RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 L3MBTL1Q9Y468 752 aa11.7□□□□□ -0.54
SIK3-210ENST00000480468 NEFHP12036 1026 aa11.7□□□□□ -0.54
SIK3-210ENST00000480468 ZNF131P52739 623 aa11.7□□□□□ -0.54
SIK3-210ENST00000480468 RASSF7Q02833 373 aa11.7□□□□□ -0.54
SIK3-210ENST00000480468 NAALADL2Q58DX5 795 aa11.7□□□□□ -0.54
SIK3-210ENST00000480468 SLC30A9Q6PML9 568 aa11.7□□□□□ -0.54
SIK3-210ENST00000480468 TRPM8Q7Z2W7 1104 aa11.7□□□□□ -0.54
SIK3-210ENST00000480468 CMTR1Q8N1G2 835 aaKnown RBP11.7□□□□□ -0.54
SIK3-210ENST00000480468 SCFD2Q8WU76 684 aa11.7□□□□□ -0.54
SIK3-210ENST00000480468 PIH1D3Q9NQM4 214 aaKnown RBP11.7□□□□□ -0.54
SIK3-210ENST00000480468 PANK4Q9NVE7 773 aa11.7□□□□□ -0.54
SIK3-210ENST00000480468 ZFATQ9P243 1243 aa11.7□□□□□ -0.54
SIK3-210ENST00000480468 FBXL5Q9UKA1 691 aa11.7□□□□□ -0.54
SIK3-210ENST00000480468 ENO4A6NNW6 628 aa11.69□□□□□ -0.54
SIK3-210ENST00000480468 DIAPH2O60879 1101 aa11.69□□□□□ -0.54
SIK3-210ENST00000480468 PALMO75781 387 aa11.69□□□□□ -0.54
SIK3-210ENST00000480468 AP1G2O75843 785 aa11.69□□□□□ -0.54
SIK3-210ENST00000480468 SLC1A4P43007 532 aa11.69□□□□□ -0.54
SIK3-210ENST00000480468 SPATA31A3Q5VYP0 1347 aa11.69□□□□□ -0.54
SIK3-210ENST00000480468 TBC1D1Q86TI0 1168 aaPredicted RBP11.69□□□□□ -0.54
SIK3-210ENST00000480468 TTC5Q8N0Z6 440 aa11.69□□□□□ -0.54
SIK3-210ENST00000480468 NUP133Q8WUM0 1156 aa11.69□□□□□ -0.54
SIK3-210ENST00000480468 SEC14L1Q92503 715 aa11.69□□□□□ -0.54
SIK3-210ENST00000480468 BAP1Q92560 729 aa11.69□□□□□ -0.54
SIK3-210ENST00000480468 SYN2Q92777 582 aaPredicted RBP11.69□□□□□ -0.54
SIK3-210ENST00000480468 NUCKS1Q9H1E3 243 aaKnown RBP11.69□□□□□ -0.54
SIK3-210ENST00000480468 CUEDC2Q9H467 287 aa11.69□□□□□ -0.54
SIK3-210ENST00000480468 RNF41Q9H4P4 317 aaPredicted RBP11.69□□□□□ -0.54
SIK3-210ENST00000480468 MYH7BA7E2Y1 1941 aa11.69□□□□□ -0.54
SIK3-210ENST00000480468 GLI3P10071 1580 aa11.69□□□□□ -0.54
SIK3-210ENST00000480468 RIC1Q4ADV7 1423 aa11.68□□□□□ -0.54
SIK3-210ENST00000480468 LRRC53A6NM62 1247 aa11.68□□□□□ -0.54
SIK3-210ENST00000480468 BACH1O14867 736 aa11.68□□□□□ -0.54
SIK3-210ENST00000480468 BUB1O43683 1085 aa11.68□□□□□ -0.54
SIK3-210ENST00000480468 CTNND1O60716 968 aaKnown RBP11.68□□□□□ -0.54
SIK3-210ENST00000480468 LINGO3P0C6S8 592 aa11.68□□□□□ -0.54
SIK3-210ENST00000480468 VWA3BQ502W6 1294 aa11.68□□□□□ -0.54
SIK3-210ENST00000480468 CMPK2Q5EBM0 449 aa11.68□□□□□ -0.54
SIK3-210ENST00000480468 CWF19L1Q69YN2 538 aaKnown RBP11.68□□□□□ -0.54
SIK3-210ENST00000480468 ANKRD40Q6AI12 368 aa11.68□□□□□ -0.54
SIK3-210ENST00000480468 PDXDC1Q6P996 788 aa11.68□□□□□ -0.54
SIK3-210ENST00000480468 TMC3Q7Z5M5 1100 aa11.68□□□□□ -0.54
SIK3-210ENST00000480468 HOOK3Q86VS8 718 aa11.68□□□□□ -0.54
SIK3-210ENST00000480468 STAG2Q8N3U4 1231 aa11.68□□□□□ -0.54
SIK3-210ENST00000480468 GBP7Q8N8V2 638 aaPredicted RBP11.68□□□□□ -0.54
SIK3-210ENST00000480468 ACTRT1Q8TDG2 376 aa11.68□□□□□ -0.54
SIK3-210ENST00000480468 PBKQ96KB5 322 aa11.68□□□□□ -0.54
SIK3-210ENST00000480468 SAMD15Q9P1V8 674 aa11.68□□□□□ -0.54
SIK3-210ENST00000480468 PHF8Q9UPP1 1060 aa11.68□□□□□ -0.54
SIK3-210ENST00000480468 F8VZ95 297 aa11.68□□□□□ -0.54
SIK3-210ENST00000480468 STXBP3O00186 592 aa11.68□□□□□ -0.54
SIK3-210ENST00000480468 SART1O43290 800 aaKnown RBP11.68□□□□□ -0.54
SIK3-210ENST00000480468 IDH1O75874 414 aaKnown RBP11.68□□□□□ -0.54
SIK3-210ENST00000480468 WFS1O76024 890 aa11.68□□□□□ -0.54
SIK3-210ENST00000480468 RTN3O95197 1032 aaPredicted RBP11.68□□□□□ -0.54
SIK3-210ENST00000480468 ROR2Q01974 943 aaKnown RBP11.68□□□□□ -0.54
SIK3-210ENST00000480468 SEC23AQ15436 765 aa11.68□□□□□ -0.54
SIK3-210ENST00000480468 KRT71Q3SY84 523 aa11.68□□□□□ -0.54
SIK3-210ENST00000480468 HGSNATQ68CP4 663 aa11.68□□□□□ -0.54
SIK3-210ENST00000480468 NBPF5PQ86XG9 351 aaPredicted RBP11.68□□□□□ -0.54
SIK3-210ENST00000480468 ANKRD13CQ8N6S4 541 aa11.68□□□□□ -0.54
SIK3-210ENST00000480468 C4orf32Q8N8J7 132 aa11.68□□□□□ -0.54
SIK3-210ENST00000480468 ZFAND2BQ8WV99 257 aa11.68□□□□□ -0.54
SIK3-210ENST00000480468 UBLCP1Q8WVY7 318 aaPredicted RBP11.68□□□□□ -0.54
SIK3-210ENST00000480468 NSRP1Q9H0G5 558 aaKnown RBP11.68□□□□□ -0.54
SIK3-210ENST00000480468 TMX4Q9H1E5 349 aaPredicted RBP11.68□□□□□ -0.54
SIK3-210ENST00000480468 BTNL10A8MVZ5 291 aa11.67□□□□□ -0.54
SIK3-210ENST00000480468 DCDC2CA8MYV0 355 aa11.67□□□□□ -0.54
SIK3-210ENST00000480468 CCDC188H7C350 402 aa11.67□□□□□ -0.54
SIK3-210ENST00000480468 EPHB6O15197 1021 aa11.67□□□□□ -0.54
SIK3-210ENST00000480468 FLOT1O75955 427 aa11.67□□□□□ -0.54
SIK3-210ENST00000480468 GNAT2P19087 354 aa11.67□□□□□ -0.54
SIK3-210ENST00000480468 MMP13P45452 471 aa11.67□□□□□ -0.54
SIK3-210ENST00000480468 NCALDP61601 193 aa11.67□□□□□ -0.54
SIK3-210ENST00000480468 GFPT1Q06210 699 aaPredicted RBP11.67□□□□□ -0.54
SIK3-210ENST00000480468 SAMD1Q6SPF0 538 aaPredicted RBP11.67□□□□□ -0.54
SIK3-210ENST00000480468 RRAGAQ7L523 313 aa11.67□□□□□ -0.54
SIK3-210ENST00000480468 ATXN2LQ8WWM7 1075 aaKnown RBP11.67□□□□□ -0.54
SIK3-210ENST00000480468 TAF4BQ92750 862 aa11.67□□□□□ -0.54
SIK3-210ENST00000480468 PGM2Q96G03 612 aa11.67□□□□□ -0.54
SIK3-210ENST00000480468 CCSER1Q9C0I3 900 aa11.67□□□□□ -0.54
SIK3-210ENST00000480468 ANKIB1Q9P2G1 1089 aa11.67□□□□□ -0.54
SIK3-210ENST00000480468 GSG1L2A8MUP6 293 aa11.67□□□□□ -0.54
SIK3-210ENST00000480468 PCCAP05165 728 aaPredicted RBP11.67□□□□□ -0.54
SIK3-210ENST00000480468 CSB-PGBD3P0DP91 1061 aa11.67□□□□□ -0.54
SIK3-210ENST00000480468 GCLCP48506 637 aaPredicted RBP11.67□□□□□ -0.54
SIK3-210ENST00000480468 PAPOLAP51003 745 aaKnown RBP11.67□□□□□ -0.54
SIK3-210ENST00000480468 ALDH5A1P51649 535 aaPredicted RBP11.67□□□□□ -0.54
SIK3-210ENST00000480468 MAN2A1Q16706 1144 aa11.67□□□□□ -0.54
SIK3-210ENST00000480468 GALNTL6Q49A17 601 aa11.67□□□□□ -0.54
SIK3-210ENST00000480468 ANKRD20A2Q5SQ80 823 aa11.67□□□□□ -0.54
SIK3-210ENST00000480468 ANKRD20A1Q5TYW2 823 aa11.67□□□□□ -0.54
SIK3-210ENST00000480468 ANKRD20A3Q5VUR7 823 aa11.67□□□□□ -0.54
SIK3-210ENST00000480468 GIGYF2Q6Y7W6 1299 aaKnown RBP11.67□□□□□ -0.54
SIK3-210ENST00000480468 KLHL7Q8IXQ5 586 aa11.67□□□□□ -0.54
SIK3-210ENST00000480468 DRAXINQ8NBI3 349 aaPredicted RBP11.67□□□□□ -0.54
SIK3-210ENST00000480468 ZKSCAN3Q9BRR0 538 aa11.67□□□□□ -0.54
SIK3-210ENST00000480468 PLA2G12BQ9BX93 195 aa11.67□□□□□ -0.54
SIK3-210ENST00000480468 NACAP1Q9BZK3 213 aa11.67□□□□□ -0.54
SIK3-210ENST00000480468 YIPF3Q9GZM5 350 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms