RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 MEFVO15553 781 aaPredicted RBP13.64□□□□□ -0.23
HSPG2-211ENST00000486901 CTNNA1P35221 906 aaKnown RBP13.64□□□□□ -0.23
HSPG2-211ENST00000486901 TRAPPC10P48553 1259 aa13.64□□□□□ -0.23
HSPG2-211ENST00000486901 ECM1Q16610 540 aa13.64□□□□□ -0.23
HSPG2-211ENST00000486901 FAM83BQ5T0W9 1011 aa13.64□□□□□ -0.23
HSPG2-211ENST00000486901 FAM114A1Q8IWE2 563 aa13.64□□□□□ -0.23
HSPG2-211ENST00000486901 PURBQ96QR8 312 aaKnown RBP13.64□□□□□ -0.23
HSPG2-211ENST00000486901 TSGA10Q9BZW7 698 aa13.64□□□□□ -0.23
HSPG2-211ENST00000486901 CCDC113Q9H0I3 377 aa13.64□□□□□ -0.23
HSPG2-211ENST00000486901 UTRNP46939 3433 aa13.64□□□□□ -0.23
HSPG2-211ENST00000486901 GLI3P10071 1580 aa13.64□□□□□ -0.23
HSPG2-211ENST00000486901 KLHL30Q0D2K2 578 aa13.63□□□□□ -0.23
HSPG2-211ENST00000486901 MYCBPAPQ8TBZ2 947 aa13.63□□□□□ -0.23
HSPG2-211ENST00000486901 PIK3R5Q8WYR1 880 aa13.63□□□□□ -0.23
HSPG2-211ENST00000486901 HAUS2Q9NVX0 235 aa13.63□□□□□ -0.23
HSPG2-211ENST00000486901 ANAPC4Q9UJX5 808 aa13.63□□□□□ -0.23
HSPG2-211ENST00000486901 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.63□□□□□ -0.233e-10■■□□□ 13.9
HSPG2-211ENST00000486901 E9PMD0 336 aa13.63□□□□□ -0.23
HSPG2-211ENST00000486901 PPP1R37O75864 691 aa13.63□□□□□ -0.23
HSPG2-211ENST00000486901 CDC25CP30307 473 aa13.63□□□□□ -0.23
HSPG2-211ENST00000486901 SLC16A2P36021 539 aa13.63□□□□□ -0.23
HSPG2-211ENST00000486901 ERVK-9P63128 1117 aa13.63□□□□□ -0.23
HSPG2-211ENST00000486901 DHX9Q08211 1270 aaKnown RBP13.63□□□□□ -0.23
HSPG2-211ENST00000486901 ITPK1Q13572 414 aa13.63□□□□□ -0.23
HSPG2-211ENST00000486901 KCNB1Q14721 858 aa13.63□□□□□ -0.23
HSPG2-211ENST00000486901 NONOQ15233 471 aaKnown RBP eCLIP13.63□□□□□ -0.23
HSPG2-211ENST00000486901 DCAF17Q5H9S7 520 aaPredicted RBP13.63□□□□□ -0.23
HSPG2-211ENST00000486901 BAP1Q92560 729 aa13.63□□□□□ -0.23
HSPG2-211ENST00000486901 SEPT11Q9NVA2 429 aaKnown RBP13.63□□□□□ -0.23
HSPG2-211ENST00000486901 GOLGA6L10A6NI86 522 aa13.63□□□□□ -0.23
HSPG2-211ENST00000486901 DAPK3O43293 454 aa13.63□□□□□ -0.23
HSPG2-211ENST00000486901 KCNQ2O43526 872 aa13.63□□□□□ -0.23
HSPG2-211ENST00000486901 BUB1BO60566 1050 aaPredicted RBP13.63□□□□□ -0.23
HSPG2-211ENST00000486901 GRB10Q13322 594 aa13.63□□□□□ -0.23
HSPG2-211ENST00000486901 PPP2R5BQ15173 497 aa13.63□□□□□ -0.23
HSPG2-211ENST00000486901 SFMBT2Q5VUG0 894 aa13.63□□□□□ -0.23
HSPG2-211ENST00000486901 CNNM4Q6P4Q7 775 aa13.63□□□□□ -0.23
HSPG2-211ENST00000486901 GBP6Q6ZN66 633 aa13.63□□□□□ -0.23
HSPG2-211ENST00000486901 MSL3Q8N5Y2 521 aaKnown RBP13.63□□□□□ -0.23
HSPG2-211ENST00000486901 BRIP1Q9BX63 1249 aa13.63□□□□□ -0.23
HSPG2-211ENST00000486901 CXorf56Q9H5V9 222 aa13.63□□□□□ -0.23
HSPG2-211ENST00000486901 BLOC1S4Q9NUP1 217 aa13.63□□□□□ -0.23
HSPG2-211ENST00000486901 SPEF2Q9C093 1822 aa13.63□□□□□ -0.23
HSPG2-211ENST00000486901 TAF1P21675 1872 aa13.62□□□□□ -0.23
HSPG2-211ENST00000486901 MEIS1O00470 390 aa13.62□□□□□ -0.23
HSPG2-211ENST00000486901 TAL1P17542 331 aaPredicted RBP13.62□□□□□ -0.23
HSPG2-211ENST00000486901 SETQ01105 290 aaPredicted RBP13.62□□□□□ -0.23
HSPG2-211ENST00000486901 PTGISQ16647 500 aa13.62□□□□□ -0.23
HSPG2-211ENST00000486901 EMBQ6PCB8 327 aa13.62□□□□□ -0.23
HSPG2-211ENST00000486901 TAF4BQ92750 862 aa13.62□□□□□ -0.23
HSPG2-211ENST00000486901 ERGIC2Q96RQ1 377 aa13.62□□□□□ -0.23
HSPG2-211ENST00000486901 F8W031 263 aaPredicted RBP13.62□□□□□ -0.23
HSPG2-211ENST00000486901 KRT18P05783 430 aaKnown RBP13.62□□□□□ -0.23
HSPG2-211ENST00000486901 ABCB4P21439 1286 aa13.62□□□□□ -0.23
HSPG2-211ENST00000486901 HIBADHP31937 336 aaKnown RBP13.62□□□□□ -0.23
HSPG2-211ENST00000486901 RDXP35241 583 aaKnown RBP13.62□□□□□ -0.23
HSPG2-211ENST00000486901 PAK2Q13177 524 aa13.62□□□□□ -0.23
HSPG2-211ENST00000486901 CALCRLQ16602 461 aa13.62□□□□□ -0.23
HSPG2-211ENST00000486901 MAN2A1Q16706 1144 aa13.62□□□□□ -0.23
HSPG2-211ENST00000486901 PDXDC1Q6P996 788 aa13.62□□□□□ -0.23
HSPG2-211ENST00000486901 NEK8Q86SG6 692 aa13.62□□□□□ -0.23
HSPG2-211ENST00000486901 CCDC13Q8IYE1 715 aa13.62□□□□□ -0.23
HSPG2-211ENST00000486901 LARP4BQ92615 738 aaKnown RBP13.62□□□□□ -0.23
HSPG2-211ENST00000486901 CABS1Q96KC9 395 aa13.62□□□□□ -0.23
HSPG2-211ENST00000486901 NLRP3Q96P20 1036 aa13.62□□□□□ -0.23
HSPG2-211ENST00000486901 KIF1AQ12756 1690 aa13.62□□□□□ -0.23
HSPG2-211ENST00000486901 COL4A1P02462 1669 aa13.62□□□□□ -0.23
HSPG2-211ENST00000486901 USP17L5A8MUK1 530 aa13.62□□□□□ -0.23
HSPG2-211ENST00000486901 PPP1R12BO60237 982 aaPredicted RBP13.62□□□□□ -0.23
HSPG2-211ENST00000486901 NTSR2O95665 410 aa13.62□□□□□ -0.23
HSPG2-211ENST00000486901 SLC9A1P19634 815 aa13.62□□□□□ -0.23
HSPG2-211ENST00000486901 SCP2P22307 547 aa13.62□□□□□ -0.23
HSPG2-211ENST00000486901 IL6STP40189 918 aaPredicted RBP13.62□□□□□ -0.23
HSPG2-211ENST00000486901 SLCO1A2P46721 670 aa13.62□□□□□ -0.23
HSPG2-211ENST00000486901 PICALMQ13492 652 aa13.62□□□□□ -0.23
HSPG2-211ENST00000486901 SLC9C1Q4G0N8 1177 aa13.62□□□□□ -0.23
HSPG2-211ENST00000486901 INTS5Q6P9B9 1019 aaKnown RBP13.62□□□□□ -0.23
HSPG2-211ENST00000486901 IQCKQ8N0W5 287 aa13.62□□□□□ -0.23
HSPG2-211ENST00000486901 TRIM51Q9BSJ1 452 aa13.62□□□□□ -0.23
HSPG2-211ENST00000486901 CCDC87Q9NVE4 849 aa13.62□□□□□ -0.23
HSPG2-211ENST00000486901 STAT3P40763 770 aa13.61□□□□□ -0.23
HSPG2-211ENST00000486901 IFNAR2P48551 515 aa13.61□□□□□ -0.23
HSPG2-211ENST00000486901 HGSNATQ68CP4 663 aa13.61□□□□□ -0.23
HSPG2-211ENST00000486901 CCDC91Q7Z6B0 441 aa13.61□□□□□ -0.23
HSPG2-211ENST00000486901 PYM1Q9BRP8 204 aaKnown RBP13.61□□□□□ -0.23
HSPG2-211ENST00000486901 CCSER1Q9C0I3 900 aa13.61□□□□□ -0.23
HSPG2-211ENST00000486901 BARHL2Q9NY43 387 aa13.61□□□□□ -0.23
HSPG2-211ENST00000486901 ANKIB1Q9P2G1 1089 aa13.61□□□□□ -0.23
HSPG2-211ENST00000486901 CNOT8Q9UFF9 292 aaKnown RBP13.61□□□□□ -0.23
HSPG2-211ENST00000486901 SKAP2O75563 359 aaPredicted RBP13.61□□□□□ -0.23
HSPG2-211ENST00000486901 HSD17B3P37058 310 aa13.61□□□□□ -0.23
HSPG2-211ENST00000486901 MDH1P40925 334 aaKnown RBP13.61□□□□□ -0.23
HSPG2-211ENST00000486901 ZNF211Q13398 564 aaPredicted RBP13.61□□□□□ -0.23
HSPG2-211ENST00000486901 FAM98CQ17RN3 349 aaKnown RBP13.61□□□□□ -0.23
HSPG2-211ENST00000486901 HERC4Q5GLZ8 1057 aaPredicted RBP13.61□□□□□ -0.23
HSPG2-211ENST00000486901 ATP6V1G3Q96LB4 118 aa13.61□□□□□ -0.23
HSPG2-211ENST00000486901 PNMA5Q96PV4 448 aa13.61□□□□□ -0.23
HSPG2-211ENST00000486901 EPN3Q9H201 632 aa13.61□□□□□ -0.23
HSPG2-211ENST00000486901 MLXIPLQ9NP71 852 aa13.61□□□□□ -0.23
HSPG2-211ENST00000486901 SRP68Q9UHB9 627 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms