RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 WHRNQ9P202 907 aa3.53□□□□□ -1.84
USH2A-204ENST00000481786 DIS3Q9Y2L1 958 aaKnown RBP3.53□□□□□ -1.84
USH2A-204ENST00000481786 SF3B6Q9Y3B4 125 aaKnown RBP3.53□□□□□ -1.84
USH2A-204ENST00000481786 PTPRKQ15262 1439 aa3.53□□□□□ -1.85
USH2A-204ENST00000481786 FRMPD1Q5SYB0 1578 aa3.52□□□□□ -1.85
USH2A-204ENST00000481786 SMAD7O15105 426 aaKnown RBP3.52□□□□□ -1.85
USH2A-204ENST00000481786 CYBBP04839 570 aa3.52□□□□□ -1.85
USH2A-204ENST00000481786 GSTM1P09488 218 aa3.52□□□□□ -1.85
USH2A-204ENST00000481786 FGRP09769 529 aa3.52□□□□□ -1.85
USH2A-204ENST00000481786 NCAM1P13591 858 aa3.52□□□□□ -1.85
USH2A-204ENST00000481786 IFNGR1P15260 489 aa3.52□□□□□ -1.85
USH2A-204ENST00000481786 PMLP29590 882 aa3.52□□□□□ -1.85
USH2A-204ENST00000481786 NOP2P46087 812 aaKnown RBP3.52□□□□□ -1.85
USH2A-204ENST00000481786 GNL2Q13823 731 aaKnown RBP3.52□□□□□ -1.85
USH2A-204ENST00000481786 PPP2R5DQ14738 602 aa3.52□□□□□ -1.85
USH2A-204ENST00000481786 RGL3Q3MIN7 710 aa3.52□□□□□ -1.85
USH2A-204ENST00000481786 BICRALQ6AI39 1079 aa3.52□□□□□ -1.85
USH2A-204ENST00000481786 IGFL4Q6B9Z1 124 aa3.52□□□□□ -1.85
USH2A-204ENST00000481786 KIAA1211LQ6NV74 962 aa3.52□□□□□ -1.85
USH2A-204ENST00000481786 VHLLQ6RSH7 139 aa3.52□□□□□ -1.85
USH2A-204ENST00000481786 USP51Q70EK9 711 aa3.52□□□□□ -1.85
USH2A-204ENST00000481786 ARHGEF39Q8N4T4 335 aa3.52□□□□□ -1.85
USH2A-204ENST00000481786 ADCY4Q8NFM4 1077 aa3.52□□□□□ -1.85
USH2A-204ENST00000481786 ZBTB8AQ96BR9 441 aa3.52□□□□□ -1.85
USH2A-204ENST00000481786 FGD4Q96M96 766 aa3.52□□□□□ -1.85
USH2A-204ENST00000481786 ZDHHC15Q96MV8 337 aa3.52□□□□□ -1.85
USH2A-204ENST00000481786 MCMBPQ9BTE3 642 aa3.52□□□□□ -1.85
USH2A-204ENST00000481786 GBP3Q9H0R5 595 aa3.52□□□□□ -1.85
USH2A-204ENST00000481786 NTMQ9P121 344 aa3.52□□□□□ -1.85
USH2A-204ENST00000481786 MRVI1Q9Y6F6 885 aa3.52□□□□□ -1.85
USH2A-204ENST00000481786 ARHGEF12Q9NZN5 1544 aa3.52□□□□□ -1.85
USH2A-204ENST00000481786 MAGI2Q86UL8 1455 aa3.52□□□□□ -1.85
USH2A-204ENST00000481786 FHOD3Q2V2M9 1422 aa3.52□□□□□ -1.85
USH2A-204ENST00000481786 KIAA0556O60303 1618 aa3.52□□□□□ -1.85
USH2A-204ENST00000481786 CPS1P31327 1500 aa3.51□□□□□ -1.85
USH2A-204ENST00000481786 DISP1Q96F81 1524 aa3.51□□□□□ -1.85
USH2A-204ENST00000481786 ANKRD34BA5PLL1 514 aa3.51□□□□□ -1.85
USH2A-204ENST00000481786 E9PSI1 815 aa3.51□□□□□ -1.85
USH2A-204ENST00000481786 FGF10O15520 208 aaPredicted RBP3.51□□□□□ -1.85
USH2A-204ENST00000481786 SRGAP3O43295 1099 aa3.51□□□□□ -1.85
USH2A-204ENST00000481786 PPM1BO75688 479 aa3.51□□□□□ -1.85
USH2A-204ENST00000481786 SSBP05455 408 aaKnown RBP eCLIP3.51□□□□□ -1.85
USH2A-204ENST00000481786 CD3EP07766 207 aa3.51□□□□□ -1.85
USH2A-204ENST00000481786 ETFBP38117 255 aa3.51□□□□□ -1.85
USH2A-204ENST00000481786 POU4F1Q01851 419 aa3.51□□□□□ -1.85
USH2A-204ENST00000481786 ARID5AQ03989 594 aa3.51□□□□□ -1.85
USH2A-204ENST00000481786 FHL2Q14192 279 aa3.51□□□□□ -1.85
USH2A-204ENST00000481786 NCAPHQ15003 741 aa3.51□□□□□ -1.85
USH2A-204ENST00000481786 SPDYAQ5MJ70 313 aa3.51□□□□□ -1.85
USH2A-204ENST00000481786 GLB1LQ6UWU2 654 aa3.51□□□□□ -1.85
USH2A-204ENST00000481786 ADAT2Q7Z6V5 191 aaKnown RBP3.51□□□□□ -1.85
USH2A-204ENST00000481786 MCF2L2Q86YR7 1114 aa3.51□□□□□ -1.85
USH2A-204ENST00000481786 SLC43A3Q8NBI5 491 aa3.51□□□□□ -1.85
USH2A-204ENST00000481786 ALG3Q92685 438 aa3.51□□□□□ -1.85
USH2A-204ENST00000481786 DDX11Q96FC9 970 aa3.51□□□□□ -1.85
USH2A-204ENST00000481786 RCC1LQ96I51 464 aaKnown RBP3.51□□□□□ -1.85
USH2A-204ENST00000481786 GMLQ99445 158 aa3.51□□□□□ -1.85
USH2A-204ENST00000481786 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.51□□□□□ -1.85
USH2A-204ENST00000481786 RNF38Q9H0F5 515 aa3.51□□□□□ -1.85
USH2A-204ENST00000481786 PPP4R1LQ9P1A2 415 aa3.51□□□□□ -1.85
USH2A-204ENST00000481786 APEX2Q9UBZ4 518 aa3.51□□□□□ -1.85
USH2A-204ENST00000481786 CGGBP1Q9UFW8 167 aaPredicted RBP3.51□□□□□ -1.85
USH2A-204ENST00000481786 PRKAG3Q9UGI9 489 aa3.51□□□□□ -1.85
USH2A-204ENST00000481786 DENND4BO75064 1496 aaPredicted RBP3.51□□□□□ -1.85
USH2A-204ENST00000481786 TRAPPC8Q9Y2L5 1435 aa3.51□□□□□ -1.85
USH2A-204ENST00000481786 EFCAB5A4FU69 1503 aa3.5□□□□□ -1.85
USH2A-204ENST00000481786 A0A1W2PQ27 194 aa3.5□□□□□ -1.85
USH2A-204ENST00000481786 A0A1W2PQ64 194 aa3.5□□□□□ -1.85
USH2A-204ENST00000481786 A0A1W2PQC6 194 aa3.5□□□□□ -1.85
USH2A-204ENST00000481786 A0A1W2PQD8 194 aa3.5□□□□□ -1.85
USH2A-204ENST00000481786 AURKAO14965 403 aa3.5□□□□□ -1.85
USH2A-204ENST00000481786 GPR42O15529 346 aa3.5□□□□□ -1.85
USH2A-204ENST00000481786 VAMP4O75379 141 aa3.5□□□□□ -1.85
USH2A-204ENST00000481786 GRB10Q13322 594 aa3.5□□□□□ -1.85
USH2A-204ENST00000481786 TNNI3KQ59H18 835 aa3.5□□□□□ -1.85
USH2A-204ENST00000481786 HLA-DQA1Q5Y7H0 255 aa3.5□□□□□ -1.85
USH2A-204ENST00000481786 MCTP2Q6DN12 878 aa3.5□□□□□ -1.85
USH2A-204ENST00000481786 RCSD1Q6JBY9 416 aa3.5□□□□□ -1.85
USH2A-204ENST00000481786 CYP2R1Q6VVX0 501 aa3.5□□□□□ -1.85
USH2A-204ENST00000481786 NAT16Q8N8M0 369 aa3.5□□□□□ -1.85
USH2A-204ENST00000481786 PTCHD1Q96NR3 888 aa3.5□□□□□ -1.85
USH2A-204ENST00000481786 WWC2-AS2Q96NR7 200 aa3.5□□□□□ -1.85
USH2A-204ENST00000481786 ZNF408Q9H9D4 720 aa3.5□□□□□ -1.85
USH2A-204ENST00000481786 ACTR10Q9NZ32 417 aa3.5□□□□□ -1.85
USH2A-204ENST00000481786 FER1L4A9Z1Z3 1794 aa3.5□□□□□ -1.85
USH2A-204ENST00000481786 ZMYM4Q5VZL5 1548 aa3.49□□□□□ -1.85
USH2A-204ENST00000481786 ZFYVE16Q7Z3T8 1539 aa3.49□□□□□ -1.85
USH2A-204ENST00000481786 PLA2R1Q13018 1463 aa3.49□□□□□ -1.85
USH2A-204ENST00000481786 CAMSAP1Q5T5Y3 1602 aa3.49□□□□□ -1.85
USH2A-204ENST00000481786 ABCA9Q8IUA7 1624 aa3.49□□□□□ -1.85
USH2A-204ENST00000481786 NPIPB8E9PQR5 432 aa3.49□□□□□ -1.85
USH2A-204ENST00000481786 DNAJA1P31689 397 aaKnown RBP3.49□□□□□ -1.85
USH2A-204ENST00000481786 ZNF143P52747 638 aaPredicted RBP3.49□□□□□ -1.85
USH2A-204ENST00000481786 R3HDM1Q15032 1099 aaKnown RBP3.49□□□□□ -1.85
USH2A-204ENST00000481786 SMN1Q16637 294 aaKnown RBP3.49□□□□□ -1.85
USH2A-204ENST00000481786 DPY19L1Q2PZI1 675 aa3.49□□□□□ -1.85
USH2A-204ENST00000481786 EEF1DP3Q658K8 133 aa3.49□□□□□ -1.85
USH2A-204ENST00000481786 C6orf15Q6UXA7 325 aaPredicted RBP3.49□□□□□ -1.85
USH2A-204ENST00000481786 STK32CQ86UX6 486 aa3.49□□□□□ -1.85
USH2A-204ENST00000481786 FAM178BQ8IXR5 827 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms