RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 PCNX4Q63HM2 1172 aa21.18■□□□□ 0.98
PRPF40A-209ENST00000486100 HERVK_113Q902F9 699 aa21.18■□□□□ 0.98
PRPF40A-209ENST00000486100 SCLYQ96I15 445 aa21.18■□□□□ 0.98
PRPF40A-209ENST00000486100 JAKMIP1Q96N16 626 aaKnown RBP21.18■□□□□ 0.98
PRPF40A-209ENST00000486100 KATNAL1Q9BW62 490 aa21.18■□□□□ 0.98
PRPF40A-209ENST00000486100 SEMA6BQ9H3T3 888 aa21.18■□□□□ 0.98
PRPF40A-209ENST00000486100 NOD1Q9Y239 953 aa21.18■□□□□ 0.98
PRPF40A-209ENST00000486100 STXBP5LQ9Y2K9 1186 aa21.18■□□□□ 0.98
PRPF40A-209ENST00000486100 SORBS3O60504 671 aa21.17■□□□□ 0.98
PRPF40A-209ENST00000486100 CPA1P15085 419 aa21.17■□□□□ 0.98
PRPF40A-209ENST00000486100 PSEN2P49810 448 aa21.17■□□□□ 0.98
PRPF40A-209ENST00000486100 FUT2Q10981 343 aa21.17■□□□□ 0.98
PRPF40A-209ENST00000486100 NEDD9Q14511 834 aa21.17■□□□□ 0.98
PRPF40A-209ENST00000486100 PTGISQ16647 500 aa21.17■□□□□ 0.98
PRPF40A-209ENST00000486100 HEATR3Q7Z4Q2 680 aa21.17■□□□□ 0.98
PRPF40A-209ENST00000486100 RETREG2Q8NC44 543 aa21.17■□□□□ 0.98
PRPF40A-209ENST00000486100 FAM161BQ96MY7 647 aa21.17■□□□□ 0.98
PRPF40A-209ENST00000486100 FAM217BQ9NTX9 383 aaPredicted RBP21.17■□□□□ 0.98
PRPF40A-209ENST00000486100 SCN10AQ9Y5Y9 1956 aa21.17■□□□□ 0.98
PRPF40A-209ENST00000486100 CNTNAP5Q8WYK1 1306 aa21.16■□□□□ 0.98
PRPF40A-209ENST00000486100 GOLGA8AA7E2F4 631 aa21.16■□□□□ 0.98
PRPF40A-209ENST00000486100 GOLGA8BA8MQT2 603 aa21.16■□□□□ 0.98
PRPF40A-209ENST00000486100 HAS3O00219 553 aa21.16■□□□□ 0.98
PRPF40A-209ENST00000486100 PITPNM1O00562 1244 aa21.16■□□□□ 0.98
PRPF40A-209ENST00000486100 FIBPO43427 364 aa21.16■□□□□ 0.98
PRPF40A-209ENST00000486100 EPB41L2O43491 1005 aaKnown RBP21.16■□□□□ 0.98
PRPF40A-209ENST00000486100 F2P00734 622 aa21.16■□□□□ 0.98
PRPF40A-209ENST00000486100 BFSP2Q13515 415 aa21.16■□□□□ 0.98
PRPF40A-209ENST00000486100 MFSD10Q14728 455 aa21.16■□□□□ 0.98
PRPF40A-209ENST00000486100 ERICH6BQ5W0A0 696 aa21.16■□□□□ 0.98
PRPF40A-209ENST00000486100 GDF6Q6KF10 455 aaPredicted RBP21.16■□□□□ 0.98
PRPF40A-209ENST00000486100 BLOC1S2Q6QNY1 142 aa21.16■□□□□ 0.98
PRPF40A-209ENST00000486100 Q6ZUG5 572 aa21.16■□□□□ 0.98
PRPF40A-209ENST00000486100 C7orf31Q8N865 590 aa21.16■□□□□ 0.98
PRPF40A-209ENST00000486100 ALG1Q9BT22 464 aa21.16■□□□□ 0.98
PRPF40A-209ENST00000486100 MTIF3Q9H2K0 278 aaKnown RBP21.16■□□□□ 0.98
PRPF40A-209ENST00000486100 BCAS3Q9H6U6 928 aa21.16■□□□□ 0.98
PRPF40A-209ENST00000486100 PPP4R2Q9NY27 417 aa21.16■□□□□ 0.98
PRPF40A-209ENST00000486100 GTF2IRD1Q9UHL9 959 aa21.16■□□□□ 0.98
PRPF40A-209ENST00000486100 V9GY48 417 aaPredicted RBP21.16■□□□□ 0.98
PRPF40A-209ENST00000486100 LAMA2P24043 3122 aaKnown RBP21.15■□□□□ 0.98
PRPF40A-209ENST00000486100 ZNF286BP0CG31 522 aa21.15■□□□□ 0.98
PRPF40A-209ENST00000486100 PSMA5P28066 241 aa21.15■□□□□ 0.98
PRPF40A-209ENST00000486100 SEMA3FQ13275 785 aa21.15■□□□□ 0.98
PRPF40A-209ENST00000486100 KIAA0753Q2KHM9 967 aa21.15■□□□□ 0.98
PRPF40A-209ENST00000486100 NLRX1Q86UT6 975 aa21.15■□□□□ 0.98
PRPF40A-209ENST00000486100 FBXL16Q8N461 479 aa21.15■□□□□ 0.98
PRPF40A-209ENST00000486100 VWCEQ96DN2 955 aa21.15■□□□□ 0.98
PRPF40A-209ENST00000486100 GUCD1Q96NT3 240 aa21.15■□□□□ 0.98
PRPF40A-209ENST00000486100 SENP7Q9BQF6 1050 aa21.15■□□□□ 0.98
PRPF40A-209ENST00000486100 HDAC6Q9UBN7 1215 aa21.15■□□□□ 0.98
PRPF40A-209ENST00000486100 KIAA1217Q5T5P2 1943 aa21.15■□□□□ 0.98
PRPF40A-209ENST00000486100 TMEM265A0A087WTH1 108 aa21.14■□□□□ 0.97
PRPF40A-209ENST00000486100 SPDYE3A6NKU9 549 aa21.14■□□□□ 0.97
PRPF40A-209ENST00000486100 PFKMP08237 780 aa21.14■□□□□ 0.97
PRPF40A-209ENST00000486100 IQCF3P0C7M6 154 aa21.14■□□□□ 0.97
PRPF40A-209ENST00000486100 CDC27P30260 824 aa21.14■□□□□ 0.97
PRPF40A-209ENST00000486100 RFC2P35250 354 aa21.14■□□□□ 0.97
PRPF40A-209ENST00000486100 APOBRQ0VD83 1088 aa21.14■□□□□ 0.97
PRPF40A-209ENST00000486100 UBE2SQ16763 222 aa21.14■□□□□ 0.97
PRPF40A-209ENST00000486100 WWC2Q6AWC2 1192 aa21.14■□□□□ 0.97
PRPF40A-209ENST00000486100 METTL7BQ6UX53 244 aa21.14■□□□□ 0.97
PRPF40A-209ENST00000486100 CYFIP1Q7L576 1253 aa21.14■□□□□ 0.97
PRPF40A-209ENST00000486100 OTOP2Q7RTS6 562 aa21.14■□□□□ 0.97
PRPF40A-209ENST00000486100 TEX2Q8IWB9 1127 aa21.14■□□□□ 0.97
PRPF40A-209ENST00000486100 BRF1Q92994 677 aa21.14■□□□□ 0.97
PRPF40A-209ENST00000486100 CTAGE1Q96RT6 745 aa21.14■□□□□ 0.97
PRPF40A-209ENST00000486100 C16orf70Q9BSU1 422 aa21.14■□□□□ 0.97
PRPF40A-209ENST00000486100 TTYH1Q9H313 450 aaPredicted RBP21.14■□□□□ 0.97
PRPF40A-209ENST00000486100 CXXC1Q9P0U4 656 aaPredicted RBP21.14■□□□□ 0.97
PRPF40A-209ENST00000486100 NAP1L2Q9ULW6 460 aaPredicted RBP21.14■□□□□ 0.97
PRPF40A-209ENST00000486100 PCDHA6Q9UN73 950 aa21.14■□□□□ 0.97
PRPF40A-209ENST00000486100 PCDHA8Q9Y5H6 950 aa21.14■□□□□ 0.97
PRPF40A-209ENST00000486100 CCDC196A0A1B0GTZ2 297 aa21.13■□□□□ 0.97
PRPF40A-209ENST00000486100 hCG_1984214I3L0E3 225 aa21.13■□□□□ 0.97
PRPF40A-209ENST00000486100 RPS6KB1P23443 525 aa21.13■□□□□ 0.97
PRPF40A-209ENST00000486100 ADD1P35611 737 aaKnown RBP21.13■□□□□ 0.97
PRPF40A-209ENST00000486100 METAP2P50579 478 aaKnown RBP eCLIP21.13■□□□□ 0.97
PRPF40A-209ENST00000486100 CCDC155Q8N6L0 562 aa21.13■□□□□ 0.97
PRPF40A-209ENST00000486100 ZNF713Q8N859 430 aaPredicted RBP21.13■□□□□ 0.97
PRPF40A-209ENST00000486100 CAGE1Q8TC20 777 aa21.13■□□□□ 0.97
PRPF40A-209ENST00000486100 GPRASP2Q96D09 838 aa21.13■□□□□ 0.97
PRPF40A-209ENST00000486100 GRXCR1A8MXD5 290 aa21.12■□□□□ 0.97
PRPF40A-209ENST00000486100 NOP56O00567 594 aaKnown RBP21.12■□□□□ 0.97
PRPF40A-209ENST00000486100 DNAJB2P25686 324 aa21.12■□□□□ 0.97
PRPF40A-209ENST00000486100 NAPAP54920 295 aa21.12■□□□□ 0.97
PRPF40A-209ENST00000486100 TYW1BQ6NUM6 668 aa21.12■□□□□ 0.97
PRPF40A-209ENST00000486100 PPP1R18Q6NYC8 613 aa21.12■□□□□ 0.97
PRPF40A-209ENST00000486100 DEFB128Q7Z7B8 93 aa21.12■□□□□ 0.97
PRPF40A-209ENST00000486100 CDHR1Q96JP9 859 aa21.12■□□□□ 0.97
PRPF40A-209ENST00000486100 CDX2Q99626 313 aaPredicted RBP21.12■□□□□ 0.97
PRPF40A-209ENST00000486100 USP26Q9BXU7 913 aa21.12■□□□□ 0.97
PRPF40A-209ENST00000486100 AGXT2Q9BYV1 514 aa21.12■□□□□ 0.97
PRPF40A-209ENST00000486100 RIC8AQ9NPQ8 531 aa21.12■□□□□ 0.97
PRPF40A-209ENST00000486100 H3BRB1 525 aa21.11■□□□□ 0.97
PRPF40A-209ENST00000486100 ITGB5P18084 799 aa21.11■□□□□ 0.97
PRPF40A-209ENST00000486100 GIMAP8Q8ND71 665 aaPredicted RBP21.11■□□□□ 0.97
PRPF40A-209ENST00000486100 AFAP1L1Q8TED9 768 aa21.11■□□□□ 0.97
PRPF40A-209ENST00000486100 GPR20Q99678 358 aa21.11■□□□□ 0.97
PRPF40A-209ENST00000486100 PBX4Q9BYU1 374 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms