RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 MKNK2Q9HBH9 465 aa11.51□□□□□ -0.57
PTPN7-213ENST00000486116 ARPP21Q9UBL0 812 aaPredicted RBP11.51□□□□□ -0.57
PTPN7-213ENST00000486116 CCPG1Q9ULG6 757 aa11.51□□□□□ -0.57
PTPN7-213ENST00000486116 ISY1Q9ULR0 285 aaKnown RBP11.51□□□□□ -0.57
PTPN7-213ENST00000486116 PCDHGC5Q9Y5F6 944 aa11.51□□□□□ -0.57
PTPN7-213ENST00000486116 RSPH10B2B2RC85 870 aa11.5□□□□□ -0.57
PTPN7-213ENST00000486116 TTLL1O95922 423 aa11.5□□□□□ -0.57
PTPN7-213ENST00000486116 RSPH10BP0C881 870 aa11.5□□□□□ -0.57
PTPN7-213ENST00000486116 ATF7P17544 494 aaPredicted RBP11.5□□□□□ -0.57
PTPN7-213ENST00000486116 PSEN2P49810 448 aa11.5□□□□□ -0.57
PTPN7-213ENST00000486116 PDE4DQ08499 809 aa11.5□□□□□ -0.57
PTPN7-213ENST00000486116 IKQ13123 557 aaPredicted RBP11.5□□□□□ -0.57
PTPN7-213ENST00000486116 CCDC62Q6P9F0 684 aa11.5□□□□□ -0.57
PTPN7-213ENST00000486116 RASGRP2Q7LDG7 609 aa11.5□□□□□ -0.57
PTPN7-213ENST00000486116 KIAA2013Q8IYS2 634 aa11.5□□□□□ -0.57
PTPN7-213ENST00000486116 CLP1Q92989 425 aaKnown RBP11.5□□□□□ -0.57
PTPN7-213ENST00000486116 IL17RAQ96F46 866 aa11.5□□□□□ -0.57
PTPN7-213ENST00000486116 DDRGK1Q96HY6 314 aa11.5□□□□□ -0.57
PTPN7-213ENST00000486116 DLL3Q9NYJ7 618 aa11.5□□□□□ -0.57
PTPN7-213ENST00000486116 PRR12Q9ULL5 1215 aa11.5□□□□□ -0.57
PTPN7-213ENST00000486116 ADGRA3Q8IWK6 1321 aa11.5□□□□□ -0.57
PTPN7-213ENST00000486116 TTC3P53804 2025 aa11.5□□□□□ -0.57
PTPN7-213ENST00000486116 PTPDC1A2A3K4 754 aa11.49□□□□□ -0.57
PTPN7-213ENST00000486116 HAS3O00219 553 aa11.49□□□□□ -0.57
PTPN7-213ENST00000486116 PLA2G6O60733 806 aa11.49□□□□□ -0.57
PTPN7-213ENST00000486116 ICAM1P05362 532 aa11.49□□□□□ -0.57
PTPN7-213ENST00000486116 ARP10275 920 aa11.49□□□□□ -0.57
PTPN7-213ENST00000486116 THPOP40225 353 aa11.49□□□□□ -0.57
PTPN7-213ENST00000486116 NRIP1P48552 1158 aa11.49□□□□□ -0.57
PTPN7-213ENST00000486116 RBM10P98175 930 aaKnown RBP11.49□□□□□ -0.57
PTPN7-213ENST00000486116 MFSD10Q14728 455 aa11.49□□□□□ -0.57
PTPN7-213ENST00000486116 SBK1Q52WX2 424 aa11.49□□□□□ -0.57
PTPN7-213ENST00000486116 ASTLQ6HA08 431 aaPredicted RBP11.49□□□□□ -0.57
PTPN7-213ENST00000486116 KCTD1Q719H9 257 aa11.49□□□□□ -0.57
PTPN7-213ENST00000486116 ZBTB33Q86T24 672 aa11.49□□□□□ -0.57
PTPN7-213ENST00000486116 FAM9BQ8IZU0 186 aa11.49□□□□□ -0.57
PTPN7-213ENST00000486116 KREMEN2Q8NCW0 462 aa11.49□□□□□ -0.57
PTPN7-213ENST00000486116 SEPT8Q92599 483 aa11.49□□□□□ -0.57
PTPN7-213ENST00000486116 GMCL1Q96IK5 515 aa11.49□□□□□ -0.57
PTPN7-213ENST00000486116 SMOC2Q9H3U7 446 aa11.49□□□□□ -0.57
PTPN7-213ENST00000486116 C1orf115Q9H7X2 142 aa11.49□□□□□ -0.57
PTPN7-213ENST00000486116 RWDD3Q9Y3V2 267 aa11.49□□□□□ -0.57
PTPN7-213ENST00000486116 PLIN4Q96Q06 1357 aa11.49□□□□□ -0.57
PTPN7-213ENST00000486116 PRDM1O75626 825 aa11.48□□□□□ -0.57
PTPN7-213ENST00000486116 BRD1O95696 1058 aa11.48□□□□□ -0.57
PTPN7-213ENST00000486116 F2P00734 622 aa11.48□□□□□ -0.57
PTPN7-213ENST00000486116 ZNF286BP0CG31 522 aa11.48□□□□□ -0.57
PTPN7-213ENST00000486116 TRIM27P14373 513 aa11.48□□□□□ -0.57
PTPN7-213ENST00000486116 CASTP20810 708 aaKnown RBP11.48□□□□□ -0.57
PTPN7-213ENST00000486116 MCCP23508 829 aa11.48□□□□□ -0.57
PTPN7-213ENST00000486116 CALML3P27482 149 aa11.48□□□□□ -0.57
PTPN7-213ENST00000486116 SLC1A4P43007 532 aa11.48□□□□□ -0.57
PTPN7-213ENST00000486116 ST3GAL2Q16842 350 aa11.48□□□□□ -0.57
PTPN7-213ENST00000486116 LY6KQ17RY6 165 aa11.48□□□□□ -0.57
PTPN7-213ENST00000486116 KIAA0753Q2KHM9 967 aa11.48□□□□□ -0.57
PTPN7-213ENST00000486116 RBM23Q86U06 439 aaKnown RBP11.48□□□□□ -0.57
PTPN7-213ENST00000486116 SERINC5Q86VE9 423 aa11.48□□□□□ -0.57
PTPN7-213ENST00000486116 PLAGL2Q9UPG8 496 aa11.48□□□□□ -0.57
PTPN7-213ENST00000486116 GH1P01241 217 aa11.47□□□□□ -0.57
PTPN7-213ENST00000486116 ITGB1P05556 798 aa11.47□□□□□ -0.57
PTPN7-213ENST00000486116 SP100P23497 879 aaPredicted RBP11.47□□□□□ -0.57
PTPN7-213ENST00000486116 RARSP54136 660 aaKnown RBP11.47□□□□□ -0.57
PTPN7-213ENST00000486116 COL9A2Q14055 689 aaPredicted RBP11.47□□□□□ -0.57
PTPN7-213ENST00000486116 CHST3Q7LGC8 479 aa11.47□□□□□ -0.57
PTPN7-213ENST00000486116 TRMT2AQ8IZ69 625 aaKnown RBP11.47□□□□□ -0.57
PTPN7-213ENST00000486116 VN1R2Q8NFZ6 395 aa11.47□□□□□ -0.57
PTPN7-213ENST00000486116 CLEC4DQ8WXI8 215 aa11.47□□□□□ -0.57
PTPN7-213ENST00000486116 PPP2R3CQ969Q6 453 aa11.47□□□□□ -0.57
PTPN7-213ENST00000486116 PLVAPQ9BX97 442 aa11.47□□□□□ -0.57
PTPN7-213ENST00000486116 PUS7LQ9H0K6 701 aaKnown RBP11.47□□□□□ -0.57
PTPN7-213ENST00000486116 RANBP17Q9H2T7 1088 aaKnown RBP11.47□□□□□ -0.57
PTPN7-213ENST00000486116 RALYQ9UKM9 306 aaKnown RBP11.47□□□□□ -0.57
PTPN7-213ENST00000486116 LOXHD1Q8IVV2 1947 aa11.47□□□□□ -0.57
PTPN7-213ENST00000486116 MINDY4BA8MYZ0 360 aa11.46□□□□□ -0.57
PTPN7-213ENST00000486116 CT47B1P0C2W7 299 aaPredicted RBP11.46□□□□□ -0.57
PTPN7-213ENST00000486116 MTMR3Q13615 1198 aa11.46□□□□□ -0.57
PTPN7-213ENST00000486116 DGKDQ16760 1214 aa11.46□□□□□ -0.57
PTPN7-213ENST00000486116 CWF19L1Q69YN2 538 aaKnown RBP11.46□□□□□ -0.57
PTPN7-213ENST00000486116 RCSD1Q6JBY9 416 aa11.46□□□□□ -0.57
PTPN7-213ENST00000486116 RNF207Q6ZRF8 634 aa11.46□□□□□ -0.57
PTPN7-213ENST00000486116 UBALD2Q8IYN6 164 aa11.46□□□□□ -0.57
PTPN7-213ENST00000486116 SPPL3Q8TCT6 385 aa11.46□□□□□ -0.57
PTPN7-213ENST00000486116 ATP8B4Q8TF62 1192 aa11.46□□□□□ -0.57
PTPN7-213ENST00000486116 P2RX5Q93086 422 aa11.46□□□□□ -0.57
PTPN7-213ENST00000486116 ZNF689Q96CS4 500 aaPredicted RBP11.46□□□□□ -0.57
PTPN7-213ENST00000486116 KATNAL1Q9BW62 490 aa11.46□□□□□ -0.57
PTPN7-213ENST00000486116 IL1RAPL2Q9NP60 686 aa11.46□□□□□ -0.57
PTPN7-213ENST00000486116 PAG1Q9NWQ8 432 aa11.46□□□□□ -0.57
PTPN7-213ENST00000486116 SORCS3Q9UPU3 1222 aa11.46□□□□□ -0.57
PTPN7-213ENST00000486116 FAM208BQ5VWN6 2430 aa11.46□□□□□ -0.58
PTPN7-213ENST00000486116 DOCK5Q9H7D0 1870 aa11.45□□□□□ -0.58
PTPN7-213ENST00000486116 GSG1L2A8MUP6 293 aa11.45□□□□□ -0.58
PTPN7-213ENST00000486116 LMNAP02545 664 aaKnown RBP11.45□□□□□ -0.58
PTPN7-213ENST00000486116 CTSHP09668 335 aa11.45□□□□□ -0.58
PTPN7-213ENST00000486116 CLCN5P51795 746 aa11.45□□□□□ -0.58
PTPN7-213ENST00000486116 RPS6P62753 249 aaKnown RBP11.45□□□□□ -0.58
PTPN7-213ENST00000486116 UBE3CQ15386 1083 aa11.45□□□□□ -0.58
PTPN7-213ENST00000486116 ANGPT1Q15389 498 aa11.45□□□□□ -0.58
PTPN7-213ENST00000486116 DHX37Q8IY37 1157 aaKnown RBP11.45□□□□□ -0.58
PTPN7-213ENST00000486116 ZNF444Q8N0Y2 327 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms