RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 MROH5Q6ZUA9 1318 aa7.9□□□□□ -1.14
TNFSF4-203ENST00000488053 INHBEP58166 350 aa7.9□□□□□ -1.14
TNFSF4-203ENST00000488053 CAP1Q01518 475 aa7.9□□□□□ -1.14
TNFSF4-203ENST00000488053 TNFAIP1Q13829 316 aa7.9□□□□□ -1.14
TNFSF4-203ENST00000488053 PDZD3Q86UT5 571 aa7.9□□□□□ -1.14
TNFSF4-203ENST00000488053 ANKRD44Q8N8A2 993 aa7.9□□□□□ -1.14
TNFSF4-203ENST00000488053 PTPN18Q99952 460 aa7.9□□□□□ -1.14
TNFSF4-203ENST00000488053 CBX8Q9HC52 389 aa7.9□□□□□ -1.14
TNFSF4-203ENST00000488053 CYP8B1Q9UNU6 501 aa7.9□□□□□ -1.14
TNFSF4-203ENST00000488053 BRCA2P51587 3418 aa7.9□□□□□ -1.14
TNFSF4-203ENST00000488053 UTYO14607 1347 aa7.89□□□□□ -1.15
TNFSF4-203ENST00000488053 SYNGAP1Q96PV0 1343 aa7.89□□□□□ -1.15
TNFSF4-203ENST00000488053 CCL15-CCL14A0A0B4J2E2 113 aa7.89□□□□□ -1.15
TNFSF4-203ENST00000488053 ECEL1O95672 775 aa7.89□□□□□ -1.15
TNFSF4-203ENST00000488053 CTSBP07858 339 aa7.89□□□□□ -1.15
TNFSF4-203ENST00000488053 BMP6P22004 513 aa7.89□□□□□ -1.15
TNFSF4-203ENST00000488053 ZEB1P37275 1124 aaPredicted RBP7.89□□□□□ -1.15
TNFSF4-203ENST00000488053 RPS26P62854 115 aaKnown RBP7.89□□□□□ -1.15
TNFSF4-203ENST00000488053 ZNF252P-AS1Q0IIN9 211 aa7.89□□□□□ -1.15
TNFSF4-203ENST00000488053 VGLL4Q14135 290 aa7.89□□□□□ -1.15
TNFSF4-203ENST00000488053 CCL15Q16663 113 aa7.89□□□□□ -1.15
TNFSF4-203ENST00000488053 UVSSAQ2YD98 709 aa7.89□□□□□ -1.15
TNFSF4-203ENST00000488053 CAVIN4Q5BKX8 364 aa7.89□□□□□ -1.15
TNFSF4-203ENST00000488053 OTUD7BQ6GQQ9 843 aa7.89□□□□□ -1.15
TNFSF4-203ENST00000488053 TTBK2Q6IQ55 1244 aa7.89□□□□□ -1.15
TNFSF4-203ENST00000488053 LLGL2Q6P1M3 1020 aa7.89□□□□□ -1.15
TNFSF4-203ENST00000488053 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.89□□□□□ -1.15
TNFSF4-203ENST00000488053 STK35Q8TDR2 534 aa7.89□□□□□ -1.15
TNFSF4-203ENST00000488053 KCNB2Q92953 911 aa7.89□□□□□ -1.15
TNFSF4-203ENST00000488053 MRRFQ96E11 262 aaKnown RBP7.89□□□□□ -1.15
TNFSF4-203ENST00000488053 ERO1AQ96HE7 468 aa7.89□□□□□ -1.15
TNFSF4-203ENST00000488053 TEPSINQ96N21 525 aa7.89□□□□□ -1.15
TNFSF4-203ENST00000488053 SPOCK3Q9BQ16 436 aa7.89□□□□□ -1.15
TNFSF4-203ENST00000488053 CCDC86Q9H6F5 360 aaKnown RBP7.89□□□□□ -1.15
TNFSF4-203ENST00000488053 RAD18Q9NS91 495 aa7.89□□□□□ -1.15
TNFSF4-203ENST00000488053 PTPN22Q9Y2R2 807 aa7.89□□□□□ -1.15
TNFSF4-203ENST00000488053 KIAA0100Q14667 2235 aaKnown RBP7.88□□□□□ -1.15
TNFSF4-203ENST00000488053 SART1O43290 800 aaKnown RBP7.88□□□□□ -1.15
TNFSF4-203ENST00000488053 PROCP04070 461 aa7.88□□□□□ -1.15
TNFSF4-203ENST00000488053 TNNI2P48788 182 aa7.88□□□□□ -1.15
TNFSF4-203ENST00000488053 SP3Q02447 781 aa7.88□□□□□ -1.15
TNFSF4-203ENST00000488053 TSNAXIP1Q2TAA8 658 aa7.88□□□□□ -1.15
TNFSF4-203ENST00000488053 RABL6Q3YEC7 729 aaPredicted RBP7.88□□□□□ -1.15
TNFSF4-203ENST00000488053 FAM43AQ8N2R8 423 aa7.88□□□□□ -1.15
TNFSF4-203ENST00000488053 VGLL2Q8N8G2 317 aa7.88□□□□□ -1.15
TNFSF4-203ENST00000488053 TMEM87AQ8NBN3 555 aa7.88□□□□□ -1.15
TNFSF4-203ENST00000488053 BRI3BPQ8WY22 251 aa7.88□□□□□ -1.15
TNFSF4-203ENST00000488053 SSH1Q8WYL5 1049 aa7.88□□□□□ -1.15
TNFSF4-203ENST00000488053 TEKT1Q969V4 418 aa7.88□□□□□ -1.15
TNFSF4-203ENST00000488053 MEGF10Q96KG7 1140 aa7.88□□□□□ -1.15
TNFSF4-203ENST00000488053 SSBP4Q9BWG4 385 aaPredicted RBP7.88□□□□□ -1.15
TNFSF4-203ENST00000488053 BACH2Q9BYV9 841 aa7.88□□□□□ -1.15
TNFSF4-203ENST00000488053 CSADQ9Y600 493 aa7.88□□□□□ -1.15
TNFSF4-203ENST00000488053 PTPRCP08575 1304 aa7.87□□□□□ -1.15
TNFSF4-203ENST00000488053 ZNF521Q96K83 1311 aa7.87□□□□□ -1.15
TNFSF4-203ENST00000488053 UNCXA6NJT0 531 aa7.87□□□□□ -1.15
TNFSF4-203ENST00000488053 PDE8BO95263 885 aa7.87□□□□□ -1.15
TNFSF4-203ENST00000488053 TIAF1O95411 115 aa7.87□□□□□ -1.15
TNFSF4-203ENST00000488053 IFIT1P09914 478 aaKnown RBP7.87□□□□□ -1.15
TNFSF4-203ENST00000488053 SLFN14P0C7P3 912 aa7.87□□□□□ -1.15
TNFSF4-203ENST00000488053 LIG3P49916 1009 aa7.87□□□□□ -1.15
TNFSF4-203ENST00000488053 GTF2A2P52657 109 aa7.87□□□□□ -1.15
TNFSF4-203ENST00000488053 PWP1Q13610 501 aa7.87□□□□□ -1.15
TNFSF4-203ENST00000488053 PUM3Q15397 648 aaKnown RBP7.87□□□□□ -1.15
TNFSF4-203ENST00000488053 MIGA2Q7L4E1 593 aa7.87□□□□□ -1.15
TNFSF4-203ENST00000488053 C12orf50Q8NA57 414 aaPredicted RBP7.87□□□□□ -1.15
TNFSF4-203ENST00000488053 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.87□□□□□ -1.15
TNFSF4-203ENST00000488053 TBC1D22AQ8WUA7 517 aa7.87□□□□□ -1.15
TNFSF4-203ENST00000488053 ZKSCAN4Q969J2 545 aaPredicted RBP7.87□□□□□ -1.15
TNFSF4-203ENST00000488053 FAM46AQ96IP4 442 aaKnown RBP7.87□□□□□ -1.15
TNFSF4-203ENST00000488053 WRNIP1Q96S55 665 aa7.87□□□□□ -1.15
TNFSF4-203ENST00000488053 USP44Q9H0E7 712 aa7.87□□□□□ -1.15
TNFSF4-203ENST00000488053 SIL1Q9H173 461 aa7.87□□□□□ -1.15
TNFSF4-203ENST00000488053 TMOD2Q9NZR1 351 aa7.87□□□□□ -1.15
TNFSF4-203ENST00000488053 RBBP6Q7Z6E9 1792 aaKnown RBP7.87□□□□□ -1.15
TNFSF4-203ENST00000488053 ADH5P11766 374 aa7.86□□□□□ -1.15
TNFSF4-203ENST00000488053 SLC5A1P13866 664 aa7.86□□□□□ -1.15
TNFSF4-203ENST00000488053 EN2P19622 333 aaPredicted RBP7.86□□□□□ -1.15
TNFSF4-203ENST00000488053 FGFR2P21802 821 aa7.86□□□□□ -1.15
TNFSF4-203ENST00000488053 SOX4Q06945 474 aaPredicted RBP7.86□□□□□ -1.15
TNFSF4-203ENST00000488053 TCP10Q12799 353 aa7.86□□□□□ -1.15
TNFSF4-203ENST00000488053 APOBEC3HQ6NTF7 200 aaKnown RBP7.86□□□□□ -1.15
TNFSF4-203ENST00000488053 AGMOQ6ZNB7 445 aa7.86□□□□□ -1.15
TNFSF4-203ENST00000488053 UBL7Q96S82 380 aaPredicted RBP7.86□□□□□ -1.15
TNFSF4-203ENST00000488053 WDR18Q9BV38 432 aa7.86□□□□□ -1.15
TNFSF4-203ENST00000488053 ARHGAP39Q9C0H5 1083 aa7.86□□□□□ -1.15
TNFSF4-203ENST00000488053 METTL5Q9NRN9 209 aaKnown RBP7.86□□□□□ -1.15
TNFSF4-203ENST00000488053 KIAA1522Q9P206 1035 aaPredicted RBP7.86□□□□□ -1.15
TNFSF4-203ENST00000488053 PTCH2Q9Y6C5 1203 aa7.86□□□□□ -1.15
TNFSF4-203ENST00000488053 SNCAIPQ9Y6H5 919 aa7.86□□□□□ -1.15
TNFSF4-203ENST00000488053 E9PSI1 815 aa7.85□□□□□ -1.15
TNFSF4-203ENST00000488053 EYA2O00167 538 aa7.85□□□□□ -1.15
TNFSF4-203ENST00000488053 GAS2O43903 313 aaKnown RBP7.85□□□□□ -1.15
TNFSF4-203ENST00000488053 ZNF862O60290 1169 aa7.85□□□□□ -1.15
TNFSF4-203ENST00000488053 RECKO95980 971 aa7.85□□□□□ -1.15
TNFSF4-203ENST00000488053 LIG1P18858 919 aa7.85□□□□□ -1.15
TNFSF4-203ENST00000488053 PREPP48147 710 aa7.85□□□□□ -1.15
TNFSF4-203ENST00000488053 RFX5P48382 616 aaPredicted RBP7.85□□□□□ -1.15
TNFSF4-203ENST00000488053 HDLBPQ00341 1268 aaKnown RBP7.85□□□□□ -1.15
TNFSF4-203ENST00000488053 INTS3Q68E01 1043 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms