RNA–Protein interactions for RNA: ENST00000481456.1

DDX39B-219, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 5,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-219ENST00000481456 CXorf56Q9H5V9 222 aa12.58□□□□□ -0.4
DDX39B-219ENST00000481456 WDR17Q8IZU2 1322 aa12.58□□□□□ -0.4
DDX39B-219ENST00000481456 PLTPP55058 493 aa12.58□□□□□ -0.4
DDX39B-219ENST00000481456 TRIM68Q6AZZ1 485 aa12.58□□□□□ -0.4
DDX39B-219ENST00000481456 DDX17Q92841 729 aaKnown RBP12.58□□□□□ -0.4
DDX39B-219ENST00000481456 ISCA1Q9BUE6 129 aa12.58□□□□□ -0.4
DDX39B-219ENST00000481456 PPP1R12CQ9BZL4 782 aa12.58□□□□□ -0.4
DDX39B-219ENST00000481456 SH2D4AQ9H788 454 aa12.58□□□□□ -0.4
DDX39B-219ENST00000481456 OVOS2A0A0G2JMS6 1433 aa12.58□□□□□ -0.4
DDX39B-219ENST00000481456 EXOC3O60645 756 aa12.58□□□□□ -0.4
DDX39B-219ENST00000481456 TRMT1LQ7Z2T5 733 aaKnown RBP12.58□□□□□ -0.4
DDX39B-219ENST00000481456 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.58□□□□□ -0.43e-8■■■■□ 22.2
DDX39B-219ENST00000481456 HVCN1Q96D96 273 aa12.58□□□□□ -0.4
DDX39B-219ENST00000481456 ZMYND12Q9H0C1 365 aa12.58□□□□□ -0.4
DDX39B-219ENST00000481456 ADAMTS1Q9UHI8 967 aa12.58□□□□□ -0.4
DDX39B-219ENST00000481456 AXIN2Q9Y2T1 843 aa12.58□□□□□ -0.4
DDX39B-219ENST00000481456 HNRNPH1P31943 449 aaKnown RBP12.58□□□□□ -0.4
DDX39B-219ENST00000481456 MUM1Q2TAK8 710 aa12.58□□□□□ -0.4
DDX39B-219ENST00000481456 PPP4R3AQ6IN85 833 aa12.58□□□□□ -0.4
DDX39B-219ENST00000481456 GRK7Q8WTQ7 553 aa12.58□□□□□ -0.4
DDX39B-219ENST00000481456 KLHL29Q96CT2 875 aa12.58□□□□□ -0.4
DDX39B-219ENST00000481456 SENP2Q9HC62 589 aa12.58□□□□□ -0.4
DDX39B-219ENST00000481456 GEMIN8Q9NWZ8 242 aaKnown RBP12.58□□□□□ -0.4
DDX39B-219ENST00000481456 FAM205CA6NFA0 338 aa12.57□□□□□ -0.4
DDX39B-219ENST00000481456 AP1ARQ63HQ0 302 aa12.57□□□□□ -0.4
DDX39B-219ENST00000481456 CCDC13Q8IYE1 715 aa12.57□□□□□ -0.4
DDX39B-219ENST00000481456 ARHGAP24Q8N264 748 aa12.57□□□□□ -0.4
DDX39B-219ENST00000481456 PNPLA7Q6ZV29 1317 aa12.57□□□□□ -0.4
DDX39B-219ENST00000481456 F8W031 263 aaPredicted RBP12.57□□□□□ -0.4
DDX39B-219ENST00000481456 PEX19P40855 299 aa12.57□□□□□ -0.4
DDX39B-219ENST00000481456 SLFN12Q8IYM2 578 aa12.57□□□□□ -0.4
DDX39B-219ENST00000481456 PROM2Q8N271 834 aa12.57□□□□□ -0.4
DDX39B-219ENST00000481456 PDS5AQ29RF7 1337 aaKnown RBP12.57□□□□□ -0.4
DDX39B-219ENST00000481456 PLEKHG2Q9H7P9 1386 aa12.57□□□□□ -0.4
DDX39B-219ENST00000481456 hCG_1984214I3L0E3 225 aa12.57□□□□□ -0.4
DDX39B-219ENST00000481456 KRT15P19012 456 aa12.57□□□□□ -0.4
DDX39B-219ENST00000481456 DR1Q01658 176 aa12.57□□□□□ -0.4
DDX39B-219ENST00000481456 ACTN3Q08043 901 aaPredicted RBP12.57□□□□□ -0.4
DDX39B-219ENST00000481456 SLMAPQ14BN4 828 aa12.57□□□□□ -0.4
DDX39B-219ENST00000481456 KRT26Q7Z3Y9 468 aa12.57□□□□□ -0.4
DDX39B-219ENST00000481456 SH2D3CQ8N5H7 860 aa12.57□□□□□ -0.4
DDX39B-219ENST00000481456 ZNF713Q8N859 430 aaPredicted RBP12.57□□□□□ -0.4
DDX39B-219ENST00000481456 ZNF512BQ96KM6 892 aaPredicted RBP12.57□□□□□ -0.4
DDX39B-219ENST00000481456 CCT8L2Q96SF2 557 aa12.57□□□□□ -0.4
DDX39B-219ENST00000481456 TYW1Q9NV66 732 aaKnown RBP12.57□□□□□ -0.4
DDX39B-219ENST00000481456 MMEP08473 750 aa12.57□□□□□ -0.4
DDX39B-219ENST00000481456 KRT5P13647 590 aa12.57□□□□□ -0.4
DDX39B-219ENST00000481456 HSPA6P17066 643 aa12.57□□□□□ -0.4
DDX39B-219ENST00000481456 NT5C2P49902 561 aa12.57□□□□□ -0.4
DDX39B-219ENST00000481456 DDB1Q16531 1140 aa12.57□□□□□ -0.4
DDX39B-219ENST00000481456 C6orf118Q5T5N4 469 aa12.57□□□□□ -0.4
DDX39B-219ENST00000481456 CCDC62Q6P9F0 684 aa12.57□□□□□ -0.4
DDX39B-219ENST00000481456 UIMC1Q96RL1 719 aa12.57□□□□□ -0.4
DDX39B-219ENST00000481456 SEC31BQ9NQW1 1179 aa12.57□□□□□ -0.4
DDX39B-219ENST00000481456 AGPAT5Q9NUQ2 364 aa12.57□□□□□ -0.4
DDX39B-219ENST00000481456 CD44P16070 742 aaKnown RBP12.56□□□□□ -0.4
DDX39B-219ENST00000481456 LSP1P33241 339 aa12.56□□□□□ -0.4
DDX39B-219ENST00000481456 MAGOHP61326 146 aaKnown RBP12.56□□□□□ -0.4
DDX39B-219ENST00000481456 ADCY2Q08462 1091 aa12.56□□□□□ -0.4
DDX39B-219ENST00000481456 PPP2R5AQ15172 486 aa12.56□□□□□ -0.4
DDX39B-219ENST00000481456 NT5DC1Q5TFE4 455 aa12.56□□□□□ -0.4
DDX39B-219ENST00000481456 CDKAL1Q5VV42 579 aa12.56□□□□□ -0.4
DDX39B-219ENST00000481456 PAPD7Q5XG87 772 aaKnown RBP12.56□□□□□ -0.4
DDX39B-219ENST00000481456 LRIG3Q6UXM1 1119 aa12.56□□□□□ -0.4
DDX39B-219ENST00000481456 MAGOHBQ96A72 148 aaKnown RBP12.56□□□□□ -0.4
DDX39B-219ENST00000481456 DNAJC7Q99615 494 aa12.56□□□□□ -0.4
DDX39B-219ENST00000481456 NOP53Q9NZM5 478 aaKnown RBP12.56□□□□□ -0.4
DDX39B-219ENST00000481456 KIAA1024Q9UPX6 916 aa12.56□□□□□ -0.4
DDX39B-219ENST00000481456 PVALEFA0A1B0GWK0 134 aa12.56□□□□□ -0.4
DDX39B-219ENST00000481456 THAP12O43422 761 aa12.56□□□□□ -0.4
DDX39B-219ENST00000481456 NGLY1Q96IV0 654 aa12.56□□□□□ -0.4
DDX39B-219ENST00000481456 LCMT1Q9UIC8 334 aa12.56□□□□□ -0.4
DDX39B-219ENST00000481456 A0A1W2PQJ5 194 aa12.56□□□□□ -0.4
DDX39B-219ENST00000481456 RFC4P35249 363 aa12.56□□□□□ -0.4
DDX39B-219ENST00000481456 PDXDC1Q6P996 788 aa12.56□□□□□ -0.4
DDX39B-219ENST00000481456 EDEM3Q9BZQ6 932 aa12.56□□□□□ -0.4
DDX39B-219ENST00000481456 DIS3Q9Y2L1 958 aaKnown RBP12.56□□□□□ -0.4
DDX39B-219ENST00000481456 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.56□□□□□ -0.4
DDX39B-219ENST00000481456 NBPF26B4DH59 902 aa12.56□□□□□ -0.4
DDX39B-219ENST00000481456 TULP2O00295 520 aa12.56□□□□□ -0.4
DDX39B-219ENST00000481456 SART1O43290 800 aaKnown RBP12.56□□□□□ -0.4
DDX39B-219ENST00000481456 NBPF10Q6P3W6 841 aaKnown RBP12.56□□□□□ -0.4
DDX39B-219ENST00000481456 ALKBH5Q6P6C2 394 aaKnown RBP12.56□□□□□ -0.4
DDX39B-219ENST00000481456 TBC1D1Q86TI0 1168 aaPredicted RBP12.56□□□□□ -0.4
DDX39B-219ENST00000481456 MSL3Q8N5Y2 521 aaKnown RBP12.56□□□□□ -0.4
DDX39B-219ENST00000481456 NBPF15Q8N660 670 aa12.56□□□□□ -0.4
DDX39B-219ENST00000481456 PSTPIP2Q9H939 334 aa12.56□□□□□ -0.4
DDX39B-219ENST00000481456 CD2APQ9Y5K6 639 aa12.56□□□□□ -0.4
DDX39B-219ENST00000481456 SETD1BQ9UPS6 1966 aaKnown RBP12.55□□□□□ -0.4
DDX39B-219ENST00000481456 FRMPD2Q68DX3 1309 aaPredicted RBP12.55□□□□□ -0.4
DDX39B-219ENST00000481456 NDC80O14777 642 aa12.55□□□□□ -0.4
DDX39B-219ENST00000481456 CHMP2AO43633 222 aa12.55□□□□□ -0.4
DDX39B-219ENST00000481456 LIN9Q5TKA1 542 aa12.55□□□□□ -0.4
DDX39B-219ENST00000481456 ANKRD40Q6AI12 368 aa12.55□□□□□ -0.4
DDX39B-219ENST00000481456 GBP7Q8N8V2 638 aaPredicted RBP12.55□□□□□ -0.4
DDX39B-219ENST00000481456 ZIM3Q96PE6 472 aa12.55□□□□□ -0.4
DDX39B-219ENST00000481456 PLA2G12BQ9BX93 195 aa12.55□□□□□ -0.4
DDX39B-219ENST00000481456 SPZ1Q9BXG8 430 aa12.55□□□□□ -0.4
DDX39B-219ENST00000481456 ASAP1Q9ULH1 1129 aa12.55□□□□□ -0.4
DDX39B-219ENST00000481456 ERVV-1B6SEH8 477 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms