RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 KAT2BQ92831 832 aa18.31■□□□□ 0.52
CTDSP1-209ENST00000488627 LBHD1Q9BQE6 289 aaPredicted RBP18.31■□□□□ 0.52
CTDSP1-209ENST00000488627 UBE2OQ9C0C9 1292 aaKnown RBP18.31■□□□□ 0.52
CTDSP1-209ENST00000488627 ADAMTS3O15072 1205 aa18.3■□□□□ 0.52
CTDSP1-209ENST00000488627 EIF5BO60841 1220 aaKnown RBP18.3■□□□□ 0.52
CTDSP1-209ENST00000488627 PPFIA3O75145 1194 aa18.3■□□□□ 0.52
CTDSP1-209ENST00000488627 GGPS1O95749 300 aa18.3■□□□□ 0.52
CTDSP1-209ENST00000488627 CLK2P49760 499 aaKnown RBP18.3■□□□□ 0.52
CTDSP1-209ENST00000488627 NBPF20Q3BBV1 942 aa18.3■□□□□ 0.52
CTDSP1-209ENST00000488627 HSDL1Q3SXM5 330 aa18.3■□□□□ 0.52
CTDSP1-209ENST00000488627 C8orf34Q49A92 452 aa18.3■□□□□ 0.52
CTDSP1-209ENST00000488627 RNF26Q9BY78 433 aaPredicted RBP18.3■□□□□ 0.52
CTDSP1-209ENST00000488627 TRPV6Q9H1D0 765 aa18.3■□□□□ 0.52
CTDSP1-209ENST00000488627 ESYT2A0FGR8 921 aa18.29■□□□□ 0.52
CTDSP1-209ENST00000488627 SPDYE3A6NKU9 549 aa18.29■□□□□ 0.52
CTDSP1-209ENST00000488627 FIBPO43427 364 aa18.29■□□□□ 0.52
CTDSP1-209ENST00000488627 B4GALT4O60513 344 aa18.29■□□□□ 0.52
CTDSP1-209ENST00000488627 TIMP1P01033 207 aa18.29■□□□□ 0.52
CTDSP1-209ENST00000488627 RAG1P15918 1043 aa18.29■□□□□ 0.52
CTDSP1-209ENST00000488627 ITGB5P18084 799 aa18.29■□□□□ 0.52
CTDSP1-209ENST00000488627 ADCY7P51828 1080 aa18.29■□□□□ 0.52
CTDSP1-209ENST00000488627 DGKDQ16760 1214 aa18.29■□□□□ 0.52
CTDSP1-209ENST00000488627 GNPTABQ3T906 1256 aa18.29■□□□□ 0.52
CTDSP1-209ENST00000488627 TDHQ8IZJ6 230 aa18.29■□□□□ 0.52
CTDSP1-209ENST00000488627 SLC26A6Q9BXS9 759 aa18.29■□□□□ 0.52
CTDSP1-209ENST00000488627 ZMYND12Q9H0C1 365 aa18.29■□□□□ 0.52
CTDSP1-209ENST00000488627 TPCN1Q9ULQ1 816 aa18.29■□□□□ 0.52
CTDSP1-209ENST00000488627 UBIAD1Q9Y5Z9 338 aa18.29■□□□□ 0.52
CTDSP1-209ENST00000488627 LAMA3Q16787 3333 aa18.29■□□□□ 0.52
CTDSP1-209ENST00000488627 TLR3O15455 904 aaKnown RBP18.28■□□□□ 0.52
CTDSP1-209ENST00000488627 SORBS3O60504 671 aa18.28■□□□□ 0.52
CTDSP1-209ENST00000488627 PPFIA4O75335 1185 aa18.28■□□□□ 0.52
CTDSP1-209ENST00000488627 FOSP01100 380 aaPredicted RBP18.28■□□□□ 0.52
CTDSP1-209ENST00000488627 NFRKBQ6P4R8 1299 aa18.28■□□□□ 0.52
CTDSP1-209ENST00000488627 PPP1R13LQ8WUF5 828 aa18.28■□□□□ 0.52
CTDSP1-209ENST00000488627 PGBD1Q96JS3 809 aa18.28■□□□□ 0.52
CTDSP1-209ENST00000488627 SPATA33Q96N06 139 aa18.28■□□□□ 0.52
CTDSP1-209ENST00000488627 SENP7Q9BQF6 1050 aa18.28■□□□□ 0.52
CTDSP1-209ENST00000488627 GLT8D2Q9H1C3 349 aa18.28■□□□□ 0.52
CTDSP1-209ENST00000488627 TMEM260Q9NX78 707 aa18.28■□□□□ 0.52
CTDSP1-209ENST00000488627 ATP9AO75110 1047 aa18.27■□□□□ 0.52
CTDSP1-209ENST00000488627 EPHB4P54760 987 aa18.27■□□□□ 0.52
CTDSP1-209ENST00000488627 AK2P54819 239 aa18.27■□□□□ 0.52
CTDSP1-209ENST00000488627 STK3Q13188 491 aa18.27■□□□□ 0.52
CTDSP1-209ENST00000488627 GPRASP2Q96D09 838 aa18.27■□□□□ 0.52
CTDSP1-209ENST00000488627 ANO3Q9BYT9 981 aa18.27■□□□□ 0.52
CTDSP1-209ENST00000488627 MLXIPQ9HAP2 919 aa18.27■□□□□ 0.52
CTDSP1-209ENST00000488627 JADE2Q9NQC1 790 aa18.27■□□□□ 0.52
CTDSP1-209ENST00000488627 TRMT13Q9NUP7 481 aaKnown RBP18.27■□□□□ 0.52
CTDSP1-209ENST00000488627 TELO2Q9Y4R8 837 aa18.27■□□□□ 0.52
CTDSP1-209ENST00000488627 HAS3O00219 553 aa18.26■□□□□ 0.51
CTDSP1-209ENST00000488627 SOX1O00570 391 aaPredicted RBP18.26■□□□□ 0.51
CTDSP1-209ENST00000488627 F2P00734 622 aa18.26■□□□□ 0.51
CTDSP1-209ENST00000488627 AKAP17AQ02040 695 aaKnown RBP18.26■□□□□ 0.51
CTDSP1-209ENST00000488627 SCRN1Q12765 414 aa18.26■□□□□ 0.51
CTDSP1-209ENST00000488627 AP3B2Q13367 1082 aa18.26■□□□□ 0.51
CTDSP1-209ENST00000488627 NEDD9Q14511 834 aa18.26■□□□□ 0.51
CTDSP1-209ENST00000488627 MFSD5Q6N075 450 aa18.26■□□□□ 0.51
CTDSP1-209ENST00000488627 METTL7BQ6UX53 244 aa18.26■□□□□ 0.51
CTDSP1-209ENST00000488627 CYFIP1Q7L576 1253 aa18.26■□□□□ 0.51
CTDSP1-209ENST00000488627 NLRX1Q86UT6 975 aa18.26■□□□□ 0.51
CTDSP1-209ENST00000488627 CYP2W1Q8TAV3 490 aa18.26■□□□□ 0.51
CTDSP1-209ENST00000488627 CRYGNQ8WXF5 182 aa18.26■□□□□ 0.51
CTDSP1-209ENST00000488627 C16orf70Q9BSU1 422 aa18.26■□□□□ 0.51
CTDSP1-209ENST00000488627 PFKFB2O60825 505 aa18.25■□□□□ 0.51
CTDSP1-209ENST00000488627 KCNA2P16389 499 aa18.25■□□□□ 0.51
CTDSP1-209ENST00000488627 SREBF1P36956 1147 aa18.25■□□□□ 0.51
CTDSP1-209ENST00000488627 PTPN11Q06124 597 aaPredicted RBP18.25■□□□□ 0.51
CTDSP1-209ENST00000488627 SHHQ15465 462 aa18.25■□□□□ 0.51
CTDSP1-209ENST00000488627 LRIT3Q3SXY7 679 aa18.25■□□□□ 0.51
CTDSP1-209ENST00000488627 C9orf50Q5SZB4 431 aa18.25■□□□□ 0.51
CTDSP1-209ENST00000488627 JAKMIP3Q5VZ66 844 aa18.25■□□□□ 0.51
CTDSP1-209ENST00000488627 SESTD1Q86VW0 696 aa18.25■□□□□ 0.51
CTDSP1-209ENST00000488627 CTAGE1Q96RT6 745 aa18.25■□□□□ 0.51
CTDSP1-209ENST00000488627 MXRA8Q9BRK3 442 aa18.25■□□□□ 0.51
CTDSP1-209ENST00000488627 NOC4LQ9BVI4 516 aaKnown RBP18.25■□□□□ 0.51
CTDSP1-209ENST00000488627 VPS54Q9P1Q0 977 aa18.25■□□□□ 0.51
CTDSP1-209ENST00000488627 UMODL1Q5DID0 1318 aa18.24■□□□□ 0.51
CTDSP1-209ENST00000488627 MAFGO15525 162 aa18.24■□□□□ 0.51
CTDSP1-209ENST00000488627 ZNF286BP0CG31 522 aa18.24■□□□□ 0.51
CTDSP1-209ENST00000488627 CYP2C9P11712 490 aa18.24■□□□□ 0.51
CTDSP1-209ENST00000488627 CYP2C18P33260 490 aa18.24■□□□□ 0.51
CTDSP1-209ENST00000488627 SSRP1Q08945 709 aaKnown RBP18.24■□□□□ 0.51
CTDSP1-209ENST00000488627 ANKRD1Q15327 319 aa18.24■□□□□ 0.51
CTDSP1-209ENST00000488627 C16orf59Q7L2K0 433 aa18.24■□□□□ 0.51
CTDSP1-209ENST00000488627 CCDC12Q8WUD4 166 aaPredicted RBP18.24■□□□□ 0.51
CTDSP1-209ENST00000488627 GPR20Q99678 358 aa18.24■□□□□ 0.51
CTDSP1-209ENST00000488627 PPP1R12CQ9BZL4 782 aa18.24■□□□□ 0.51
CTDSP1-209ENST00000488627 SLKQ9H2G2 1235 aaPredicted RBP18.24■□□□□ 0.51
CTDSP1-209ENST00000488627 HIPK3Q9H422 1215 aa18.24■□□□□ 0.51
CTDSP1-209ENST00000488627 EHMT1Q9H9B1 1298 aa18.24■□□□□ 0.51
CTDSP1-209ENST00000488627 C6orf50Q9HD87 102 aa18.24■□□□□ 0.51
CTDSP1-209ENST00000488627 SH3GLB2Q9NR46 395 aa18.24■□□□□ 0.51
CTDSP1-209ENST00000488627 SCN10AQ9Y5Y9 1956 aa18.24■□□□□ 0.51
CTDSP1-209ENST00000488627 KIAA1217Q5T5P2 1943 aa18.23■□□□□ 0.51
CTDSP1-209ENST00000488627 MEIS1O00470 390 aa18.23■□□□□ 0.51
CTDSP1-209ENST00000488627 CPLX1O14810 134 aa18.23■□□□□ 0.51
CTDSP1-209ENST00000488627 EDIL3O43854 480 aa18.23■□□□□ 0.51
CTDSP1-209ENST00000488627 CTDNEP1O95476 244 aa18.23■□□□□ 0.51
CTDSP1-209ENST00000488627 SUPT20HL2P0C7V6 817 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms