RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 RHOBTB3O94955 611 aa10.59□□□□□ -0.71
SF3B1-211ENST00000487698 ITGB5P18084 799 aa10.59□□□□□ -0.71
SF3B1-211ENST00000487698 CCT6AP40227 531 aaKnown RBP10.59□□□□□ -0.71
SF3B1-211ENST00000487698 ZNF75DP51815 510 aa10.59□□□□□ -0.71
SF3B1-211ENST00000487698 PLCB2Q00722 1185 aa10.59□□□□□ -0.71
SF3B1-211ENST00000487698 ZNF658Q5TYW1 1059 aaPredicted RBP10.59□□□□□ -0.71
SF3B1-211ENST00000487698 HAUS3Q68CZ6 603 aa10.59□□□□□ -0.71
SF3B1-211ENST00000487698 MB21D1Q8N884 522 aa10.59□□□□□ -0.71
SF3B1-211ENST00000487698 OPTNQ96CV9 577 aa10.59□□□□□ -0.71
SF3B1-211ENST00000487698 TAAR1Q96RJ0 339 aa10.59□□□□□ -0.71
SF3B1-211ENST00000487698 AGTPBP1Q9UPW5 1226 aa10.59□□□□□ -0.71
SF3B1-211ENST00000487698 UBIAD1Q9Y5Z9 338 aa10.59□□□□□ -0.71
SF3B1-211ENST00000487698 TRPM7Q96QT4 1865 aa10.59□□□□□ -0.71
SF3B1-211ENST00000487698 LRRC37A2A6NM11 1700 aa10.59□□□□□ -0.71
SF3B1-211ENST00000487698 TRAF5O00463 557 aa10.58□□□□□ -0.72
SF3B1-211ENST00000487698 MED24O75448 989 aa10.58□□□□□ -0.72
SF3B1-211ENST00000487698 SPATA31C1P0DKV0 1188 aa10.58□□□□□ -0.72
SF3B1-211ENST00000487698 GJA5P36382 358 aa10.58□□□□□ -0.72
SF3B1-211ENST00000487698 MRPS9P82933 396 aaKnown RBP10.58□□□□□ -0.72
SF3B1-211ENST00000487698 AMPD3Q01432 767 aa10.58□□□□□ -0.72
SF3B1-211ENST00000487698 PPP2R5CQ13362 524 aa10.58□□□□□ -0.72
SF3B1-211ENST00000487698 BAATQ14032 418 aaPredicted RBP10.58□□□□□ -0.72
SF3B1-211ENST00000487698 MCM6Q14566 821 aa10.58□□□□□ -0.72
SF3B1-211ENST00000487698 PGM5Q15124 567 aa10.58□□□□□ -0.72
SF3B1-211ENST00000487698 HS1BP3Q53T59 392 aa10.58□□□□□ -0.72
SF3B1-211ENST00000487698 B3GNT9Q6UX72 402 aa10.58□□□□□ -0.72
SF3B1-211ENST00000487698 NSMFQ6X4W1 530 aa10.58□□□□□ -0.72
SF3B1-211ENST00000487698 GADL1Q6ZQY3 521 aa10.58□□□□□ -0.72
SF3B1-211ENST00000487698 SV2BQ7L1I2 683 aa10.58□□□□□ -0.72
SF3B1-211ENST00000487698 SMYD4Q8IYR2 804 aaPredicted RBP10.58□□□□□ -0.72
SF3B1-211ENST00000487698 ENOX1Q8TC92 643 aaKnown RBP10.58□□□□□ -0.72
SF3B1-211ENST00000487698 PDCD2LQ9BRP1 358 aa10.58□□□□□ -0.72
SF3B1-211ENST00000487698 ACAD9Q9H845 621 aa10.58□□□□□ -0.72
SF3B1-211ENST00000487698 PXMP2Q9NR77 195 aa10.58□□□□□ -0.72
SF3B1-211ENST00000487698 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.58□□□□□ -0.72
SF3B1-211ENST00000487698 CLEC11AQ9Y240 323 aa10.58□□□□□ -0.72
SF3B1-211ENST00000487698 STK24Q9Y6E0 443 aa10.58□□□□□ -0.72
SF3B1-211ENST00000487698 POTEB3A0JP26 581 aa10.58□□□□□ -0.72
SF3B1-211ENST00000487698 MYMKA6NI61 221 aa10.58□□□□□ -0.72
SF3B1-211ENST00000487698 ARP10275 920 aa10.58□□□□□ -0.72
SF3B1-211ENST00000487698 RPA1P27694 616 aa10.58□□□□□ -0.72
SF3B1-211ENST00000487698 CDC25BP30305 580 aa10.58□□□□□ -0.72
SF3B1-211ENST00000487698 KMT5BQ4FZB7 885 aa10.58□□□□□ -0.72
SF3B1-211ENST00000487698 LRCH2Q5VUJ6 765 aa10.58□□□□□ -0.72
SF3B1-211ENST00000487698 NCAPH2Q6IBW4 605 aa10.58□□□□□ -0.72
SF3B1-211ENST00000487698 POTEBQ6S5H4 581 aa10.58□□□□□ -0.72
SF3B1-211ENST00000487698 OTOP1Q7RTM1 612 aa10.58□□□□□ -0.72
SF3B1-211ENST00000487698 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.58□□□□□ -0.72
SF3B1-211ENST00000487698 CATSPER3Q86XQ3 398 aa10.58□□□□□ -0.72
SF3B1-211ENST00000487698 ERMNQ8TAM6 284 aa10.58□□□□□ -0.72
SF3B1-211ENST00000487698 MRFAP1L1Q96HT8 127 aa10.58□□□□□ -0.72
SF3B1-211ENST00000487698 RMDN3Q96TC7 470 aa10.58□□□□□ -0.72
SF3B1-211ENST00000487698 TRIM5Q9C035 493 aa10.58□□□□□ -0.72
SF3B1-211ENST00000487698 A1CFQ9NQ94 594 aaKnown RBP10.58□□□□□ -0.72
SF3B1-211ENST00000487698 CYP39A1Q9NYL5 469 aa10.58□□□□□ -0.72
SF3B1-211ENST00000487698 BTBD7Q9P203 1132 aa10.58□□□□□ -0.72
SF3B1-211ENST00000487698 EML1O00423 815 aa10.57□□□□□ -0.72
SF3B1-211ENST00000487698 EIF2AK2P19525 551 aaKnown RBP10.57□□□□□ -0.72
SF3B1-211ENST00000487698 TPM4P67936 248 aa10.57□□□□□ -0.72
SF3B1-211ENST00000487698 GIMAP8Q8ND71 665 aaPredicted RBP10.57□□□□□ -0.72
SF3B1-211ENST00000487698 CHST13Q8NET6 341 aa10.57□□□□□ -0.72
SF3B1-211ENST00000487698 TRIM44Q96DX7 344 aaPredicted RBP10.57□□□□□ -0.72
SF3B1-211ENST00000487698 ZFP91Q96JP5 570 aaPredicted RBP10.57□□□□□ -0.72
SF3B1-211ENST00000487698 PURBQ96QR8 312 aaKnown RBP10.57□□□□□ -0.72
SF3B1-211ENST00000487698 RIT2Q99578 217 aa10.57□□□□□ -0.72
SF3B1-211ENST00000487698 ZNF577Q9BSK1 485 aa10.57□□□□□ -0.72
SF3B1-211ENST00000487698 POLR3CQ9BUI4 534 aaPredicted RBP10.57□□□□□ -0.72
SF3B1-211ENST00000487698 ASCC2Q9H1I8 757 aaPredicted RBP10.57□□□□□ -0.72
SF3B1-211ENST00000487698 KCNH7Q9NS40 1196 aa10.57□□□□□ -0.72
SF3B1-211ENST00000487698 KIAA1024Q9UPX6 916 aa10.57□□□□□ -0.72
SF3B1-211ENST00000487698 GDAQ9Y2T3 454 aa10.57□□□□□ -0.72
SF3B1-211ENST00000487698 DOCK5Q9H7D0 1870 aa10.57□□□□□ -0.72
SF3B1-211ENST00000487698 POTEFA5A3E0 1075 aa10.57□□□□□ -0.72
SF3B1-211ENST00000487698 IPO5O00410 1097 aaKnown RBP10.57□□□□□ -0.72
SF3B1-211ENST00000487698 ZNF18P17022 549 aa10.57□□□□□ -0.72
SF3B1-211ENST00000487698 HERVK_113P62684 666 aa10.57□□□□□ -0.72
SF3B1-211ENST00000487698 FKBP1BP68106 108 aa10.57□□□□□ -0.72
SF3B1-211ENST00000487698 IRX3P78415 501 aaPredicted RBP10.57□□□□□ -0.72
SF3B1-211ENST00000487698 XRRA1Q6P2D8 792 aa10.57□□□□□ -0.72
SF3B1-211ENST00000487698 POTEGQ6S5H5 508 aa10.57□□□□□ -0.72
SF3B1-211ENST00000487698 RIOX2Q8IUF8 465 aa10.57□□□□□ -0.72
SF3B1-211ENST00000487698 TRMT44Q8IYL2 757 aaKnown RBP10.57□□□□□ -0.72
SF3B1-211ENST00000487698 KCTD17Q8N5Z5 321 aa10.57□□□□□ -0.72
SF3B1-211ENST00000487698 WDR11Q9BZH6 1224 aa10.57□□□□□ -0.72
SF3B1-211ENST00000487698 LRRC27Q9C0I9 530 aa10.57□□□□□ -0.72
SF3B1-211ENST00000487698 RRAGCQ9HB90 399 aa10.57□□□□□ -0.72
SF3B1-211ENST00000487698 JADE2Q9NQC1 790 aa10.57□□□□□ -0.72
SF3B1-211ENST00000487698 FANCLQ9NW38 375 aa10.57□□□□□ -0.72
SF3B1-211ENST00000487698 SYNRGQ9UMZ2 1314 aa10.57□□□□□ -0.72
SF3B1-211ENST00000487698 PVALEFA0A1B0GWK0 134 aa10.56□□□□□ -0.72
SF3B1-211ENST00000487698 E9PMD0 336 aa10.56□□□□□ -0.72
SF3B1-211ENST00000487698 DHX15O43143 795 aaKnown RBP10.56□□□□□ -0.72
SF3B1-211ENST00000487698 GAS7O60861 476 aa10.56□□□□□ -0.72
SF3B1-211ENST00000487698 CNMDO75829 334 aa10.56□□□□□ -0.72
SF3B1-211ENST00000487698 ATP1A3P13637 1013 aa10.56□□□□□ -0.72
SF3B1-211ENST00000487698 ASIC1P78348 528 aa10.56□□□□□ -0.72
SF3B1-211ENST00000487698 EHHADHQ08426 723 aa10.56□□□□□ -0.72
SF3B1-211ENST00000487698 PLS1Q14651 629 aa10.56□□□□□ -0.72
SF3B1-211ENST00000487698 COBLL1Q53SF7 1204 aa10.56□□□□□ -0.72
SF3B1-211ENST00000487698 GPAT2Q6NUI2 795 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms