RNA–Protein interactions for RNA: ENST00000484546.1

CDK5RAP2-217, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 1,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-217ENST00000484546 TMEM260Q9NX78 707 aa13.4□□□□□ -0.26
CDK5RAP2-217ENST00000484546 ZMYND8Q9ULU4 1186 aaPredicted RBP13.4□□□□□ -0.26
CDK5RAP2-217ENST00000484546 ATP11BQ9Y2G3 1177 aa13.4□□□□□ -0.26
CDK5RAP2-217ENST00000484546 NOP56O00567 594 aaKnown RBP13.39□□□□□ -0.27
CDK5RAP2-217ENST00000484546 KPNA6O60684 536 aa13.39□□□□□ -0.27
CDK5RAP2-217ENST00000484546 LARGE1O95461 756 aa13.39□□□□□ -0.27
CDK5RAP2-217ENST00000484546 MTMR1Q13613 665 aa13.39□□□□□ -0.27
CDK5RAP2-217ENST00000484546 LAMC2Q13753 1193 aa13.39□□□□□ -0.27
CDK5RAP2-217ENST00000484546 NEDD9Q14511 834 aa13.39□□□□□ -0.27
CDK5RAP2-217ENST00000484546 C1orf53Q5VUE5 145 aa13.39□□□□□ -0.27
CDK5RAP2-217ENST00000484546 GALNT17Q6IS24 598 aa13.39□□□□□ -0.27
CDK5RAP2-217ENST00000484546 CCDC62Q6P9F0 684 aa13.39□□□□□ -0.27
CDK5RAP2-217ENST00000484546 CXCL17Q6UXB2 119 aa13.39□□□□□ -0.27
CDK5RAP2-217ENST00000484546 CCDC83Q8IWF9 413 aa13.39□□□□□ -0.27
CDK5RAP2-217ENST00000484546 FAM177A1Q8N128 213 aaPredicted RBP13.39□□□□□ -0.27
CDK5RAP2-217ENST00000484546 GIMAP8Q8ND71 665 aaPredicted RBP13.39□□□□□ -0.27
CDK5RAP2-217ENST00000484546 COPS5Q92905 334 aa13.39□□□□□ -0.27
CDK5RAP2-217ENST00000484546 KIF2CQ99661 725 aa13.39□□□□□ -0.27
CDK5RAP2-217ENST00000484546 ALG1Q9BT22 464 aa13.39□□□□□ -0.27
CDK5RAP2-217ENST00000484546 DDX41Q9UJV9 622 aaKnown RBP13.39□□□□□ -0.27
CDK5RAP2-217ENST00000484546 PCDHA4Q9UN74 947 aa13.39□□□□□ -0.27
CDK5RAP2-217ENST00000484546 LTBP2Q14767 1821 aa13.39□□□□□ -0.27
CDK5RAP2-217ENST00000484546 ELP1O95163 1332 aa13.39□□□□□ -0.27
CDK5RAP2-217ENST00000484546 MROH7Q68CQ1 1323 aa13.39□□□□□ -0.27
CDK5RAP2-217ENST00000484546 A0A0U1RQG5 324 aaPredicted RBP13.38□□□□□ -0.27
CDK5RAP2-217ENST00000484546 SORBS3O60504 671 aa13.38□□□□□ -0.27
CDK5RAP2-217ENST00000484546 RGS20O76081 388 aa13.38□□□□□ -0.27
CDK5RAP2-217ENST00000484546 GGPS1O95749 300 aa13.38□□□□□ -0.27
CDK5RAP2-217ENST00000484546 SYN1P17600 705 aa13.38□□□□□ -0.27
CDK5RAP2-217ENST00000484546 MCM2P49736 904 aa13.38□□□□□ -0.27
CDK5RAP2-217ENST00000484546 CHMP4BP1P59074 171 aa13.38□□□□□ -0.27
CDK5RAP2-217ENST00000484546 MRPS9P82933 396 aaKnown RBP13.38□□□□□ -0.27
CDK5RAP2-217ENST00000484546 FAM184AQ8NB25 1140 aa13.38□□□□□ -0.27
CDK5RAP2-217ENST00000484546 GPRASP2Q96D09 838 aa13.38□□□□□ -0.27
CDK5RAP2-217ENST00000484546 SPATA33Q96N06 139 aa13.38□□□□□ -0.27
CDK5RAP2-217ENST00000484546 INPP4AQ96PE3 977 aaPredicted RBP13.38□□□□□ -0.27
CDK5RAP2-217ENST00000484546 PCDH10Q9P2E7 1040 aa13.38□□□□□ -0.27
CDK5RAP2-217ENST00000484546 PQBP1O60828 265 aaKnown RBP13.37□□□□□ -0.27
CDK5RAP2-217ENST00000484546 UBA1P22314 1058 aaKnown RBP13.37□□□□□ -0.27
CDK5RAP2-217ENST00000484546 ICAM3P32942 547 aa13.37□□□□□ -0.27
CDK5RAP2-217ENST00000484546 SREBF1P36956 1147 aa13.37□□□□□ -0.27
CDK5RAP2-217ENST00000484546 CLK2P49760 499 aaKnown RBP13.37□□□□□ -0.27
CDK5RAP2-217ENST00000484546 ARHGAP4P98171 946 aa13.37□□□□□ -0.27
CDK5RAP2-217ENST00000484546 ARHGAP1Q07960 439 aa13.37□□□□□ -0.27
CDK5RAP2-217ENST00000484546 DGKDQ16760 1214 aa13.37□□□□□ -0.27
CDK5RAP2-217ENST00000484546 CELF3Q5SZQ8 465 aaKnown RBP13.37□□□□□ -0.27
CDK5RAP2-217ENST00000484546 CHRDL2Q6WN34 429 aa13.37□□□□□ -0.27
CDK5RAP2-217ENST00000484546 BLIDQ8IZY5 108 aa13.37□□□□□ -0.27
CDK5RAP2-217ENST00000484546 RASGRP4Q8TDF6 673 aa13.37□□□□□ -0.27
CDK5RAP2-217ENST00000484546 AFG1LQ8WV93 481 aa13.37□□□□□ -0.27
CDK5RAP2-217ENST00000484546 AIFM3Q96NN9 605 aa13.37□□□□□ -0.27
CDK5RAP2-217ENST00000484546 MTG1Q9BT17 334 aaPredicted RBP13.37□□□□□ -0.27
CDK5RAP2-217ENST00000484546 PRDM5Q9NQX1 630 aaPredicted RBP13.37□□□□□ -0.27
CDK5RAP2-217ENST00000484546 PKD2L1Q9P0L9 805 aa13.37□□□□□ -0.27
CDK5RAP2-217ENST00000484546 TCEAL9Q9UHQ7 104 aa13.37□□□□□ -0.27
CDK5RAP2-217ENST00000484546 KIF3AQ9Y496 699 aa13.37□□□□□ -0.27
CDK5RAP2-217ENST00000484546 CCDC194A0A1B0GVG4 234 aa13.36□□□□□ -0.27
CDK5RAP2-217ENST00000484546 A6NJR5 290 aa13.36□□□□□ -0.27
CDK5RAP2-217ENST00000484546 DCDC2CA8MYV0 355 aa13.36□□□□□ -0.27
CDK5RAP2-217ENST00000484546 SPATA31C2B4DYI2 1134 aa13.36□□□□□ -0.27
CDK5RAP2-217ENST00000484546 TLR3O15455 904 aaKnown RBP13.36□□□□□ -0.27
CDK5RAP2-217ENST00000484546 MAFGO15525 162 aa13.36□□□□□ -0.27
CDK5RAP2-217ENST00000484546 CTDNEP1O95476 244 aa13.36□□□□□ -0.27
CDK5RAP2-217ENST00000484546 MMP3P08254 477 aa13.36□□□□□ -0.27
CDK5RAP2-217ENST00000484546 FOSBP53539 338 aa13.36□□□□□ -0.27
CDK5RAP2-217ENST00000484546 HMGN5P82970 282 aaKnown RBP13.36□□□□□ -0.27
CDK5RAP2-217ENST00000484546 SP4Q02446 784 aa13.36□□□□□ -0.27
CDK5RAP2-217ENST00000484546 TLE2Q04725 743 aa13.36□□□□□ -0.27
CDK5RAP2-217ENST00000484546 FAM47CQ5HY64 1035 aa13.36□□□□□ -0.27
CDK5RAP2-217ENST00000484546 NSUN7Q8NE18 718 aaKnown RBP13.36□□□□□ -0.27
CDK5RAP2-217ENST00000484546 PPTC7Q8NI37 304 aa13.36□□□□□ -0.27
CDK5RAP2-217ENST00000484546 EMID1Q96A84 441 aaPredicted RBP13.36□□□□□ -0.27
CDK5RAP2-217ENST00000484546 MXRA8Q9BRK3 442 aa13.36□□□□□ -0.27
CDK5RAP2-217ENST00000484546 SDF4Q9BRK5 362 aa13.36□□□□□ -0.27
CDK5RAP2-217ENST00000484546 LLPHQ9BRT6 129 aaKnown RBP13.36□□□□□ -0.27
CDK5RAP2-217ENST00000484546 KATNAL1Q9BW62 490 aa13.36□□□□□ -0.27
CDK5RAP2-217ENST00000484546 JADE2Q9NQC1 790 aa13.36□□□□□ -0.27
CDK5RAP2-217ENST00000484546 PDLIM7Q9NR12 457 aa13.36□□□□□ -0.27
CDK5RAP2-217ENST00000484546 KCNJ14Q9UNX9 436 aa13.36□□□□□ -0.27
CDK5RAP2-217ENST00000484546 UBIAD1Q9Y5Z9 338 aa13.36□□□□□ -0.27
CDK5RAP2-217ENST00000484546 DNAH12Q6ZR08 3092 aa13.36□□□□□ -0.27
CDK5RAP2-217ENST00000484546 SCN10AQ9Y5Y9 1956 aa13.35□□□□□ -0.27
CDK5RAP2-217ENST00000484546 JAK2O60674 1132 aa13.35□□□□□ -0.27
CDK5RAP2-217ENST00000484546 KRT2P35908 639 aa13.35□□□□□ -0.27
CDK5RAP2-217ENST00000484546 PURAQ00577 322 aaKnown RBP13.35□□□□□ -0.27
CDK5RAP2-217ENST00000484546 SETQ01105 290 aaPredicted RBP13.35□□□□□ -0.27
CDK5RAP2-217ENST00000484546 ITGA7Q13683 1181 aa13.35□□□□□ -0.27
CDK5RAP2-217ENST00000484546 SAFBQ15424 915 aaKnown RBP eCLIP13.35□□□□□ -0.27
CDK5RAP2-217ENST00000484546 CEP55Q53EZ4 464 aa13.35□□□□□ -0.27
CDK5RAP2-217ENST00000484546 MYSM1Q5VVJ2 828 aa13.35□□□□□ -0.27
CDK5RAP2-217ENST00000484546 METTL7BQ6UX53 244 aa13.35□□□□□ -0.27
CDK5RAP2-217ENST00000484546 CYFIP1Q7L576 1253 aa13.35□□□□□ -0.27
CDK5RAP2-217ENST00000484546 ANKRD33Q7Z3H0 272 aa13.35□□□□□ -0.27
CDK5RAP2-217ENST00000484546 KRT25Q7Z3Z0 450 aa13.35□□□□□ -0.27
CDK5RAP2-217ENST00000484546 DAGLBQ8NCG7 672 aa13.35□□□□□ -0.27
CDK5RAP2-217ENST00000484546 SENP7Q9BQF6 1050 aa13.35□□□□□ -0.27
CDK5RAP2-217ENST00000484546 SEZ6LQ9BYH1 1024 aa13.35□□□□□ -0.27
CDK5RAP2-217ENST00000484546 PRO3102Q9H379 93 aa13.35□□□□□ -0.27
CDK5RAP2-217ENST00000484546 COLQQ9Y215 455 aaPredicted RBP13.35□□□□□ -0.27
CDK5RAP2-217ENST00000484546 ARVCFO00192 962 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms