RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 CCDC17Q96LX7 622 aa13.67□□□□□ -0.22
PTCD2-204ENST00000486995 UIMC1Q96RL1 719 aa13.67□□□□□ -0.22
PTCD2-204ENST00000486995 TSG101Q99816 390 aa13.67□□□□□ -0.22
PTCD2-204ENST00000486995 FGFBP2Q9BYJ0 223 aa13.67□□□□□ -0.22
PTCD2-204ENST00000486995 PCDHA2Q9Y5H9 948 aa13.67□□□□□ -0.22
PTCD2-204ENST00000486995 PDE2AO00408 941 aaPredicted RBP13.67□□□□□ -0.22
PTCD2-204ENST00000486995 KIF11P52732 1056 aa13.67□□□□□ -0.22
PTCD2-204ENST00000486995 GYS2P54840 703 aa13.67□□□□□ -0.22
PTCD2-204ENST00000486995 KCNMA1Q12791 1236 aa13.67□□□□□ -0.22
PTCD2-204ENST00000486995 CASP8Q14790 479 aa13.67□□□□□ -0.22
PTCD2-204ENST00000486995 SMCR8Q8TEV9 937 aaPredicted RBP13.67□□□□□ -0.22
PTCD2-204ENST00000486995 MKL1Q969V6 931 aa13.67□□□□□ -0.22
PTCD2-204ENST00000486995 RPGRIP1Q96KN7 1286 aa13.67□□□□□ -0.22
PTCD2-204ENST00000486995 IFIH1Q9BYX4 1025 aaKnown RBP13.67□□□□□ -0.22
PTCD2-204ENST00000486995 NT5C3AQ9H0P0 336 aa13.67□□□□□ -0.22
PTCD2-204ENST00000486995 KCNQ5Q9NR82 932 aa13.67□□□□□ -0.22
PTCD2-204ENST00000486995 TRPC5Q9UL62 973 aaPredicted RBP13.67□□□□□ -0.22
PTCD2-204ENST00000486995 KIAA1024Q9UPX6 916 aa13.67□□□□□ -0.22
PTCD2-204ENST00000486995 GREB1LQ9C091 1923 aaPredicted RBP13.67□□□□□ -0.22
PTCD2-204ENST00000486995 NPR1P16066 1061 aa13.66□□□□□ -0.22
PTCD2-204ENST00000486995 CRKP46108 304 aa13.66□□□□□ -0.22
PTCD2-204ENST00000486995 FKBP3Q00688 224 aaKnown RBP13.66□□□□□ -0.22
PTCD2-204ENST00000486995 FAM26FQ5R3K3 315 aa13.66□□□□□ -0.22
PTCD2-204ENST00000486995 SH2D4AQ9H788 454 aa13.66□□□□□ -0.22
PTCD2-204ENST00000486995 KCNMB3Q9NPA1 279 aa13.66□□□□□ -0.22
PTCD2-204ENST00000486995 PCDHA1Q9Y5I3 950 aa13.66□□□□□ -0.22
PTCD2-204ENST00000486995 COL4A3BPQ9Y5P4 624 aa13.66□□□□□ -0.22
PTCD2-204ENST00000486995 MYH7BA7E2Y1 1941 aa13.66□□□□□ -0.22
PTCD2-204ENST00000486995 ADAMTSL1Q8N6G6 1762 aa13.66□□□□□ -0.22
PTCD2-204ENST00000486995 FAM196BA6NMK8 535 aa13.66□□□□□ -0.22
PTCD2-204ENST00000486995 USO1O60763 962 aaKnown RBP13.66□□□□□ -0.22
PTCD2-204ENST00000486995 TRIM37O94972 964 aa13.66□□□□□ -0.22
PTCD2-204ENST00000486995 SSBP05455 408 aaKnown RBP eCLIP13.66□□□□□ -0.22
PTCD2-204ENST00000486995 EEF2P13639 858 aaKnown RBP13.66□□□□□ -0.22
PTCD2-204ENST00000486995 USP11P51784 963 aa13.66□□□□□ -0.22
PTCD2-204ENST00000486995 CACNB3P54284 484 aa13.66□□□□□ -0.22
PTCD2-204ENST00000486995 CKAP4Q07065 602 aaKnown RBP13.66□□□□□ -0.22
PTCD2-204ENST00000486995 ASTE1Q2TB18 679 aaPredicted RBP13.66□□□□□ -0.22
PTCD2-204ENST00000486995 NAP1L4Q99733 375 aaKnown RBP13.66□□□□□ -0.22
PTCD2-204ENST00000486995 JADE2Q9NQC1 790 aa13.66□□□□□ -0.22
PTCD2-204ENST00000486995 BMP2KQ9NSY1 1161 aaPredicted RBP13.66□□□□□ -0.22
PTCD2-204ENST00000486995 RNF216Q9NWF9 866 aaPredicted RBP13.66□□□□□ -0.22
PTCD2-204ENST00000486995 TBC1D7Q9P0N9 293 aa13.66□□□□□ -0.22
PTCD2-204ENST00000486995 ADAM21Q9UKJ8 722 aa13.66□□□□□ -0.22
PTCD2-204ENST00000486995 PCDHAC2Q9Y5I4 1007 aa13.66□□□□□ -0.22
PTCD2-204ENST00000486995 CAPN6Q9Y6Q1 641 aa13.66□□□□□ -0.22
PTCD2-204ENST00000486995 KDM3AQ9Y4C1 1321 aa13.66□□□□□ -0.22
PTCD2-204ENST00000486995 ANKRD31Q8N7Z5 1873 aa13.65□□□□□ -0.22
PTCD2-204ENST00000486995 CYP3A7-CYP3A51PA0A087WV96 503 aa13.65□□□□□ -0.22
PTCD2-204ENST00000486995 LRRIQ3A6PVS8 624 aaPredicted RBP13.65□□□□□ -0.22
PTCD2-204ENST00000486995 TRAF5O00463 557 aa13.65□□□□□ -0.22
PTCD2-204ENST00000486995 N4BP1O75113 896 aaKnown RBP13.65□□□□□ -0.22
PTCD2-204ENST00000486995 PLA2G4BP0C869 781 aa13.65□□□□□ -0.22
PTCD2-204ENST00000486995 CYP3A7P24462 503 aa13.65□□□□□ -0.22
PTCD2-204ENST00000486995 SLC1A4P43007 532 aa13.65□□□□□ -0.22
PTCD2-204ENST00000486995 PDXDC1Q6P996 788 aa13.65□□□□□ -0.22
PTCD2-204ENST00000486995 SIAH1Q8IUQ4 282 aa13.65□□□□□ -0.22
PTCD2-204ENST00000486995 GPIHBP1Q8IV16 184 aa13.65□□□□□ -0.22
PTCD2-204ENST00000486995 TRIM58Q8NG06 486 aa13.65□□□□□ -0.22
PTCD2-204ENST00000486995 ZDHHC15Q96MV8 337 aa13.65□□□□□ -0.22
PTCD2-204ENST00000486995 EDEM3Q9BZQ6 932 aa13.65□□□□□ -0.22
PTCD2-204ENST00000486995 GLT8D2Q9H1C3 349 aa13.65□□□□□ -0.22
PTCD2-204ENST00000486995 MLXIPQ9HAP2 919 aa13.65□□□□□ -0.22
PTCD2-204ENST00000486995 JRKLQ9Y4A0 524 aa13.65□□□□□ -0.22
PTCD2-204ENST00000486995 NPHP3-ACAD11A0A0J9YXS1 232 aa13.65□□□□□ -0.22
PTCD2-204ENST00000486995 POTEB3A0JP26 581 aa13.65□□□□□ -0.22
PTCD2-204ENST00000486995 CCDC66A2RUB6 948 aa13.65□□□□□ -0.22
PTCD2-204ENST00000486995 DDTLA6NHG4 134 aaPredicted RBP13.65□□□□□ -0.22
PTCD2-204ENST00000486995 POTECB2RU33 542 aa13.65□□□□□ -0.22
PTCD2-204ENST00000486995 ALDH1B1P30837 517 aa13.65□□□□□ -0.22
PTCD2-204ENST00000486995 GPS2Q13227 327 aa13.65□□□□□ -0.22
PTCD2-204ENST00000486995 POTEBQ6S5H4 581 aa13.65□□□□□ -0.22
PTCD2-204ENST00000486995 NEK11Q8NG66 645 aa13.65□□□□□ -0.22
PTCD2-204ENST00000486995 ZBTB9Q96C00 473 aa13.65□□□□□ -0.22
PTCD2-204ENST00000486995 MBOAT7Q96N66 472 aa13.65□□□□□ -0.22
PTCD2-204ENST00000486995 ANO3Q9BYT9 981 aa13.65□□□□□ -0.22
PTCD2-204ENST00000486995 TANGO6Q9C0B7 1094 aa13.65□□□□□ -0.22
PTCD2-204ENST00000486995 DEF6Q9H4E7 631 aa13.65□□□□□ -0.22
PTCD2-204ENST00000486995 NYAP2Q9P242 653 aa13.65□□□□□ -0.22
PTCD2-204ENST00000486995 TARSL2A2RTX5 802 aaKnown RBP13.64□□□□□ -0.23
PTCD2-204ENST00000486995 G3V3G9 751 aa13.64□□□□□ -0.23
PTCD2-204ENST00000486995 MEIS2O14770 477 aa13.64□□□□□ -0.23
PTCD2-204ENST00000486995 RAD21O60216 631 aa13.64□□□□□ -0.23
PTCD2-204ENST00000486995 AKR1B10O60218 316 aa13.64□□□□□ -0.23
PTCD2-204ENST00000486995 EIF3JO75822 258 aaKnown RBP13.64□□□□□ -0.23
PTCD2-204ENST00000486995 CACNB1Q02641 598 aaPredicted RBP13.64□□□□□ -0.23
PTCD2-204ENST00000486995 TCP10Q12799 353 aa13.64□□□□□ -0.23
PTCD2-204ENST00000486995 CDC37Q16543 378 aaPredicted RBP13.64□□□□□ -0.23
PTCD2-204ENST00000486995 DCAF8Q5TAQ9 597 aa13.64□□□□□ -0.23
PTCD2-204ENST00000486995 HGSNATQ68CP4 663 aa13.64□□□□□ -0.23
PTCD2-204ENST00000486995 SLFN13Q68D06 897 aa13.64□□□□□ -0.23
PTCD2-204ENST00000486995 CREG2Q8IUH2 290 aa13.64□□□□□ -0.23
PTCD2-204ENST00000486995 DCAF4Q8WV16 495 aa13.64□□□□□ -0.23
PTCD2-204ENST00000486995 CRYGNQ8WXF5 182 aa13.64□□□□□ -0.23
PTCD2-204ENST00000486995 P2RX7Q99572 595 aaKnown RBP13.64□□□□□ -0.23
PTCD2-204ENST00000486995 SNX12Q9UMY4 172 aa13.64□□□□□ -0.23
PTCD2-204ENST00000486995 MYH4Q9Y623 1939 aa13.64□□□□□ -0.23
PTCD2-204ENST00000486995 TACC1O75410 805 aa13.64□□□□□ -0.23
PTCD2-204ENST00000486995 MED24O75448 989 aa13.64□□□□□ -0.23
PTCD2-204ENST00000486995 NOL4O94818 638 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms