RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 AMPD3Q01432 767 aa18.71■□□□□ 0.59
SH3D21-203ENST00000480549 KRT31Q15323 416 aa18.71■□□□□ 0.59
SH3D21-203ENST00000480549 KCNK18Q7Z418 384 aa18.71■□□□□ 0.59
SH3D21-203ENST00000480549 JDP2Q8WYK2 163 aa18.71■□□□□ 0.59
SH3D21-203ENST00000480549 LARP4BQ92615 738 aaKnown RBP18.71■□□□□ 0.59
SH3D21-203ENST00000480549 ASIC1P78348 528 aa18.71■□□□□ 0.58
SH3D21-203ENST00000480549 MCM6Q14566 821 aa18.71■□□□□ 0.58
SH3D21-203ENST00000480549 KRT79Q5XKE5 535 aa18.71■□□□□ 0.58
SH3D21-203ENST00000480549 MCTP2Q6DN12 878 aa18.71■□□□□ 0.58
SH3D21-203ENST00000480549 SV2BQ7L1I2 683 aa18.71■□□□□ 0.58
SH3D21-203ENST00000480549 IRF2BP1Q8IU81 584 aa18.71■□□□□ 0.58
SH3D21-203ENST00000480549 MYMKA6NI61 221 aa18.7■□□□□ 0.58
SH3D21-203ENST00000480549 ARHGAP4P98171 946 aa18.7■□□□□ 0.58
SH3D21-203ENST00000480549 PDE4DQ08499 809 aa18.7■□□□□ 0.58
SH3D21-203ENST00000480549 RAD54LQ92698 747 aa18.7■□□□□ 0.58
SH3D21-203ENST00000480549 PCDHA12Q9UN75 941 aa18.7■□□□□ 0.58
SH3D21-203ENST00000480549 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.7■□□□□ 0.583e-7■■■■□ 23.9
SH3D21-203ENST00000480549 EGFRP00533 1210 aa18.7■□□□□ 0.58
SH3D21-203ENST00000480549 ZNF280AP59817 542 aaPredicted RBP18.7■□□□□ 0.58
SH3D21-203ENST00000480549 STK4Q13043 487 aa18.7■□□□□ 0.58
SH3D21-203ENST00000480549 TCP11X2Q5H9J9 407 aa18.7■□□□□ 0.58
SH3D21-203ENST00000480549 CCDC125Q86Z20 511 aa18.7■□□□□ 0.58
SH3D21-203ENST00000480549 CDK5RAP3Q96JB5 506 aa18.7■□□□□ 0.58
SH3D21-203ENST00000480549 VCPKMTQ9H867 229 aa18.7■□□□□ 0.58
SH3D21-203ENST00000480549 EXOC1Q9NV70 894 aa18.7■□□□□ 0.58
SH3D21-203ENST00000480549 PSDA5PKW4 1024 aaPredicted RBP18.69■□□□□ 0.58
SH3D21-203ENST00000480549 H7C1D1 291 aa18.69■□□□□ 0.58
SH3D21-203ENST00000480549 GLIS2Q9BZE0 524 aaPredicted RBP18.69■□□□□ 0.58
SH3D21-203ENST00000480549 SCAF8Q9UPN6 1271 aaKnown RBP18.69■□□□□ 0.58
SH3D21-203ENST00000480549 KCNJ18B7U540 433 aa18.69■□□□□ 0.58
SH3D21-203ENST00000480549 NRDCO43847 1150 aa18.69■□□□□ 0.58
SH3D21-203ENST00000480549 MAP2K2P36507 400 aa18.69■□□□□ 0.58
SH3D21-203ENST00000480549 SREBF1P36956 1147 aa18.69■□□□□ 0.58
SH3D21-203ENST00000480549 SPAG1Q07617 926 aa18.69■□□□□ 0.58
SH3D21-203ENST00000480549 KCNJ12Q14500 433 aa18.69■□□□□ 0.58
SH3D21-203ENST00000480549 HYIQ5T013 277 aa18.69■□□□□ 0.58
SH3D21-203ENST00000480549 TTI2Q6NXR4 508 aa18.69■□□□□ 0.58
SH3D21-203ENST00000480549 FCER1AP12319 257 aa18.69■□□□□ 0.58
SH3D21-203ENST00000480549 TNIP1Q15025 636 aa18.69■□□□□ 0.58
SH3D21-203ENST00000480549 COBLL1Q53SF7 1204 aa18.69■□□□□ 0.58
SH3D21-203ENST00000480549 LENG9Q96B70 501 aa18.69■□□□□ 0.58
SH3D21-203ENST00000480549 DHTKD1Q96HY7 919 aaPredicted RBP18.69■□□□□ 0.58
SH3D21-203ENST00000480549 PPP1R13BQ96KQ4 1090 aa18.69■□□□□ 0.58
SH3D21-203ENST00000480549 PIK3CDO00329 1044 aa18.68■□□□□ 0.58
SH3D21-203ENST00000480549 PSMA7O14818 248 aa18.68■□□□□ 0.58
SH3D21-203ENST00000480549 FOSP01100 380 aaPredicted RBP18.68■□□□□ 0.58
SH3D21-203ENST00000480549 ADKP55263 362 aaKnown RBP18.68■□□□□ 0.58
SH3D21-203ENST00000480549 STIM1Q13586 685 aa18.68■□□□□ 0.58
SH3D21-203ENST00000480549 CNNM4Q6P4Q7 775 aa18.68■□□□□ 0.58
SH3D21-203ENST00000480549 KIAA0895Q8NCT3 520 aa18.68■□□□□ 0.58
SH3D21-203ENST00000480549 ETNPPLQ8TBG4 499 aa18.68■□□□□ 0.58
SH3D21-203ENST00000480549 RANBP17Q9H2T7 1088 aaKnown RBP18.68■□□□□ 0.58
SH3D21-203ENST00000480549 PHF20L1A8MW92 1017 aa18.68■□□□□ 0.58
SH3D21-203ENST00000480549 TBC1D8O95759 1140 aa18.68■□□□□ 0.58
SH3D21-203ENST00000480549 CCT6AP40227 531 aaKnown RBP18.68■□□□□ 0.58
SH3D21-203ENST00000480549 COPB1P53618 953 aaKnown RBP18.68■□□□□ 0.58
SH3D21-203ENST00000480549 Q4G0T1 1027 aa18.68■□□□□ 0.58
SH3D21-203ENST00000480549 FILIP1LQ4L180 1135 aa18.68■□□□□ 0.58
SH3D21-203ENST00000480549 ANKRD20A12PQ8NF67 263 aa18.68■□□□□ 0.58
SH3D21-203ENST00000480549 PPM1EQ8WY54 764 aa18.68■□□□□ 0.58
SH3D21-203ENST00000480549 CCDC47Q96A33 483 aaKnown RBP18.68■□□□□ 0.58
SH3D21-203ENST00000480549 TEPSINQ96N21 525 aa18.68■□□□□ 0.58
SH3D21-203ENST00000480549 UIMC1Q96RL1 719 aa18.68■□□□□ 0.58
SH3D21-203ENST00000480549 SGIP1Q9BQI5 828 aa18.68■□□□□ 0.58
SH3D21-203ENST00000480549 L2HGDHQ9H9P8 463 aa18.68■□□□□ 0.58
SH3D21-203ENST00000480549 RASA3Q14644 834 aa18.67■□□□□ 0.58
SH3D21-203ENST00000480549 MNS1Q8NEH6 495 aa18.67■□□□□ 0.58
SH3D21-203ENST00000480549 EXOC4Q96A65 974 aa18.67■□□□□ 0.58
SH3D21-203ENST00000480549 DUSP9Q99956 384 aaKnown RBP18.67■□□□□ 0.58
SH3D21-203ENST00000480549 SPDYE3A6NKU9 549 aa18.67■□□□□ 0.58
SH3D21-203ENST00000480549 MARCH6O60337 910 aa18.67■□□□□ 0.58
SH3D21-203ENST00000480549 PLA2G6O60733 806 aa18.67■□□□□ 0.58
SH3D21-203ENST00000480549 HOXA13P31271 388 aaPredicted RBP18.67■□□□□ 0.58
SH3D21-203ENST00000480549 UNC13DQ70J99 1090 aa18.67■□□□□ 0.58
SH3D21-203ENST00000480549 CCDC84Q86UT8 332 aaPredicted RBP18.67■□□□□ 0.58
SH3D21-203ENST00000480549 HPS3Q969F9 1004 aa18.67■□□□□ 0.58
SH3D21-203ENST00000480549 TAB2Q9NYJ8 693 aa18.67■□□□□ 0.58
SH3D21-203ENST00000480549 PPP1R1BQ9UD71 204 aaPredicted RBP18.67■□□□□ 0.58
SH3D21-203ENST00000480549 ITIH6Q6UXX5 1313 aa18.67■□□□□ 0.58
SH3D21-203ENST00000480549 FAM86B1E9PN63 330 aa18.67■□□□□ 0.58
SH3D21-203ENST00000480549 FAM86B2P0C5J1 330 aa18.67■□□□□ 0.58
SH3D21-203ENST00000480549 PRELPP51888 382 aa18.67■□□□□ 0.58
SH3D21-203ENST00000480549 SPIRE1Q08AE8 756 aa18.67■□□□□ 0.58
SH3D21-203ENST00000480549 ZYXQ15942 572 aaKnown RBP18.67■□□□□ 0.58
SH3D21-203ENST00000480549 UBXN6Q9BZV1 441 aa18.67■□□□□ 0.58
SH3D21-203ENST00000480549 THAP9Q9H5L6 903 aa18.67■□□□□ 0.58
SH3D21-203ENST00000480549 PVALEFA0A1B0GWK0 134 aa18.66■□□□□ 0.58
SH3D21-203ENST00000480549 IVLP07476 585 aa18.66■□□□□ 0.58
SH3D21-203ENST00000480549 RPS12P25398 132 aaKnown RBP18.66■□□□□ 0.58
SH3D21-203ENST00000480549 VPS16Q9H269 839 aa18.66■□□□□ 0.58
SH3D21-203ENST00000480549 ASNSP08243 561 aa18.66■□□□□ 0.58
SH3D21-203ENST00000480549 CCNE1P24864 410 aa18.66■□□□□ 0.58
SH3D21-203ENST00000480549 CIITAP33076 1130 aa18.66■□□□□ 0.58
SH3D21-203ENST00000480549 SLFN12Q8IYM2 578 aa18.66■□□□□ 0.58
SH3D21-203ENST00000480549 P2RX5Q93086 422 aa18.66■□□□□ 0.58
SH3D21-203ENST00000480549 BAG1Q99933 345 aaPredicted RBP18.66■□□□□ 0.58
SH3D21-203ENST00000480549 SH2D4AQ9H788 454 aa18.66■□□□□ 0.58
SH3D21-203ENST00000480549 LTBP3Q9NS15 1303 aa18.66■□□□□ 0.58
SH3D21-203ENST00000480549 KIF2AO00139 706 aaPredicted RBP18.65■□□□□ 0.58
SH3D21-203ENST00000480549 N4BP3O15049 544 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms