RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 CYP3A7-CYP3A51PA0A087WV96 503 aa19.98■□□□□ 0.79
PDLIM7-207ENST00000486828 CYP3A7P24462 503 aa19.98■□□□□ 0.79
PDLIM7-207ENST00000486828 PTGER2P43116 358 aa19.98■□□□□ 0.79
PDLIM7-207ENST00000486828 COASYQ13057 564 aa19.98■□□□□ 0.79
PDLIM7-207ENST00000486828 CCDC122Q5T0U0 273 aa19.98■□□□□ 0.79
PDLIM7-207ENST00000486828 TMEM179Q6ZVK1 233 aa19.98■□□□□ 0.79
PDLIM7-207ENST00000486828 C2CD5Q86YS7 1000 aa19.98■□□□□ 0.79
PDLIM7-207ENST00000486828 SIAH1Q8IUQ4 282 aa19.98■□□□□ 0.79
PDLIM7-207ENST00000486828 MBOAT7Q96N66 472 aa19.98■□□□□ 0.79
PDLIM7-207ENST00000486828 SGIP1Q9BQI5 828 aa19.98■□□□□ 0.79
PDLIM7-207ENST00000486828 ARFGAP3Q9NP61 516 aa19.98■□□□□ 0.79
PDLIM7-207ENST00000486828 CCDC151A5D8V7 595 aa19.98■□□□□ 0.79
PDLIM7-207ENST00000486828 TBC1D8O95759 1140 aa19.98■□□□□ 0.79
PDLIM7-207ENST00000486828 HNRNPH3P31942 346 aaKnown RBP19.98■□□□□ 0.79
PDLIM7-207ENST00000486828 ICA1Q05084 483 aa19.98■□□□□ 0.79
PDLIM7-207ENST00000486828 AP3B2Q13367 1082 aa19.98■□□□□ 0.79
PDLIM7-207ENST00000486828 BRD3Q15059 726 aa19.98■□□□□ 0.79
PDLIM7-207ENST00000486828 STYK1Q6J9G0 422 aa19.98■□□□□ 0.79
PDLIM7-207ENST00000486828 MOXD1Q6UVY6 613 aa19.98■□□□□ 0.79
PDLIM7-207ENST00000486828 KIAA1328Q86T90 577 aa19.98■□□□□ 0.79
PDLIM7-207ENST00000486828 MYOCDQ8IZQ8 938 aa19.98■□□□□ 0.79
PDLIM7-207ENST00000486828 MSANTD4Q8NCY6 345 aa19.98■□□□□ 0.79
PDLIM7-207ENST00000486828 EHBP1Q8NDI1 1231 aa19.98■□□□□ 0.79
PDLIM7-207ENST00000486828 JAKMIP2Q96AA8 810 aa19.98■□□□□ 0.79
PDLIM7-207ENST00000486828 ANKZF1Q9H8Y5 726 aa19.98■□□□□ 0.79
PDLIM7-207ENST00000486828 SPON1Q9HCB6 807 aa19.98■□□□□ 0.79
PDLIM7-207ENST00000486828 SERPINA10Q9UK55 444 aa19.98■□□□□ 0.79
PDLIM7-207ENST00000486828 SCN9AQ15858 1988 aa19.97■□□□□ 0.79
PDLIM7-207ENST00000486828 CTAGE15A4D2H0 777 aa19.97■□□□□ 0.79
PDLIM7-207ENST00000486828 KRT86O43790 486 aa19.97■□□□□ 0.79
PDLIM7-207ENST00000486828 IPO7O95373 1038 aaKnown RBP19.97■□□□□ 0.79
PDLIM7-207ENST00000486828 CTAGE8P0CG41 777 aa19.97■□□□□ 0.79
PDLIM7-207ENST00000486828 PDE4CQ08493 712 aa19.97■□□□□ 0.79
PDLIM7-207ENST00000486828 CTAGE6Q86UF2 777 aa19.97■□□□□ 0.79
PDLIM7-207ENST00000486828 CTAGE4Q8IX94 777 aa19.97■□□□□ 0.79
PDLIM7-207ENST00000486828 BMP2KQ9NSY1 1161 aaPredicted RBP19.97■□□□□ 0.79
PDLIM7-207ENST00000486828 PANK4Q9NVE7 773 aa19.97■□□□□ 0.79
PDLIM7-207ENST00000486828 LRRC41Q15345 812 aa19.96■□□□□ 0.79
PDLIM7-207ENST00000486828 MCTP2Q6DN12 878 aa19.96■□□□□ 0.79
PDLIM7-207ENST00000486828 TRAPPC11Q7Z392 1133 aa19.96■□□□□ 0.79
PDLIM7-207ENST00000486828 CCDC84Q86UT8 332 aaPredicted RBP19.96■□□□□ 0.79
PDLIM7-207ENST00000486828 GLIS3Q8NEA6 775 aa19.96■□□□□ 0.79
PDLIM7-207ENST00000486828 GMCL1P1Q8NEA9 526 aa19.96■□□□□ 0.79
PDLIM7-207ENST00000486828 PRDM4Q9UKN5 801 aa19.96■□□□□ 0.79
PDLIM7-207ENST00000486828 PLAGL2Q9UPG8 496 aa19.96■□□□□ 0.79
PDLIM7-207ENST00000486828 MEIS2O14770 477 aa19.96■□□□□ 0.79
PDLIM7-207ENST00000486828 ZCWPW2Q504Y3 356 aa19.96■□□□□ 0.79
PDLIM7-207ENST00000486828 FAM26FQ5R3K3 315 aa19.96■□□□□ 0.79
PDLIM7-207ENST00000486828 SLFN12Q8IYM2 578 aa19.96■□□□□ 0.79
PDLIM7-207ENST00000486828 RAB21Q9UL25 225 aa19.96■□□□□ 0.79
PDLIM7-207ENST00000486828 E9PMD0 336 aa19.95■□□□□ 0.78
PDLIM7-207ENST00000486828 F5H6K3 240 aa19.95■□□□□ 0.78
PDLIM7-207ENST00000486828 H0YIN7 160 aa19.95■□□□□ 0.78
PDLIM7-207ENST00000486828 SASH3O75995 380 aa19.95■□□□□ 0.78
PDLIM7-207ENST00000486828 TFRCP02786 760 aaKnown RBP19.95■□□□□ 0.78
PDLIM7-207ENST00000486828 KLRC3Q07444 240 aa19.95■□□□□ 0.78
PDLIM7-207ENST00000486828 TERF2Q15554 542 aa19.95■□□□□ 0.78
PDLIM7-207ENST00000486828 ABCB5Q2M3G0 1257 aa19.95■□□□□ 0.78
PDLIM7-207ENST00000486828 CRYGNQ8WXF5 182 aa19.95■□□□□ 0.78
PDLIM7-207ENST00000486828 GMCL1Q96IK5 515 aa19.95■□□□□ 0.78
PDLIM7-207ENST00000486828 AMNQ9BXJ7 453 aa19.95■□□□□ 0.78
PDLIM7-207ENST00000486828 ST7Q9NRC1 585 aa19.95■□□□□ 0.78
PDLIM7-207ENST00000486828 TFR2Q9UP52 801 aa19.95■□□□□ 0.78
PDLIM7-207ENST00000486828 KIAA1024Q9UPX6 916 aa19.95■□□□□ 0.78
PDLIM7-207ENST00000486828 SSBP05455 408 aaKnown RBP eCLIP19.94■□□□□ 0.78
PDLIM7-207ENST00000486828 PLA2G4BP0C869 781 aa19.94■□□□□ 0.78
PDLIM7-207ENST00000486828 CCDC65Q8IXS2 484 aa19.94■□□□□ 0.78
PDLIM7-207ENST00000486828 HNRNPLLQ8WVV9 542 aaKnown RBP19.94■□□□□ 0.78
PDLIM7-207ENST00000486828 LACRTQ9GZZ8 138 aa19.94■□□□□ 0.78
PDLIM7-207ENST00000486828 POTEB3A0JP26 581 aa19.94■□□□□ 0.78
PDLIM7-207ENST00000486828 RCCD1A6NED2 376 aa19.94■□□□□ 0.78
PDLIM7-207ENST00000486828 POTECB2RU33 542 aa19.94■□□□□ 0.78
PDLIM7-207ENST00000486828 EPHB6O15197 1021 aa19.94■□□□□ 0.78
PDLIM7-207ENST00000486828 GDF11O95390 407 aa19.94■□□□□ 0.78
PDLIM7-207ENST00000486828 FKBP3Q00688 224 aaKnown RBP19.94■□□□□ 0.78
PDLIM7-207ENST00000486828 PAPD7Q5XG87 772 aaKnown RBP19.94■□□□□ 0.78
PDLIM7-207ENST00000486828 POTEBQ6S5H4 581 aa19.94■□□□□ 0.78
PDLIM7-207ENST00000486828 CCDC42Q96M95 316 aa19.94■□□□□ 0.78
PDLIM7-207ENST00000486828 PURBQ96QR8 312 aaKnown RBP19.94■□□□□ 0.78
PDLIM7-207ENST00000486828 MMRN2Q9H8L6 949 aa19.94■□□□□ 0.78
PDLIM7-207ENST00000486828 FAM207AQ9NSI2 230 aaPredicted RBP19.94■□□□□ 0.78
PDLIM7-207ENST00000486828 ATRNL1Q5VV63 1379 aa19.94■□□□□ 0.78
PDLIM7-207ENST00000486828 SLX4Q8IY92 1834 aa19.93■□□□□ 0.78
PDLIM7-207ENST00000486828 NDUFB10O96000 172 aa19.93■□□□□ 0.78
PDLIM7-207ENST00000486828 VAV2P52735 878 aa19.93■□□□□ 0.78
PDLIM7-207ENST00000486828 ARHGAP4P98171 946 aa19.93■□□□□ 0.78
PDLIM7-207ENST00000486828 LONRF2Q1L5Z9 754 aa19.93■□□□□ 0.78
PDLIM7-207ENST00000486828 FBXO11Q86XK2 927 aa19.93■□□□□ 0.78
PDLIM7-207ENST00000486828 ETNPPLQ8TBG4 499 aa19.93■□□□□ 0.78
PDLIM7-207ENST00000486828 PNKPQ96T60 521 aa19.93■□□□□ 0.78
PDLIM7-207ENST00000486828 FUT8Q9BYC5 575 aa19.93■□□□□ 0.78
PDLIM7-207ENST00000486828 UBXN6Q9BZV1 441 aa19.93■□□□□ 0.78
PDLIM7-207ENST00000486828 TSGA10Q9BZW7 698 aa19.93■□□□□ 0.78
PDLIM7-207ENST00000486828 PCDHA2Q9Y5H9 948 aa19.93■□□□□ 0.78
PDLIM7-207ENST00000486828 COL4A3BPQ9Y5P4 624 aa19.93■□□□□ 0.78
PDLIM7-207ENST00000486828 TBX3O15119 743 aa19.92■□□□□ 0.78
PDLIM7-207ENST00000486828 ENTPD3O75355 529 aa19.92■□□□□ 0.78
PDLIM7-207ENST00000486828 ATP1A1P05023 1023 aaKnown RBP19.92■□□□□ 0.78
PDLIM7-207ENST00000486828 CYP11B2P19099 503 aa19.92■□□□□ 0.78
PDLIM7-207ENST00000486828 SPA17Q15506 151 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms