RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-223ENST00000486991 RGS22Q8NE09 1264 aa15.04■□□□□ -0
NR1H3-223ENST00000486991 NSUN7Q8NE18 718 aaKnown RBP15.04■□□□□ -0
NR1H3-223ENST00000486991 TBC1D5Q92609 795 aa15.04■□□□□ -0
NR1H3-223ENST00000486991 LLPHQ9BRT6 129 aaKnown RBP15.04■□□□□ -0
NR1H3-223ENST00000486991 SPZ1Q9BXG8 430 aa15.04■□□□□ -0
NR1H3-223ENST00000486991 SLC26A6Q9BXS9 759 aa15.04■□□□□ -0
NR1H3-223ENST00000486991 MAF1Q9H063 256 aa15.04■□□□□ -0
NR1H3-223ENST00000486991 RIOX1Q9H6W3 641 aa15.04■□□□□ -0
NR1H3-223ENST00000486991 IL23AQ9NPF7 189 aa15.04■□□□□ -0
NR1H3-223ENST00000486991 COL20A1Q9P218 1284 aa15.04■□□□□ -0
NR1H3-223ENST00000486991 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.04■□□□□ -0
NR1H3-223ENST00000486991 MYH7BA7E2Y1 1941 aa15.04■□□□□ -0
NR1H3-223ENST00000486991 ABCB11O95342 1321 aa15.03■□□□□ -0
NR1H3-223ENST00000486991 hCG_1642624A0A1W2PR95 340 aa15.03■□□□□ -0
NR1H3-223ENST00000486991 PTPDC1A2A3K4 754 aa15.03■□□□□ -0
NR1H3-223ENST00000486991 B4DLN1 442 aa15.03■□□□□ -0
NR1H3-223ENST00000486991 SMARCA1P28370 1054 aa15.03■□□□□ -0
NR1H3-223ENST00000486991 MRPL12P52815 198 aaKnown RBP15.03■□□□□ -0
NR1H3-223ENST00000486991 GHRHRQ02643 423 aa15.03■□□□□ -0
NR1H3-223ENST00000486991 FUT2Q10981 343 aa15.03■□□□□ -0
NR1H3-223ENST00000486991 CCDC85BQ15834 202 aaPredicted RBP15.03■□□□□ -0
NR1H3-223ENST00000486991 OTOP2Q7RTS6 562 aa15.03■□□□□ -0
NR1H3-223ENST00000486991 HOMER1Q86YM7 354 aa15.03■□□□□ -0
NR1H3-223ENST00000486991 TRIM22Q8IYM9 498 aa15.03■□□□□ -0
NR1H3-223ENST00000486991 RRP36Q96EU6 259 aaKnown RBP15.03■□□□□ -0
NR1H3-223ENST00000486991 AP5M1Q9H0R1 490 aa15.03■□□□□ -0
NR1H3-223ENST00000486991 NKX2-4Q9H2Z4 354 aa15.03■□□□□ -0
NR1H3-223ENST00000486991 HIPK3Q9H422 1215 aa15.03■□□□□ -0
NR1H3-223ENST00000486991 SMC3Q9UQE7 1217 aa15.03■□□□□ -0
NR1H3-223ENST00000486991 YBX2Q9Y2T7 364 aaKnown RBP15.03■□□□□ -0
NR1H3-223ENST00000486991 GBF1Q92538 1859 aa15.03■□□□□ -0
NR1H3-223ENST00000486991 B4GALT4O60513 344 aa15.02■□□□□ -0
NR1H3-223ENST00000486991 CALML3P27482 149 aa15.02■□□□□ -0
NR1H3-223ENST00000486991 RABGGTBP53611 331 aa15.02■□□□□ -0
NR1H3-223ENST00000486991 FBXO11Q86XK2 927 aa15.02■□□□□ -0
NR1H3-223ENST00000486991 SYTL5Q8TDW5 730 aaPredicted RBP15.02■□□□□ -0
NR1H3-223ENST00000486991 VWCEQ96DN2 955 aa15.02■□□□□ -0
NR1H3-223ENST00000486991 SCLYQ96I15 445 aa15.02■□□□□ -0
NR1H3-223ENST00000486991 PIGSQ96S52 555 aa15.02■□□□□ -0
NR1H3-223ENST00000486991 RNF26Q9BY78 433 aaPredicted RBP15.02■□□□□ -0
NR1H3-223ENST00000486991 WNT8AQ9H1J5 351 aa15.02■□□□□ -0
NR1H3-223ENST00000486991 VTA1Q9NP79 307 aa15.02■□□□□ -0
NR1H3-223ENST00000486991 ORC3Q9UBD5 711 aaPredicted RBP15.02■□□□□ -0
NR1H3-223ENST00000486991 SEC63Q9UGP8 760 aaKnown RBP15.02■□□□□ -0
NR1H3-223ENST00000486991 V9GY48 417 aaPredicted RBP15.02■□□□□ -0
NR1H3-223ENST00000486991 RBM47A0AV96 593 aaKnown RBP15.01□□□□□ -0.01
NR1H3-223ENST00000486991 ZBTB5O15062 677 aa15.01□□□□□ -0.01
NR1H3-223ENST00000486991 PRPF3O43395 683 aaKnown RBP15.01□□□□□ -0.01
NR1H3-223ENST00000486991 FGBP02675 491 aa15.01□□□□□ -0.01
NR1H3-223ENST00000486991 MYOGP15173 224 aa15.01□□□□□ -0.01
NR1H3-223ENST00000486991 IQSEC1Q6DN90 963 aa15.01□□□□□ -0.01
NR1H3-223ENST00000486991 PSRC1Q6PGN9 363 aaPredicted RBP15.01□□□□□ -0.01
NR1H3-223ENST00000486991 DNERQ8NFT8 737 aa15.01□□□□□ -0.01
NR1H3-223ENST00000486991 SMARCC2Q8TAQ2 1214 aa15.01□□□□□ -0.01
NR1H3-223ENST00000486991 HERVK_113Q902F9 699 aa15.01□□□□□ -0.01
NR1H3-223ENST00000486991 INTS4Q96HW7 963 aaKnown RBP15.01□□□□□ -0.01
NR1H3-223ENST00000486991 NOC4LQ9BVI4 516 aaKnown RBP15.01□□□□□ -0.01
NR1H3-223ENST00000486991 DOCK5Q9H7D0 1870 aa15.01□□□□□ -0.01
NR1H3-223ENST00000486991 STK36Q9NRP7 1315 aa15□□□□□ -0.01
NR1H3-223ENST00000486991 ZEB2O60315 1214 aa15□□□□□ -0.01
NR1H3-223ENST00000486991 CYP2C9P11712 490 aa15□□□□□ -0.01
NR1H3-223ENST00000486991 IGFBP4P22692 258 aa15□□□□□ -0.01
NR1H3-223ENST00000486991 GJB2P29033 226 aa15□□□□□ -0.01
NR1H3-223ENST00000486991 HSD17B4P51659 736 aa15□□□□□ -0.01
NR1H3-223ENST00000486991 HMGN5P82970 282 aaKnown RBP15□□□□□ -0.01
NR1H3-223ENST00000486991 TRAF1Q13077 416 aa15□□□□□ -0.01
NR1H3-223ENST00000486991 FAM184AQ8NB25 1140 aa15□□□□□ -0.01
NR1H3-223ENST00000486991 GAS2L1Q99501 681 aaPredicted RBP15□□□□□ -0.01
NR1H3-223ENST00000486991 TRMT13Q9NUP7 481 aaKnown RBP15□□□□□ -0.01
NR1H3-223ENST00000486991 Q9Y3F1 56 aa15□□□□□ -0.01
NR1H3-223ENST00000486991 TTC28Q96AY4 2481 aa15□□□□□ -0.01
NR1H3-223ENST00000486991 MUC3AQ02505 3323 aa14.99□□□□□ -0.01
NR1H3-223ENST00000486991 PNMA6FA0A0J9YX94 578 aa14.99□□□□□ -0.01
NR1H3-223ENST00000486991 CABYRO75952 493 aa14.99□□□□□ -0.01
NR1H3-223ENST00000486991 DEXIO95424 95 aa14.99□□□□□ -0.01
NR1H3-223ENST00000486991 FDPSP14324 419 aaKnown RBP14.99□□□□□ -0.01
NR1H3-223ENST00000486991 FOSBP53539 338 aa14.99□□□□□ -0.01
NR1H3-223ENST00000486991 TJAP1Q5JTD0 557 aa14.99□□□□□ -0.01
NR1H3-223ENST00000486991 MCF2L2Q86YR7 1114 aa14.99□□□□□ -0.01
NR1H3-223ENST00000486991 TAAR1Q96RJ0 339 aa14.99□□□□□ -0.01
NR1H3-223ENST00000486991 AMNQ9BXJ7 453 aa14.99□□□□□ -0.01
NR1H3-223ENST00000486991 MSRAQ9UJ68 235 aa14.99□□□□□ -0.01
NR1H3-223ENST00000486991 MRPL11Q9Y3B7 192 aaKnown RBP14.99□□□□□ -0.01
NR1H3-223ENST00000486991 TRANK1O15050 2925 aa14.98□□□□□ -0.01
NR1H3-223ENST00000486991 MYL3P08590 195 aa14.98□□□□□ -0.01
NR1H3-223ENST00000486991 SCG2P13521 617 aa14.98□□□□□ -0.01
NR1H3-223ENST00000486991 PKN1Q16512 942 aa14.98□□□□□ -0.01
NR1H3-223ENST00000486991 DUSP28Q4G0W2 176 aa14.98□□□□□ -0.01
NR1H3-223ENST00000486991 HEATR3Q7Z4Q2 680 aa14.98□□□□□ -0.01
NR1H3-223ENST00000486991 WASF1Q92558 559 aa14.98□□□□□ -0.01
NR1H3-223ENST00000486991 COPS5Q92905 334 aa14.98□□□□□ -0.01
NR1H3-223ENST00000486991 GPKOWQ92917 476 aaPredicted RBP eCLIP14.98□□□□□ -0.01
NR1H3-223ENST00000486991 AIFM3Q96NN9 605 aa14.98□□□□□ -0.01
NR1H3-223ENST00000486991 IPO9Q96P70 1041 aaKnown RBP14.98□□□□□ -0.01
NR1H3-223ENST00000486991 ALG1Q9BT22 464 aa14.98□□□□□ -0.01
NR1H3-223ENST00000486991 SEZ6LQ9BYH1 1024 aa14.98□□□□□ -0.01
NR1H3-223ENST00000486991 WDR11Q9BZH6 1224 aa14.98□□□□□ -0.01
NR1H3-223ENST00000486991 KIF3AQ9Y496 699 aa14.98□□□□□ -0.01
NR1H3-223ENST00000486991 PCDHA1Q9Y5I3 950 aa14.98□□□□□ -0.01
NR1H3-223ENST00000486991 MYO9BQ13459 2157 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms