RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 GGPS1O95749 300 aa10.69□□□□□ -0.7
LCN2-205ENST00000487719 CLTBP09497 229 aa10.69□□□□□ -0.7
LCN2-205ENST00000487719 SUPT20HL2P0C7V6 817 aa10.69□□□□□ -0.7
LCN2-205ENST00000487719 TLE2Q04725 743 aa10.69□□□□□ -0.7
LCN2-205ENST00000487719 MTMR1Q13613 665 aa10.69□□□□□ -0.7
LCN2-205ENST00000487719 ITGA7Q13683 1181 aa10.69□□□□□ -0.7
LCN2-205ENST00000487719 TRIM29Q14134 588 aa10.69□□□□□ -0.7
LCN2-205ENST00000487719 FAM47CQ5HY64 1035 aa10.69□□□□□ -0.7
LCN2-205ENST00000487719 CCSAPQ6IQ19 270 aaPredicted RBP10.69□□□□□ -0.7
LCN2-205ENST00000487719 GALNT17Q6IS24 598 aa10.69□□□□□ -0.7
LCN2-205ENST00000487719 CCDC62Q6P9F0 684 aa10.69□□□□□ -0.7
LCN2-205ENST00000487719 IL31RAQ8NI17 732 aa10.69□□□□□ -0.7
LCN2-205ENST00000487719 PPTC7Q8NI37 304 aa10.69□□□□□ -0.7
LCN2-205ENST00000487719 EMID1Q96A84 441 aaPredicted RBP10.69□□□□□ -0.7
LCN2-205ENST00000487719 SPATA33Q96N06 139 aa10.69□□□□□ -0.7
LCN2-205ENST00000487719 LARP6Q9BRS8 491 aaKnown RBP10.69□□□□□ -0.7
LCN2-205ENST00000487719 ANO3Q9BYT9 981 aa10.69□□□□□ -0.7
LCN2-205ENST00000487719 ZMYND12Q9H0C1 365 aa10.69□□□□□ -0.7
LCN2-205ENST00000487719 TMEM39AQ9NV64 488 aa10.69□□□□□ -0.7
LCN2-205ENST00000487719 NOD1Q9Y239 953 aa10.69□□□□□ -0.7
LCN2-205ENST00000487719 GTF3C3Q9Y5Q9 886 aa10.69□□□□□ -0.7
LCN2-205ENST00000487719 ARIH2O95376 493 aa10.68□□□□□ -0.7
LCN2-205ENST00000487719 SEC24BO95487 1268 aa10.68□□□□□ -0.7
LCN2-205ENST00000487719 MMP3P08254 477 aa10.68□□□□□ -0.7
LCN2-205ENST00000487719 RAG1P15918 1043 aa10.68□□□□□ -0.7
LCN2-205ENST00000487719 SYN1P17600 705 aa10.68□□□□□ -0.7
LCN2-205ENST00000487719 UBA1P22314 1058 aaKnown RBP10.68□□□□□ -0.7
LCN2-205ENST00000487719 ICAM3P32942 547 aa10.68□□□□□ -0.7
LCN2-205ENST00000487719 CHMP4BP1P59074 171 aa10.68□□□□□ -0.7
LCN2-205ENST00000487719 PURAQ00577 322 aaKnown RBP10.68□□□□□ -0.7
LCN2-205ENST00000487719 ARHGAP1Q07960 439 aa10.68□□□□□ -0.7
LCN2-205ENST00000487719 RABEP1Q15276 862 aa10.68□□□□□ -0.7
LCN2-205ENST00000487719 NTRK3Q16288 839 aa10.68□□□□□ -0.7
LCN2-205ENST00000487719 CELF3Q5SZQ8 465 aaKnown RBP10.68□□□□□ -0.7
LCN2-205ENST00000487719 METTL7BQ6UX53 244 aa10.68□□□□□ -0.7
LCN2-205ENST00000487719 CHRDL2Q6WN34 429 aa10.68□□□□□ -0.7
LCN2-205ENST00000487719 ANKRD33Q7Z3H0 272 aa10.68□□□□□ -0.7
LCN2-205ENST00000487719 AFG1LQ8WV93 481 aa10.68□□□□□ -0.7
LCN2-205ENST00000487719 COPS5Q92905 334 aa10.68□□□□□ -0.7
LCN2-205ENST00000487719 ZSCAN31Q96LW9 406 aaPredicted RBP10.68□□□□□ -0.7
LCN2-205ENST00000487719 INPP4AQ96PE3 977 aaPredicted RBP10.68□□□□□ -0.7
LCN2-205ENST00000487719 SENP7Q9BQF6 1050 aa10.68□□□□□ -0.7
LCN2-205ENST00000487719 SDF4Q9BRK5 362 aa10.68□□□□□ -0.7
LCN2-205ENST00000487719 RTEL1Q9NZ71 1219 aa10.68□□□□□ -0.7
LCN2-205ENST00000487719 VPS54Q9P1Q0 977 aa10.68□□□□□ -0.7
LCN2-205ENST00000487719 ZNF215Q9UL58 517 aaPredicted RBP10.68□□□□□ -0.7
LCN2-205ENST00000487719 TPCN1Q9ULQ1 816 aa10.68□□□□□ -0.7
LCN2-205ENST00000487719 LIMCH1Q9UPQ0 1083 aa10.68□□□□□ -0.7
LCN2-205ENST00000487719 TANC1Q9C0D5 1861 aa10.68□□□□□ -0.7
LCN2-205ENST00000487719 CTAGE5O15320 804 aa10.67□□□□□ -0.7
LCN2-205ENST00000487719 PPFIA4O75335 1185 aa10.67□□□□□ -0.7
LCN2-205ENST00000487719 SREBF1P36956 1147 aa10.67□□□□□ -0.7
LCN2-205ENST00000487719 RBM25P49756 843 aaKnown RBP10.67□□□□□ -0.7
LCN2-205ENST00000487719 MRPS9P82933 396 aaKnown RBP10.67□□□□□ -0.7
LCN2-205ENST00000487719 SETQ01105 290 aaPredicted RBP10.67□□□□□ -0.7
LCN2-205ENST00000487719 PTPN11Q06124 597 aaPredicted RBP10.67□□□□□ -0.7
LCN2-205ENST00000487719 SCRN1Q12765 414 aa10.67□□□□□ -0.7
LCN2-205ENST00000487719 PKN1Q16512 942 aa10.67□□□□□ -0.7
LCN2-205ENST00000487719 JAKMIP3Q5VZ66 844 aa10.67□□□□□ -0.7
LCN2-205ENST00000487719 NFRKBQ6P4R8 1299 aa10.67□□□□□ -0.7
LCN2-205ENST00000487719 CCDC155Q8N6L0 562 aa10.67□□□□□ -0.7
LCN2-205ENST00000487719 TNPO1Q92973 898 aaKnown RBP10.67□□□□□ -0.7
LCN2-205ENST00000487719 GTF3C6Q969F1 213 aa10.67□□□□□ -0.7
LCN2-205ENST00000487719 SH2B1Q9NRF2 756 aaPredicted RBP10.67□□□□□ -0.7
LCN2-205ENST00000487719 ORC3Q9UBD5 711 aaPredicted RBP10.67□□□□□ -0.7
LCN2-205ENST00000487719 KIF3AQ9Y496 699 aa10.67□□□□□ -0.7
LCN2-205ENST00000487719 EVPLQ92817 2033 aa10.67□□□□□ -0.7
LCN2-205ENST00000487719 MYO9BQ13459 2157 aa10.66□□□□□ -0.7
LCN2-205ENST00000487719 A0A1W2PPC1 479 aa10.66□□□□□ -0.7
LCN2-205ENST00000487719 SPATA31C2B4DYI2 1134 aa10.66□□□□□ -0.7
LCN2-205ENST00000487719 PPFIA3O75145 1194 aa10.66□□□□□ -0.7
LCN2-205ENST00000487719 ARHGAP4P98171 946 aa10.66□□□□□ -0.7
LCN2-205ENST00000487719 CEP55Q53EZ4 464 aa10.66□□□□□ -0.7
LCN2-205ENST00000487719 MYSM1Q5VVJ2 828 aa10.66□□□□□ -0.7
LCN2-205ENST00000487719 TYW1BQ6NUM6 668 aa10.66□□□□□ -0.7
LCN2-205ENST00000487719 CYFIP1Q7L576 1253 aa10.66□□□□□ -0.7
LCN2-205ENST00000487719 C7orf31Q8N865 590 aa10.66□□□□□ -0.7
LCN2-205ENST00000487719 MXRA8Q9BRK3 442 aa10.66□□□□□ -0.7
LCN2-205ENST00000487719 UBE2OQ9C0C9 1292 aaKnown RBP10.66□□□□□ -0.7
LCN2-205ENST00000487719 JADE2Q9NQC1 790 aa10.66□□□□□ -0.7
LCN2-205ENST00000487719 PDLIM7Q9NR12 457 aa10.66□□□□□ -0.7
LCN2-205ENST00000487719 PCDHA4Q9UN74 947 aa10.66□□□□□ -0.7
LCN2-205ENST00000487719 LOXHD1Q8IVV2 1947 aa10.65□□□□□ -0.7
LCN2-205ENST00000487719 CCDC194A0A1B0GVG4 234 aa10.65□□□□□ -0.7
LCN2-205ENST00000487719 SORBS3O60504 671 aa10.65□□□□□ -0.7
LCN2-205ENST00000487719 RGS20O76081 388 aa10.65□□□□□ -0.7
LCN2-205ENST00000487719 MAGEA10P43363 369 aaPredicted RBP10.65□□□□□ -0.7
LCN2-205ENST00000487719 MCM2P49736 904 aa10.65□□□□□ -0.7
LCN2-205ENST00000487719 CLK2P49760 499 aaKnown RBP10.65□□□□□ -0.7
LCN2-205ENST00000487719 PSMC6P62333 389 aa10.65□□□□□ -0.7
LCN2-205ENST00000487719 IRX5P78411 483 aaPredicted RBP10.65□□□□□ -0.7
LCN2-205ENST00000487719 MDM2Q00987 491 aaPredicted RBP10.65□□□□□ -0.7
LCN2-205ENST00000487719 SP4Q02446 784 aa10.65□□□□□ -0.7
LCN2-205ENST00000487719 SAFBQ15424 915 aaKnown RBP eCLIP10.65□□□□□ -0.7
LCN2-205ENST00000487719 ME3Q16798 604 aa10.65□□□□□ -0.7
LCN2-205ENST00000487719 NBPF20Q3BBV1 942 aa10.65□□□□□ -0.7
LCN2-205ENST00000487719 TMEM63BQ5T3F8 832 aa10.65□□□□□ -0.7
LCN2-205ENST00000487719 NIPA1Q7RTP0 329 aa10.65□□□□□ -0.7
LCN2-205ENST00000487719 KRT25Q7Z3Z0 450 aa10.65□□□□□ -0.7
LCN2-205ENST00000487719 FAM126BQ8IXS8 530 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms