RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 MCM2P49736 904 aa11.03□□□□□ -0.64
HMG20B-210ENST00000483417 MRPL12P52815 198 aaKnown RBP11.03□□□□□ -0.64
HMG20B-210ENST00000483417 PSMC6P62333 389 aa11.03□□□□□ -0.64
HMG20B-210ENST00000483417 FPGSQ05932 587 aa11.03□□□□□ -0.64
HMG20B-210ENST00000483417 NPY5RQ15761 445 aa11.03□□□□□ -0.64
HMG20B-210ENST00000483417 UBE2SQ16763 222 aa11.03□□□□□ -0.64
HMG20B-210ENST00000483417 RASIP1Q5U651 963 aa11.03□□□□□ -0.64
HMG20B-210ENST00000483417 SAMD3Q8N6K7 520 aa11.03□□□□□ -0.64
HMG20B-210ENST00000483417 VWCEQ96DN2 955 aa11.03□□□□□ -0.64
HMG20B-210ENST00000483417 RMDN3Q96TC7 470 aa11.03□□□□□ -0.64
HMG20B-210ENST00000483417 MPHOSPH6Q99547 160 aaKnown RBP11.03□□□□□ -0.64
HMG20B-210ENST00000483417 TRPV6Q9H1D0 765 aa11.03□□□□□ -0.64
HMG20B-210ENST00000483417 BARHL2Q9NY43 387 aa11.03□□□□□ -0.64
HMG20B-210ENST00000483417 SEC63Q9UGP8 760 aaKnown RBP11.03□□□□□ -0.64
HMG20B-210ENST00000483417 MYH6P13533 1939 aa11.03□□□□□ -0.64
HMG20B-210ENST00000483417 TLR3O15455 904 aaKnown RBP11.02□□□□□ -0.65
HMG20B-210ENST00000483417 B4GALT4O60513 344 aa11.02□□□□□ -0.65
HMG20B-210ENST00000483417 KPNA6O60684 536 aa11.02□□□□□ -0.65
HMG20B-210ENST00000483417 EIF3JO75822 258 aaKnown RBP11.02□□□□□ -0.65
HMG20B-210ENST00000483417 DEXIO95424 95 aa11.02□□□□□ -0.65
HMG20B-210ENST00000483417 CPT1AP50416 773 aa11.02□□□□□ -0.65
HMG20B-210ENST00000483417 SMAD3P84022 425 aaKnown RBP11.02□□□□□ -0.65
HMG20B-210ENST00000483417 AKAP17AQ02040 695 aaKnown RBP11.02□□□□□ -0.65
HMG20B-210ENST00000483417 GUCY1B3Q02153 619 aa11.02□□□□□ -0.65
HMG20B-210ENST00000483417 ARHGAP1Q07960 439 aa11.02□□□□□ -0.65
HMG20B-210ENST00000483417 STXBP2Q15833 593 aa11.02□□□□□ -0.65
HMG20B-210ENST00000483417 TMEM240Q5SV17 173 aa11.02□□□□□ -0.65
HMG20B-210ENST00000483417 FCHSD1Q86WN1 690 aa11.02□□□□□ -0.65
HMG20B-210ENST00000483417 OR6J1Q8NGC5 347 aa11.02□□□□□ -0.65
HMG20B-210ENST00000483417 RASGRP4Q8TDF6 673 aa11.02□□□□□ -0.65
HMG20B-210ENST00000483417 OXER1Q8TDS5 423 aa11.02□□□□□ -0.65
HMG20B-210ENST00000483417 PGBD1Q96JS3 809 aa11.02□□□□□ -0.65
HMG20B-210ENST00000483417 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.02□□□□□ -0.65
HMG20B-210ENST00000483417 MTG1Q9BT17 334 aaPredicted RBP11.02□□□□□ -0.65
HMG20B-210ENST00000483417 ALG1Q9BT22 464 aa11.02□□□□□ -0.65
HMG20B-210ENST00000483417 PSTPIP2Q9H939 334 aa11.02□□□□□ -0.65
HMG20B-210ENST00000483417 PXMP2Q9NR77 195 aa11.02□□□□□ -0.65
HMG20B-210ENST00000483417 TSHZ2Q9NRE2 1034 aa11.02□□□□□ -0.65
HMG20B-210ENST00000483417 POLR3EQ9NVU0 708 aa11.02□□□□□ -0.65
HMG20B-210ENST00000483417 DDX41Q9UJV9 622 aaKnown RBP11.02□□□□□ -0.65
HMG20B-210ENST00000483417 STXBP5LQ9Y2K9 1186 aa11.02□□□□□ -0.65
HMG20B-210ENST00000483417 K7ELQ4 463 aaPredicted RBP11.01□□□□□ -0.65
HMG20B-210ENST00000483417 RGS20O76081 388 aa11.01□□□□□ -0.65
HMG20B-210ENST00000483417 NR3C2P08235 984 aa11.01□□□□□ -0.65
HMG20B-210ENST00000483417 CSF2RAP15509 400 aa11.01□□□□□ -0.65
HMG20B-210ENST00000483417 GJB2P29033 226 aa11.01□□□□□ -0.65
HMG20B-210ENST00000483417 CYP2C18P33260 490 aa11.01□□□□□ -0.65
HMG20B-210ENST00000483417 NAPAP54920 295 aa11.01□□□□□ -0.65
HMG20B-210ENST00000483417 TTLL4Q14679 1199 aa11.01□□□□□ -0.65
HMG20B-210ENST00000483417 LY6KQ17RY6 165 aa11.01□□□□□ -0.65
HMG20B-210ENST00000483417 JAKMIP3Q5VZ66 844 aa11.01□□□□□ -0.65
HMG20B-210ENST00000483417 CPLX2Q6PUV4 134 aaKnown RBP11.01□□□□□ -0.65
HMG20B-210ENST00000483417 VSIG10LQ86VR7 867 aa11.01□□□□□ -0.65
HMG20B-210ENST00000483417 TRIM22Q8IYM9 498 aa11.01□□□□□ -0.65
HMG20B-210ENST00000483417 GUCD1Q96NT3 240 aa11.01□□□□□ -0.65
HMG20B-210ENST00000483417 PDCD2LQ9BRP1 358 aa11.01□□□□□ -0.65
HMG20B-210ENST00000483417 LLPHQ9BRT6 129 aaKnown RBP11.01□□□□□ -0.65
HMG20B-210ENST00000483417 NOC4LQ9BVI4 516 aaKnown RBP11.01□□□□□ -0.65
HMG20B-210ENST00000483417 PPP1R12CQ9BZL4 782 aa11.01□□□□□ -0.65
HMG20B-210ENST00000483417 SEMA6BQ9H3T3 888 aa11.01□□□□□ -0.65
HMG20B-210ENST00000483417 UMODL1Q5DID0 1318 aa11.01□□□□□ -0.65
HMG20B-210ENST00000483417 LAMA2P24043 3122 aaKnown RBP11.01□□□□□ -0.65
HMG20B-210ENST00000483417 GCOM1H8Y6P7 765 aaPredicted RBP11□□□□□ -0.65
HMG20B-210ENST00000483417 M0R2N6 131 aa11□□□□□ -0.65
HMG20B-210ENST00000483417 CDKL5O76039 1030 aa11□□□□□ -0.65
HMG20B-210ENST00000483417 MYL3P08590 195 aa11□□□□□ -0.65
HMG20B-210ENST00000483417 POLR2MP0CAP2 368 aa11□□□□□ -0.65
HMG20B-210ENST00000483417 EIF2AK2P19525 551 aaKnown RBP11□□□□□ -0.65
HMG20B-210ENST00000483417 NLRP5P59047 1200 aa11□□□□□ -0.65
HMG20B-210ENST00000483417 TRAF1Q13077 416 aa11□□□□□ -0.65
HMG20B-210ENST00000483417 PPIGQ13427 754 aaKnown RBP eCLIP11□□□□□ -0.653e-8■■■□□ 15.4
HMG20B-210ENST00000483417 NBPF20Q3BBV1 942 aa11□□□□□ -0.65
HMG20B-210ENST00000483417 EARS2Q5JPH6 523 aaKnown RBP11□□□□□ -0.65
HMG20B-210ENST00000483417 ARHGEF16Q5VV41 709 aa11□□□□□ -0.65
HMG20B-210ENST00000483417 SEPT14Q6ZU15 432 aa11□□□□□ -0.65
HMG20B-210ENST00000483417 TMEM199Q8N511 208 aa11□□□□□ -0.65
HMG20B-210ENST00000483417 IL27Q8NEV9 243 aa11□□□□□ -0.65
HMG20B-210ENST00000483417 IL31RAQ8NI17 732 aa11□□□□□ -0.65
HMG20B-210ENST00000483417 AFG1LQ8WV93 481 aa11□□□□□ -0.65
HMG20B-210ENST00000483417 KAT2BQ92831 832 aa11□□□□□ -0.65
HMG20B-210ENST00000483417 EMID1Q96A84 441 aaPredicted RBP11□□□□□ -0.65
HMG20B-210ENST00000483417 RNPC3Q96LT9 517 aaKnown RBP11□□□□□ -0.65
HMG20B-210ENST00000483417 PHF20Q9BVI0 1012 aa11□□□□□ -0.65
HMG20B-210ENST00000483417 ZMYND12Q9H0C1 365 aa11□□□□□ -0.65
HMG20B-210ENST00000483417 WNT8AQ9H1J5 351 aa11□□□□□ -0.65
HMG20B-210ENST00000483417 TTYH1Q9H313 450 aaPredicted RBP11□□□□□ -0.65
HMG20B-210ENST00000483417 RIC8AQ9NPQ8 531 aa11□□□□□ -0.65
HMG20B-210ENST00000483417 COL6A3P12111 3177 aa10.99□□□□□ -0.65
HMG20B-210ENST00000483417 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.99□□□□□ -0.65
HMG20B-210ENST00000483417 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.99□□□□□ -0.65
HMG20B-210ENST00000483417 FAM205CA6NFA0 338 aa10.99□□□□□ -0.65
HMG20B-210ENST00000483417 GH1P01241 217 aa10.99□□□□□ -0.65
HMG20B-210ENST00000483417 ACRP10323 421 aa10.99□□□□□ -0.65
HMG20B-210ENST00000483417 CLK2P49760 499 aaKnown RBP10.99□□□□□ -0.65
HMG20B-210ENST00000483417 PTPN11Q06124 597 aaPredicted RBP10.99□□□□□ -0.65
HMG20B-210ENST00000483417 PGM5Q15124 567 aa10.99□□□□□ -0.65
HMG20B-210ENST00000483417 KRT40Q6A162 431 aa10.99□□□□□ -0.65
HMG20B-210ENST00000483417 NFRKBQ6P4R8 1299 aa10.99□□□□□ -0.65
HMG20B-210ENST00000483417 ZNF365Q70YC5 407 aa10.99□□□□□ -0.65
HMG20B-210ENST00000483417 CTAGE1Q96RT6 745 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms