLIC4-202ENST00000488683 DMGDHQ9UI17 866 aaKnown RBP14.06□□□□□ -0.16
CLIC4-202ENST00000488683 ANKRD31Q8N7Z5 1873 aa14.05□□□□□ -0.16
CLIC4-202ENST00000488683 ZSCAN5CA6NGD5 496 aaPredicted RBP14.05□□□□□ -0.16
CLIC4-202ENST00000488683 SFI1A8K8P3 1242 aa14.05□□□□□ -0.16
CLIC4-202ENST00000488683 POTEB2H3BUK9 544 aa14.05□□□□□ -0.16
CLIC4-202ENST00000488683 IPO7O95373 1038 aaKnown RBP14.05□□□□□ -0.16
CLIC4-202ENST00000488683 HOXA13P31271 388 aaPredicted RBP14.05□□□□□ -0.16
CLIC4-202ENST00000488683 CYP4A11Q02928 519 aa14.05□□□□□ -0.16
CLIC4-202ENST00000488683 KIF5AQ12840 1032 aa14.05□□□□□ -0.16
CLIC4-202ENST00000488683 ORC2Q13416 577 aaPredicted RBP14.05□□□□□ -0.16
CLIC4-202ENST00000488683 TMEM266Q2M3C6 531 aa14.05□□□□□ -0.16
CLIC4-202ENST00000488683 TMEM119Q4V9L6 283 aa14.05□□□□□ -0.16
CLIC4-202ENST00000488683 MTMR8Q96EF0 704 aa14.05□□□□□ -0.16
CLIC4-202ENST00000488683 LRRC1Q9BTT6 524 aa14.05□□□□□ -0.16
CLIC4-202ENST00000488683 PACSIN1Q9BY11 444 aa14.05□□□□□ -0.16
CLIC4-202ENST00000488683 PSTPIP2Q9H939 334 aa14.05□□□□□ -0.16
CLIC4-202ENST00000488683 RIC8AQ9NPQ8 531 aa14.05□□□□□ -0.16
CLIC4-202ENST00000488683 PCDHA12Q9UN75 941 aa14.05□□□□□ -0.16
CLIC4-202ENST00000488683 PNMA6FA0A0J9YX94 578 aa14.05□□□□□ -0.16
CLIC4-202ENST00000488683 PVALEFA0A1B0GWK0 134 aa14.05□□□□□ -0.16
CLIC4-202ENST00000488683 hCG_1984214I3L0E3 225 aa14.05□□□□□ -0.16
CLIC4-202ENST00000488683 UBXN2AP68543 259 aa14.05□□□□□ -0.16
CLIC4-202ENST00000488683 JAG1P78504 1218 aa14.05□□□□□ -0.16
CLIC4-202ENST00000488683 CCDC40Q4G0X9 1142 aa14.05□□□□□ -0.16
CLIC4-202ENST00000488683 FIGNQ5HY92 759 aa14.05□□□□□ -0.16
CLIC4-202ENST00000488683 ZNF662Q6ZS27 426 aa14.05□□□□□ -0.16
CLIC4-202ENST00000488683 CACNA2D4Q7Z3S7 1137 aa14.05□□□□□ -0.16
CLIC4-202ENST00000488683 ZNF713Q8N859 430 aaPredicted RBP14.05□□□□□ -0.16
CLIC4-202ENST00000488683 DNAJC19Q96DA6 116 aa14.05□□□□□ -0.16
CLIC4-202ENST00000488683 PURBQ96QR8 312 aaKnown RBP14.05□□□□□ -0.16
CLIC4-202ENST00000488683 PANK4Q9NVE7 773 aa14.05□□□□□ -0.16
CLIC4-202ENST00000488683 SCAF8Q9UPN6 1271 aaKnown RBP14.05□□□□□ -0.16
CLIC4-202ENST00000488683 BCS1LQ9Y276 419 aa14.05□□□□□ -0.16
CLIC4-202ENST00000488683 GREB1LQ9C091 1923 aaPredicted RBP14.04□□□□□ -0.16
CLIC4-202ENST00000488683 A0A1W2PQJ5 194 aa14.04□□□□□ -0.16
CLIC4-202ENST00000488683 G3V3G9 751 aa14.04□□□□□ -0.16
CLIC4-202ENST00000488683 MED24O75448 989 aa14.04□□□□□ -0.16
CLIC4-202ENST00000488683 POLD1P28340 1107 aa14.04□□□□□ -0.16
CLIC4-202ENST00000488683 POLR2FP61218 127 aaKnown RBP14.04□□□□□ -0.16
CLIC4-202ENST00000488683 SPA17Q15506 151 aa14.04□□□□□ -0.16
CLIC4-202ENST00000488683 QRICH1Q2TAL8 776 aa14.04□□□□□ -0.16
CLIC4-202ENST00000488683 DCAF8Q5TAQ9 597 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms