RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 RGL1Q9NZL6 768 aa14.57□□□□□ -0.08
HMGN1-216ENST00000486741 RGPD1P0DJD0 1748 aa14.57□□□□□ -0.08
HMGN1-216ENST00000486741 PALM3A6NDB9 673 aaPredicted RBP14.57□□□□□ -0.08
HMGN1-216ENST00000486741 SMIM23A6NLE4 172 aa14.57□□□□□ -0.08
HMGN1-216ENST00000486741 LGALS16A8MUM7 142 aa14.57□□□□□ -0.08
HMGN1-216ENST00000486741 WNT7AO00755 349 aa14.57□□□□□ -0.08
HMGN1-216ENST00000486741 LLGL1Q15334 1064 aa14.57□□□□□ -0.08
HMGN1-216ENST00000486741 HSF2BPO75031 334 aa14.56□□□□□ -0.08
HMGN1-216ENST00000486741 VAV2P52735 878 aa14.56□□□□□ -0.08
HMGN1-216ENST00000486741 ADGRG1Q9Y653 693 aa14.56□□□□□ -0.08
HMGN1-216ENST00000486741 CYTH3O43739 400 aa14.56□□□□□ -0.08
HMGN1-216ENST00000486741 MYL1P05976 194 aa14.56□□□□□ -0.08
HMGN1-216ENST00000486741 EHHADHQ08426 723 aa14.56□□□□□ -0.08
HMGN1-216ENST00000486741 GRM1Q13255 1194 aa14.56□□□□□ -0.08
HMGN1-216ENST00000486741 KRT26Q7Z3Y9 468 aa14.56□□□□□ -0.08
HMGN1-216ENST00000486741 TC2NQ8N9U0 490 aa14.56□□□□□ -0.08
HMGN1-216ENST00000486741 RAD54LQ92698 747 aa14.56□□□□□ -0.08
HMGN1-216ENST00000486741 FNBP1Q96RU3 617 aa14.56□□□□□ -0.08
HMGN1-216ENST00000486741 ZMYND12Q9H0C1 365 aa14.56□□□□□ -0.08
HMGN1-216ENST00000486741 MYO1AQ9UBC5 1043 aa14.56□□□□□ -0.08
HMGN1-216ENST00000486741 TFR2Q9UP52 801 aa14.56□□□□□ -0.08
HMGN1-216ENST00000486741 LRRN2O75325 713 aa14.56□□□□□ -0.08
HMGN1-216ENST00000486741 ZBED6P86452 979 aa14.56□□□□□ -0.08
HMGN1-216ENST00000486741 VWA3BQ502W6 1294 aa14.56□□□□□ -0.08
HMGN1-216ENST00000486741 SFR1Q86XK3 245 aa14.56□□□□□ -0.08
HMGN1-216ENST00000486741 DDX4Q9NQI0 724 aaKnown RBP14.56□□□□□ -0.08
HMGN1-216ENST00000486741 ADD3Q9UEY8 706 aaKnown RBP14.56□□□□□ -0.08
HMGN1-216ENST00000486741 ADAMTS1Q9UHI8 967 aa14.56□□□□□ -0.08
HMGN1-216ENST00000486741 SLC37A4O43826 429 aa14.55□□□□□ -0.08
HMGN1-216ENST00000486741 SRGNP10124 158 aa14.55□□□□□ -0.08
HMGN1-216ENST00000486741 PRAMEF18Q5VWM3 479 aa14.55□□□□□ -0.08
HMGN1-216ENST00000486741 CIAPIN1Q6FI81 312 aa14.55□□□□□ -0.08
HMGN1-216ENST00000486741 CCSER1Q9C0I3 900 aa14.55□□□□□ -0.08
HMGN1-216ENST00000486741 LARSQ9P2J5 1176 aaKnown RBP14.55□□□□□ -0.08
HMGN1-216ENST00000486741 MYMKA6NI61 221 aa14.55□□□□□ -0.08
HMGN1-216ENST00000486741 PPP1R3GB7ZBB8 358 aa14.55□□□□□ -0.08
HMGN1-216ENST00000486741 MOCS3O95396 460 aa14.55□□□□□ -0.08
HMGN1-216ENST00000486741 DLATP10515 647 aaKnown RBP14.55□□□□□ -0.08
HMGN1-216ENST00000486741 OAS2P29728 719 aaKnown RBP14.55□□□□□ -0.08
HMGN1-216ENST00000486741 COASYQ13057 564 aa14.55□□□□□ -0.08
HMGN1-216ENST00000486741 TMED8Q6PL24 325 aaPredicted RBP14.55□□□□□ -0.08
HMGN1-216ENST00000486741 SND1Q7KZF4 910 aaKnown RBP eCLIP14.55□□□□□ -0.08
HMGN1-216ENST00000486741 USP37Q86T82 979 aa14.55□□□□□ -0.08
HMGN1-216ENST00000486741 LMBR1Q8WVP7 490 aa14.55□□□□□ -0.08
HMGN1-216ENST00000486741 PCDHAC2Q9Y5I4 1007 aa14.55□□□□□ -0.08
HMGN1-216ENST00000486741 PHLPP2Q6ZVD8 1323 aa14.55□□□□□ -0.08
HMGN1-216ENST00000486741 A0A1B0GTH6 734 aa14.55□□□□□ -0.08
HMGN1-216ENST00000486741 GNA14O95837 355 aa14.55□□□□□ -0.08
HMGN1-216ENST00000486741 STAT1P42224 750 aa14.55□□□□□ -0.08
HMGN1-216ENST00000486741 CLCN6P51797 869 aa14.55□□□□□ -0.08
HMGN1-216ENST00000486741 NR1I3Q14994 352 aa14.55□□□□□ -0.08
HMGN1-216ENST00000486741 STRIP1Q5VSL9 837 aa14.55□□□□□ -0.08
HMGN1-216ENST00000486741 SLC30A10Q6XR72 485 aa14.55□□□□□ -0.08
HMGN1-216ENST00000486741 GBP6Q6ZN66 633 aa14.55□□□□□ -0.08
HMGN1-216ENST00000486741 SRGAP1Q7Z6B7 1085 aa14.55□□□□□ -0.08
HMGN1-216ENST00000486741 RAVER2Q9HCJ3 691 aaKnown RBP14.55□□□□□ -0.08
HMGN1-216ENST00000486741 CTTNBP2NLQ9P2B4 639 aa14.55□□□□□ -0.08
HMGN1-216ENST00000486741 TLDC2A0PJX2 215 aa14.55□□□□□ -0.08
HMGN1-216ENST00000486741 DDTLA6NHG4 134 aaPredicted RBP14.55□□□□□ -0.08
HMGN1-216ENST00000486741 EEPD1Q7L9B9 569 aa14.55□□□□□ -0.08
HMGN1-216ENST00000486741 ZFPM1Q8IX07 1006 aa14.55□□□□□ -0.08
HMGN1-216ENST00000486741 ADSSL1Q8N142 457 aa14.55□□□□□ -0.08
HMGN1-216ENST00000486741 DCAF4Q8WV16 495 aa14.55□□□□□ -0.08
HMGN1-216ENST00000486741 PRMT6Q96LA8 375 aaPredicted RBP14.55□□□□□ -0.08
HMGN1-216ENST00000486741 RIC8AQ9NPQ8 531 aa14.55□□□□□ -0.08
HMGN1-216ENST00000486741 AGPAT5Q9NUQ2 364 aa14.55□□□□□ -0.08
HMGN1-216ENST00000486741 KCNK3O14649 394 aa14.54□□□□□ -0.08
HMGN1-216ENST00000486741 NEFHP12036 1026 aa14.54□□□□□ -0.08
HMGN1-216ENST00000486741 RAD9BQ6WBX8 426 aa14.54□□□□□ -0.08
HMGN1-216ENST00000486741 AMIGO3Q86WK7 504 aa14.54□□□□□ -0.08
HMGN1-216ENST00000486741 BANK1Q8NDB2 785 aa14.54□□□□□ -0.08
HMGN1-216ENST00000486741 PARD6BQ9BYG5 372 aa14.54□□□□□ -0.08
HMGN1-216ENST00000486741 KLK7P49862 253 aa14.54□□□□□ -0.08
HMGN1-216ENST00000486741 SMC1AQ14683 1233 aaKnown RBP14.54□□□□□ -0.08
HMGN1-216ENST00000486741 RPS6KA1Q15418 735 aa14.54□□□□□ -0.08
HMGN1-216ENST00000486741 NAA35Q5VZE5 725 aa14.54□□□□□ -0.08
HMGN1-216ENST00000486741 PEX26Q7Z412 305 aa14.54□□□□□ -0.08
HMGN1-216ENST00000486741 DEFB132Q7Z7B7 95 aa14.54□□□□□ -0.08
HMGN1-216ENST00000486741 TRIM58Q8NG06 486 aa14.54□□□□□ -0.08
HMGN1-216ENST00000486741 HDAC6Q9UBN7 1215 aa14.54□□□□□ -0.08
HMGN1-216ENST00000486741 GOLGA6L10A0A0M3HER8 536 aa14.54□□□□□ -0.08
HMGN1-216ENST00000486741 ZEB2O60315 1214 aa14.54□□□□□ -0.08
HMGN1-216ENST00000486741 FTCDO95954 541 aa14.54□□□□□ -0.08
HMGN1-216ENST00000486741 CETN2P41208 172 aa14.54□□□□□ -0.08
HMGN1-216ENST00000486741 CCDC25Q86WR0 208 aa14.54□□□□□ -0.08
HMGN1-216ENST00000486741 GPATCH11Q8N954 259 aa14.54□□□□□ -0.08
HMGN1-216ENST00000486741 TRIM10Q9UDY6 481 aa14.54□□□□□ -0.08
HMGN1-216ENST00000486741 RGPD5Q99666 1765 aa14.53□□□□□ -0.08
HMGN1-216ENST00000486741 POLRMTO00411 1230 aaKnown RBP14.53□□□□□ -0.08
HMGN1-216ENST00000486741 SPOPO43791 374 aa14.53□□□□□ -0.08
HMGN1-216ENST00000486741 CTNNA2P26232 953 aa14.53□□□□□ -0.08
HMGN1-216ENST00000486741 EZH2Q15910 746 aaKnown RBP14.53□□□□□ -0.08
HMGN1-216ENST00000486741 RTKN2Q8IZC4 609 aa14.53□□□□□ -0.08
HMGN1-216ENST00000486741 ANKRD35Q8N283 1001 aa14.53□□□□□ -0.08
HMGN1-216ENST00000486741 PPM1KQ8N3J5 372 aa14.53□□□□□ -0.08
HMGN1-216ENST00000486741 IFT74Q96LB3 600 aa14.53□□□□□ -0.08
HMGN1-216ENST00000486741 TMEM39BQ9GZU3 492 aa14.53□□□□□ -0.08
HMGN1-216ENST00000486741 CALCOCO1Q9P1Z2 691 aa14.53□□□□□ -0.08
HMGN1-216ENST00000486741 FAM186BQ8IYM0 893 aa14.53□□□□□ -0.08
HMGN1-216ENST00000486741 BMP6P22004 513 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms