RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-233ENST00000482563 ZNF652Q9Y2D9 606 aa8.66□□□□□ -1.02
RBM39-233ENST00000482563 HIF3AQ9Y2N7 669 aa8.66□□□□□ -1.02
RBM39-233ENST00000482563 RRN3P2A6NIE6 340 aa8.65□□□□□ -1.03
RBM39-233ENST00000482563 GFPT2O94808 682 aa8.65□□□□□ -1.03
RBM39-233ENST00000482563 CNOT4O95628 575 aaKnown RBP8.65□□□□□ -1.03
RBM39-233ENST00000482563 TNFSF4P23510 183 aa8.65□□□□□ -1.03
RBM39-233ENST00000482563 PEX2P28328 305 aa8.65□□□□□ -1.03
RBM39-233ENST00000482563 AFF1P51825 1210 aaKnown RBP8.65□□□□□ -1.03
RBM39-233ENST00000482563 GSTM4Q03013 218 aa8.65□□□□□ -1.03
RBM39-233ENST00000482563 ZC3H12AQ5D1E8 599 aaKnown RBP8.65□□□□□ -1.03
RBM39-233ENST00000482563 EFHC2Q5JST6 749 aa8.65□□□□□ -1.03
RBM39-233ENST00000482563 OVCH1Q7RTY7 1134 aa8.65□□□□□ -1.03
RBM39-233ENST00000482563 ZC3H7AQ8IWR0 971 aaKnown RBP8.65□□□□□ -1.03
RBM39-233ENST00000482563 CCDC74BQ96LY2 380 aa8.65□□□□□ -1.03
RBM39-233ENST00000482563 CCDC140Q96MF4 163 aa8.65□□□□□ -1.03
RBM39-233ENST00000482563 LRFN3Q9BTN0 628 aa8.65□□□□□ -1.03
RBM39-233ENST00000482563 PKD2L1Q9P0L9 805 aa8.65□□□□□ -1.03
RBM39-233ENST00000482563 ITIH6Q6UXX5 1313 aa8.64□□□□□ -1.03
RBM39-233ENST00000482563 GOLGA8AA7E2F4 631 aa8.64□□□□□ -1.03
RBM39-233ENST00000482563 GOLGA8BA8MQT2 603 aa8.64□□□□□ -1.03
RBM39-233ENST00000482563 H3BML4 177 aa8.64□□□□□ -1.03
RBM39-233ENST00000482563 ARNTLO00327 626 aa8.64□□□□□ -1.03
RBM39-233ENST00000482563 B3GALT2O43825 422 aa8.64□□□□□ -1.03
RBM39-233ENST00000482563 SRGAP2CP0DJJ0 459 aa8.64□□□□□ -1.03
RBM39-233ENST00000482563 ADD2P35612 726 aa8.64□□□□□ -1.03
RBM39-233ENST00000482563 KCNC4Q03721 635 aa8.64□□□□□ -1.03
RBM39-233ENST00000482563 DARS2Q6PI48 645 aaKnown RBP8.64□□□□□ -1.03
RBM39-233ENST00000482563 PDZD4Q76G19 769 aaPredicted RBP8.64□□□□□ -1.03
RBM39-233ENST00000482563 MRPL41Q8IXM3 137 aaKnown RBP8.64□□□□□ -1.03
RBM39-233ENST00000482563 EFHBQ8N7U6 833 aa8.64□□□□□ -1.03
RBM39-233ENST00000482563 SNIP1Q8TAD8 396 aaKnown RBP8.64□□□□□ -1.03
RBM39-233ENST00000482563 PPP1R16BQ96T49 567 aa8.64□□□□□ -1.03
RBM39-233ENST00000482563 GAS2L1Q99501 681 aaPredicted RBP8.64□□□□□ -1.03
RBM39-233ENST00000482563 RETREG1Q9H6L5 497 aa8.64□□□□□ -1.03
RBM39-233ENST00000482563 KMT5AQ9NQR1 393 aa8.64□□□□□ -1.03
RBM39-233ENST00000482563 ITM2CQ9NQX7 267 aa8.64□□□□□ -1.03
RBM39-233ENST00000482563 AFG3L2Q9Y4W6 797 aa8.64□□□□□ -1.03
RBM39-233ENST00000482563 PCDHGC5Q9Y5F6 944 aa8.64□□□□□ -1.03
RBM39-233ENST00000482563 PCDHA11Q9Y5I1 949 aa8.64□□□□□ -1.03
RBM39-233ENST00000482563 LCHNA4D1U4 455 aa8.63□□□□□ -1.03
RBM39-233ENST00000482563 GLULP15104 373 aa8.63□□□□□ -1.03
RBM39-233ENST00000482563 CD33P20138 364 aa8.63□□□□□ -1.03
RBM39-233ENST00000482563 GBP1P32455 592 aa8.63□□□□□ -1.03
RBM39-233ENST00000482563 ZNF445P59923 1031 aa8.63□□□□□ -1.03
RBM39-233ENST00000482563 CCDC38Q502W7 563 aa8.63□□□□□ -1.03
RBM39-233ENST00000482563 TTLL5Q6EMB2 1281 aa8.63□□□□□ -1.03
RBM39-233ENST00000482563 DPP9Q86TI2 863 aa8.63□□□□□ -1.03
RBM39-233ENST00000482563 C7orf61Q8IZ16 206 aa8.63□□□□□ -1.03
RBM39-233ENST00000482563 NKAIN3Q8N8D7 197 aa8.63□□□□□ -1.03
RBM39-233ENST00000482563 TGFBRAP1Q8WUH2 860 aa8.63□□□□□ -1.03
RBM39-233ENST00000482563 RPGRQ92834 1020 aaKnown RBP8.63□□□□□ -1.03
RBM39-233ENST00000482563 MAP3K14Q99558 947 aa8.63□□□□□ -1.03
RBM39-233ENST00000482563 PHF20Q9BVI0 1012 aa8.63□□□□□ -1.03
RBM39-233ENST00000482563 VPS45Q9NRW7 570 aa8.63□□□□□ -1.03
RBM39-233ENST00000482563 TBC1D22BQ9NU19 505 aa8.63□□□□□ -1.03
RBM39-233ENST00000482563 NDFIP2Q9NV92 336 aa8.63□□□□□ -1.03
RBM39-233ENST00000482563 DNAJB12Q9NXW2 375 aaKnown RBP8.63□□□□□ -1.03
RBM39-233ENST00000482563 GOLIM4O00461 696 aa8.63□□□□□ -1.03
RBM39-233ENST00000482563 KPNA5O15131 536 aa8.63□□□□□ -1.03
RBM39-233ENST00000482563 BNIP3LO60238 219 aa8.63□□□□□ -1.03
RBM39-233ENST00000482563 BAIAP3O94812 1187 aa8.63□□□□□ -1.03
RBM39-233ENST00000482563 UBXN7O94888 489 aa8.63□□□□□ -1.03
RBM39-233ENST00000482563 NTF4P34130 210 aa8.63□□□□□ -1.03
RBM39-233ENST00000482563 CASP5P51878 434 aa8.63□□□□□ -1.03
RBM39-233ENST00000482563 ADKP55263 362 aaKnown RBP8.63□□□□□ -1.03
RBM39-233ENST00000482563 AUHQ13825 339 aaKnown RBP8.63□□□□□ -1.03
RBM39-233ENST00000482563 CDC37Q16543 378 aaPredicted RBP8.63□□□□□ -1.03
RBM39-233ENST00000482563 NKG7Q16617 165 aa8.63□□□□□ -1.03
RBM39-233ENST00000482563 KIF4BQ2VIQ3 1234 aa8.63□□□□□ -1.03
RBM39-233ENST00000482563 PRR16Q569H4 304 aa8.63□□□□□ -1.03
RBM39-233ENST00000482563 PPM1JQ5JR12 505 aa8.63□□□□□ -1.03
RBM39-233ENST00000482563 FIGNL1Q6PIW4 674 aa8.63□□□□□ -1.03
RBM39-233ENST00000482563 GALNT5Q7Z7M9 940 aa8.63□□□□□ -1.03
RBM39-233ENST00000482563 ANKRD18AQ8IVF6 992 aa8.63□□□□□ -1.03
RBM39-233ENST00000482563 CRACR2BQ8N4Y2 399 aaPredicted RBP8.63□□□□□ -1.03
RBM39-233ENST00000482563 ZBTB10Q96DT7 871 aa8.63□□□□□ -1.03
RBM39-233ENST00000482563 DDX11Q96FC9 970 aa8.63□□□□□ -1.03
RBM39-233ENST00000482563 ORAI2Q96SN7 254 aa8.63□□□□□ -1.03
RBM39-233ENST00000482563 MKRN2Q9H000 416 aaKnown RBP8.63□□□□□ -1.03
RBM39-233ENST00000482563 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.63□□□□□ -1.03
RBM39-233ENST00000482563 IGFLR1Q9H665 355 aa8.63□□□□□ -1.03
RBM39-233ENST00000482563 PRKRIP1Q9H875 184 aaPredicted RBP8.63□□□□□ -1.03
RBM39-233ENST00000482563 CERS4Q9HA82 394 aa8.63□□□□□ -1.03
RBM39-233ENST00000482563 SH3GLB2Q9NR46 395 aa8.63□□□□□ -1.03
RBM39-233ENST00000482563 AREL1O15033 823 aa8.62□□□□□ -1.03
RBM39-233ENST00000482563 DHX16O60231 1041 aaKnown RBP8.62□□□□□ -1.03
RBM39-233ENST00000482563 MSCO60682 206 aa8.62□□□□□ -1.03
RBM39-233ENST00000482563 TMCC2O75069 709 aa8.62□□□□□ -1.03
RBM39-233ENST00000482563 VEGFAP15692 232 aaPredicted RBP8.62□□□□□ -1.03
RBM39-233ENST00000482563 MAOBP27338 520 aa8.62□□□□□ -1.03
RBM39-233ENST00000482563 SMARCA1P28370 1054 aa8.62□□□□□ -1.03
RBM39-233ENST00000482563 PRKG2Q13237 762 aa8.62□□□□□ -1.03
RBM39-233ENST00000482563 RNF220Q5VTB9 566 aa8.62□□□□□ -1.03
RBM39-233ENST00000482563 FAAH2Q6GMR7 532 aa8.62□□□□□ -1.03
RBM39-233ENST00000482563 NPNTQ6UXI9 565 aa8.62□□□□□ -1.03
RBM39-233ENST00000482563 DENND1CQ8IV53 801 aa8.62□□□□□ -1.03
RBM39-233ENST00000482563 MIER2Q8N344 545 aa8.62□□□□□ -1.03
RBM39-233ENST00000482563 MVB12AQ96EY5 273 aa8.62□□□□□ -1.03
RBM39-233ENST00000482563 USP26Q9BXU7 913 aa8.62□□□□□ -1.03
RBM39-233ENST00000482563 SOX17Q9H6I2 414 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms