RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 GCM1Q9NP62 436 aa7.1□□□□□ -1.27
BRCA1-217ENST00000487825 IMPACTQ9P2X3 320 aa7.1□□□□□ -1.27
BRCA1-217ENST00000487825 MYOM3Q5VTT5 1437 aa7.1□□□□□ -1.27
BRCA1-217ENST00000487825 NPHP3Q7Z494 1330 aa7.09□□□□□ -1.27
BRCA1-217ENST00000487825 A0A1W2PQ27 194 aa7.09□□□□□ -1.27
BRCA1-217ENST00000487825 A0A1W2PQ64 194 aa7.09□□□□□ -1.27
BRCA1-217ENST00000487825 A0A1W2PQC6 194 aa7.09□□□□□ -1.27
BRCA1-217ENST00000487825 A0A1W2PQD8 194 aa7.09□□□□□ -1.27
BRCA1-217ENST00000487825 NUAK1O60285 661 aa7.09□□□□□ -1.27
BRCA1-217ENST00000487825 IFNGR1P15260 489 aa7.09□□□□□ -1.27
BRCA1-217ENST00000487825 VIPR1P32241 457 aa7.09□□□□□ -1.27
BRCA1-217ENST00000487825 SLC7A5Q01650 507 aa7.09□□□□□ -1.27
BRCA1-217ENST00000487825 LCE1DQ5T752 114 aa7.09□□□□□ -1.27
BRCA1-217ENST00000487825 HEATR6Q6AI08 1181 aaKnown RBP7.09□□□□□ -1.27
BRCA1-217ENST00000487825 JAMLQ86YT9 394 aa7.09□□□□□ -1.27
BRCA1-217ENST00000487825 C19orf47Q8N9M1 422 aaKnown RBP7.09□□□□□ -1.27
BRCA1-217ENST00000487825 OR6P1Q8NGX9 317 aa7.09□□□□□ -1.27
BRCA1-217ENST00000487825 IRF2BPLQ9H1B7 796 aa7.09□□□□□ -1.27
BRCA1-217ENST00000487825 SIRT5Q9NXA8 310 aa7.09□□□□□ -1.27
BRCA1-217ENST00000487825 METP08581 1390 aa7.08□□□□□ -1.28
BRCA1-217ENST00000487825 MPOP05164 745 aa7.08□□□□□ -1.28
BRCA1-217ENST00000487825 EPHX1P07099 455 aa7.08□□□□□ -1.28
BRCA1-217ENST00000487825 ERVFRD-1P60508 538 aa7.08□□□□□ -1.28
BRCA1-217ENST00000487825 POU4F1Q01851 419 aa7.08□□□□□ -1.28
BRCA1-217ENST00000487825 KRTAP19-4Q3LI73 84 aa7.08□□□□□ -1.28
BRCA1-217ENST00000487825 FBLN7Q53RD9 439 aa7.08□□□□□ -1.28
BRCA1-217ENST00000487825 HLA-DQA1Q5Y7H0 255 aa7.08□□□□□ -1.28
BRCA1-217ENST00000487825 FAM169BQ8N8A8 192 aa7.08□□□□□ -1.28
BRCA1-217ENST00000487825 ANAPC16Q96DE5 110 aa7.08□□□□□ -1.28
BRCA1-217ENST00000487825 SEC16BQ96JE7 1060 aa7.08□□□□□ -1.28
BRCA1-217ENST00000487825 KLHL25Q9H0H3 589 aa7.08□□□□□ -1.28
BRCA1-217ENST00000487825 WHRNQ9P202 907 aa7.08□□□□□ -1.28
BRCA1-217ENST00000487825 MBD1Q9UIS9 605 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-217ENST00000487825 ACSL6Q9UKU0 697 aa7.08□□□□□ -1.28
BRCA1-217ENST00000487825 CNOT6Q9ULM6 557 aaKnown RBP7.08□□□□□ -1.28
BRCA1-217ENST00000487825 PRAG1Q86YV5 1406 aa7.08□□□□□ -1.28
BRCA1-217ENST00000487825 COL14A1Q05707 1796 aaKnown RBP7.08□□□□□ -1.28
BRCA1-217ENST00000487825 DLC1Q96QB1 1528 aa7.07□□□□□ -1.28
BRCA1-217ENST00000487825 A0A087WZG4 1122 aa7.07□□□□□ -1.28
BRCA1-217ENST00000487825 NUDT19A8MXV4 375 aa7.07□□□□□ -1.28
BRCA1-217ENST00000487825 FGF10O15520 208 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-217ENST00000487825 MSL3P1P0C860 447 aa7.07□□□□□ -1.28
BRCA1-217ENST00000487825 LAPTM5Q13571 262 aa7.07□□□□□ -1.28
BRCA1-217ENST00000487825 RAB3GAP1Q15042 981 aa7.07□□□□□ -1.28
BRCA1-217ENST00000487825 KLHL6Q8WZ60 621 aa7.07□□□□□ -1.28
BRCA1-217ENST00000487825 KRTAP4-7Q9BYR0 210 aa7.07□□□□□ -1.28
BRCA1-217ENST00000487825 GBP3Q9H0R5 595 aa7.07□□□□□ -1.28
BRCA1-217ENST00000487825 KLHL14Q9P2G3 628 aa7.07□□□□□ -1.28
BRCA1-217ENST00000487825 DIS3Q9Y2L1 958 aaKnown RBP7.07□□□□□ -1.28
BRCA1-217ENST00000487825 RGPD8O14715 1765 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-217ENST00000487825 SBF2Q86WG5 1849 aa7.06□□□□□ -1.28
BRCA1-217ENST00000487825 VAMP4O75379 141 aa7.06□□□□□ -1.28
BRCA1-217ENST00000487825 EPHB3P54753 998 aa7.06□□□□□ -1.28
BRCA1-217ENST00000487825 YBX1P67809 324 aaKnown RBP7.06□□□□□ -1.28
BRCA1-217ENST00000487825 MVKQ03426 396 aa7.06□□□□□ -1.28
BRCA1-217ENST00000487825 DPY19L1Q2PZI1 675 aa7.06□□□□□ -1.28
BRCA1-217ENST00000487825 KIAA1211LQ6NV74 962 aa7.06□□□□□ -1.28
BRCA1-217ENST00000487825 PTCHD1Q96NR3 888 aa7.06□□□□□ -1.28
BRCA1-217ENST00000487825 MCMBPQ9BTE3 642 aa7.06□□□□□ -1.28
BRCA1-217ENST00000487825 CNTD2Q9H8S5 307 aa7.06□□□□□ -1.28
BRCA1-217ENST00000487825 RRP7BPQ9NSQ0 103 aa7.06□□□□□ -1.28
BRCA1-217ENST00000487825 CCDC9Q9Y3X0 531 aaKnown RBP7.06□□□□□ -1.28
BRCA1-217ENST00000487825 ABCC5O15440 1437 aa7.06□□□□□ -1.28
BRCA1-217ENST00000487825 FMN2Q9NZ56 1722 aa7.06□□□□□ -1.28
BRCA1-217ENST00000487825 CRYBG1Q9Y4K1 1723 aa7.05□□□□□ -1.28
BRCA1-217ENST00000487825 STXBP3O00186 592 aa7.05□□□□□ -1.28
BRCA1-217ENST00000487825 HRKO00198 91 aa7.05□□□□□ -1.28
BRCA1-217ENST00000487825 PPM1BO75688 479 aa7.05□□□□□ -1.28
BRCA1-217ENST00000487825 CASP7P55210 303 aa7.05□□□□□ -1.28
BRCA1-217ENST00000487825 SSPNQ14714 243 aa7.05□□□□□ -1.28
BRCA1-217ENST00000487825 NBPF8Q3BBV2 869 aa7.05□□□□□ -1.28
BRCA1-217ENST00000487825 VHLLQ6RSH7 139 aa7.05□□□□□ -1.28
BRCA1-217ENST00000487825 CYP2R1Q6VVX0 501 aa7.05□□□□□ -1.28
BRCA1-217ENST00000487825 TMC6Q7Z403 805 aa7.05□□□□□ -1.28
BRCA1-217ENST00000487825 SIAH1Q8IUQ4 282 aa7.05□□□□□ -1.28
BRCA1-217ENST00000487825 ZNF428Q96B54 188 aa7.05□□□□□ -1.28
BRCA1-217ENST00000487825 TNFRSF12AQ9NP84 129 aa7.05□□□□□ -1.28
BRCA1-217ENST00000487825 SUGT1Q9Y2Z0 365 aa7.05□□□□□ -1.28
BRCA1-217ENST00000487825 LRPPRCP42704 1394 aaKnown RBP7.05□□□□□ -1.28
BRCA1-217ENST00000487825 A0A1W2PQJ5 194 aa7.04□□□□□ -1.28
BRCA1-217ENST00000487825 ABLIM1O14639 778 aa7.04□□□□□ -1.28
BRCA1-217ENST00000487825 TBC1D8O95759 1140 aa7.04□□□□□ -1.28
BRCA1-217ENST00000487825 TACR1P25103 407 aa7.04□□□□□ -1.28
BRCA1-217ENST00000487825 ERCC5P28715 1186 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-217ENST00000487825 OLFML2BQ68BL8 750 aa7.04□□□□□ -1.28
BRCA1-217ENST00000487825 CGGBP1Q9UFW8 167 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-217ENST00000487825 SUSD2Q9UGT4 822 aa7.04□□□□□ -1.28
BRCA1-217ENST00000487825 KCTD3Q9Y597 815 aa7.04□□□□□ -1.28
BRCA1-217ENST00000487825 IRAK3Q9Y616 596 aa7.04□□□□□ -1.28
BRCA1-217ENST00000487825 MRVI1Q9Y6F6 885 aa7.04□□□□□ -1.28
BRCA1-217ENST00000487825 SPATA31A3Q5VYP0 1347 aa7.03□□□□□ -1.28
BRCA1-217ENST00000487825 CCDC144AA2RUR9 1427 aa7.03□□□□□ -1.28
BRCA1-217ENST00000487825 DAPK1P53355 1430 aa7.03□□□□□ -1.28
BRCA1-217ENST00000487825 ATF4P18848 351 aaPredicted RBP7.03□□□□□ -1.28
BRCA1-217ENST00000487825 PI3P19957 117 aa7.03□□□□□ -1.28
BRCA1-217ENST00000487825 CDR1P51861 262 aa7.03□□□□□ -1.28
BRCA1-217ENST00000487825 RPTNQ6XPR3 784 aa7.03□□□□□ -1.28
BRCA1-217ENST00000487825 AMIGO3Q86WK7 504 aa7.03□□□□□ -1.28
BRCA1-217ENST00000487825 PANK1Q8TE04 598 aa7.03□□□□□ -1.28
BRCA1-217ENST00000487825 SIGLEC10Q96LC7 697 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms