RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 AIFM3Q96NN9 605 aa9.39□□□□□ -0.91
GAPVD1-217ENST00000479511 CDIP1Q9H305 208 aa9.39□□□□□ -0.91
GAPVD1-217ENST00000479511 RCAN3Q9UKA8 241 aa9.39□□□□□ -0.91
GAPVD1-217ENST00000479511 FAM50BQ9Y247 325 aa9.39□□□□□ -0.91
GAPVD1-217ENST00000479511 DAAM1Q9Y4D1 1078 aa9.39□□□□□ -0.91
GAPVD1-217ENST00000479511 XPOTO43592 962 aaKnown RBP9.38□□□□□ -0.91
GAPVD1-217ENST00000479511 KRT37O76014 449 aa9.38□□□□□ -0.91
GAPVD1-217ENST00000479511 SERPINB3P29508 390 aa9.38□□□□□ -0.91
GAPVD1-217ENST00000479511 GPR3P46089 330 aa9.38□□□□□ -0.91
GAPVD1-217ENST00000479511 TNK2Q07912 1038 aa9.38□□□□□ -0.91
GAPVD1-217ENST00000479511 PICALMQ13492 652 aa9.38□□□□□ -0.91
GAPVD1-217ENST00000479511 RALBP1Q15311 655 aa9.38□□□□□ -0.91
GAPVD1-217ENST00000479511 IQCEQ6IPM2 695 aa9.38□□□□□ -0.91
GAPVD1-217ENST00000479511 FSTL4Q6MZW2 842 aa9.38□□□□□ -0.91
GAPVD1-217ENST00000479511 ZNF655Q8N720 491 aaPredicted RBP9.38□□□□□ -0.91
GAPVD1-217ENST00000479511 ENOX1Q8TC92 643 aaKnown RBP9.38□□□□□ -0.91
GAPVD1-217ENST00000479511 COX4I2Q96KJ9 171 aa9.38□□□□□ -0.91
GAPVD1-217ENST00000479511 STRBPQ96SI9 672 aaKnown RBP9.38□□□□□ -0.91
GAPVD1-217ENST00000479511 MMP19Q99542 508 aa9.38□□□□□ -0.91
GAPVD1-217ENST00000479511 UBA5Q9GZZ9 404 aa9.38□□□□□ -0.91
GAPVD1-217ENST00000479511 AKTIPQ9H8T0 292 aa9.38□□□□□ -0.91
GAPVD1-217ENST00000479511 PTPRHQ9HD43 1115 aa9.38□□□□□ -0.91
GAPVD1-217ENST00000479511 PRDM5Q9NQX1 630 aaPredicted RBP9.38□□□□□ -0.91
GAPVD1-217ENST00000479511 CATSPERZQ9NTU4 200 aa9.38□□□□□ -0.91
GAPVD1-217ENST00000479511 BSDC1Q9NW68 430 aaPredicted RBP9.38□□□□□ -0.91
GAPVD1-217ENST00000479511 ATAD2BQ9ULI0 1458 aa9.38□□□□□ -0.91
GAPVD1-217ENST00000479511 TRIM75PA6NK02 468 aa9.37□□□□□ -0.91
GAPVD1-217ENST00000479511 FAM47E-STBD1D6RA91 191 aa9.37□□□□□ -0.91
GAPVD1-217ENST00000479511 DVL2O14641 736 aa9.37□□□□□ -0.91
GAPVD1-217ENST00000479511 ERC2O15083 957 aa9.37□□□□□ -0.91
GAPVD1-217ENST00000479511 IL33O95760 270 aa9.37□□□□□ -0.91
GAPVD1-217ENST00000479511 FOSP01100 380 aaPredicted RBP9.37□□□□□ -0.91
GAPVD1-217ENST00000479511 GSTM1P09488 218 aa9.37□□□□□ -0.91
GAPVD1-217ENST00000479511 ZBTB48P10074 688 aaPredicted RBP9.37□□□□□ -0.91
GAPVD1-217ENST00000479511 GLB1P16278 677 aa9.37□□□□□ -0.91
GAPVD1-217ENST00000479511 SLC9A1P19634 815 aa9.37□□□□□ -0.91
GAPVD1-217ENST00000479511 GRK2P25098 689 aa9.37□□□□□ -0.91
GAPVD1-217ENST00000479511 GRK3P35626 688 aa9.37□□□□□ -0.91
GAPVD1-217ENST00000479511 GRIK4Q16099 956 aa9.37□□□□□ -0.91
GAPVD1-217ENST00000479511 ARHGAP44Q17R89 818 aa9.37□□□□□ -0.91
GAPVD1-217ENST00000479511 CLEC16AQ2KHT3 1053 aa9.37□□□□□ -0.91
GAPVD1-217ENST00000479511 EEF1DP3Q658K8 133 aa9.37□□□□□ -0.91
GAPVD1-217ENST00000479511 B3GNT9Q6UX72 402 aa9.37□□□□□ -0.91
GAPVD1-217ENST00000479511 HEXIM2Q96MH2 286 aaKnown RBP9.37□□□□□ -0.91
GAPVD1-217ENST00000479511 NUP88Q99567 741 aaPredicted RBP9.37□□□□□ -0.91
GAPVD1-217ENST00000479511 KCNJ15Q99712 375 aa9.37□□□□□ -0.91
GAPVD1-217ENST00000479511 YIPF2Q9BWQ6 316 aa9.37□□□□□ -0.91
GAPVD1-217ENST00000479511 SAP30BPQ9UHR5 308 aaKnown RBP9.37□□□□□ -0.91
GAPVD1-217ENST00000479511 NPHP3-ACAD11A0A0J9YXS1 232 aa9.36□□□□□ -0.91
GAPVD1-217ENST00000479511 ANO9A1A5B4 782 aa9.36□□□□□ -0.91
GAPVD1-217ENST00000479511 LCHNA4D1U4 455 aa9.36□□□□□ -0.91
GAPVD1-217ENST00000479511 ZNF205O95201 554 aa9.36□□□□□ -0.91
GAPVD1-217ENST00000479511 PAMP19021 973 aa9.36□□□□□ -0.91
GAPVD1-217ENST00000479511 KIR3DL1P43629 444 aa9.36□□□□□ -0.91
GAPVD1-217ENST00000479511 SNRPNP63162 240 aaKnown RBP9.36□□□□□ -0.91
GAPVD1-217ENST00000479511 LACTBP83111 547 aaPredicted RBP9.36□□□□□ -0.91
GAPVD1-217ENST00000479511 RGL3Q3MIN7 710 aa9.36□□□□□ -0.91
GAPVD1-217ENST00000479511 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.36□□□□□ -0.91
GAPVD1-217ENST00000479511 MORC1Q86VD1 984 aa9.36□□□□□ -0.91
GAPVD1-217ENST00000479511 RASSF3Q86WH2 238 aa9.36□□□□□ -0.91
GAPVD1-217ENST00000479511 CPNE8Q86YQ8 564 aa9.36□□□□□ -0.91
GAPVD1-217ENST00000479511 LMBR1Q8WVP7 490 aa9.36□□□□□ -0.91
GAPVD1-217ENST00000479511 TEKT5Q96M29 485 aa9.36□□□□□ -0.91
GAPVD1-217ENST00000479511 SMURF1Q9HCE7 757 aa9.36□□□□□ -0.91
GAPVD1-217ENST00000479511 MRFAP1Q9Y605 127 aa9.36□□□□□ -0.91
GAPVD1-217ENST00000479511 RSF1Q96T23 1441 aaPredicted RBP9.36□□□□□ -0.91
GAPVD1-217ENST00000479511 GOLGA8AA7E2F4 631 aa9.35□□□□□ -0.91
GAPVD1-217ENST00000479511 GOLGA8BA8MQT2 603 aa9.35□□□□□ -0.91
GAPVD1-217ENST00000479511 ZNF561-AS1K7EIQ3 104 aa9.35□□□□□ -0.91
GAPVD1-217ENST00000479511 GSTA4O15217 222 aa9.35□□□□□ -0.91
GAPVD1-217ENST00000479511 SH3BP5O60239 455 aa9.35□□□□□ -0.91
GAPVD1-217ENST00000479511 FAM87AP0C7U9 286 aa9.35□□□□□ -0.91
GAPVD1-217ENST00000479511 SRFP11831 508 aa9.35□□□□□ -0.91
GAPVD1-217ENST00000479511 PDE6AP16499 860 aa9.35□□□□□ -0.91
GAPVD1-217ENST00000479511 JAM2P57087 298 aa9.35□□□□□ -0.91
GAPVD1-217ENST00000479511 SMAD3P84022 425 aaKnown RBP9.35□□□□□ -0.91
GAPVD1-217ENST00000479511 SAFBQ15424 915 aaKnown RBP eCLIP9.35□□□□□ -0.91
GAPVD1-217ENST00000479511 ZRSR2Q15696 482 aaKnown RBP9.35□□□□□ -0.91
GAPVD1-217ENST00000479511 SMAD2Q15796 467 aaKnown RBP9.35□□□□□ -0.91
GAPVD1-217ENST00000479511 GPR158Q5T848 1215 aa9.35□□□□□ -0.91
GAPVD1-217ENST00000479511 OSTM1Q86WC4 334 aa9.35□□□□□ -0.91
GAPVD1-217ENST00000479511 ELF4Q99607 663 aaPredicted RBP9.35□□□□□ -0.91
GAPVD1-217ENST00000479511 CEP41Q9BYV8 373 aa9.35□□□□□ -0.91
GAPVD1-217ENST00000479511 DUSP15Q9H1R2 295 aaPredicted RBP9.35□□□□□ -0.91
GAPVD1-217ENST00000479511 DDX21Q9NR30 783 aaKnown RBP eCLIP9.35□□□□□ -0.91
GAPVD1-217ENST00000479511 CAPN6Q9Y6Q1 641 aa9.35□□□□□ -0.91
GAPVD1-217ENST00000479511 KLHL33A6NCF5 533 aa9.34□□□□□ -0.91
GAPVD1-217ENST00000479511 H7C1D1 291 aa9.34□□□□□ -0.91
GAPVD1-217ENST00000479511 AMY2AP04746 511 aa9.34□□□□□ -0.91
GAPVD1-217ENST00000479511 AMY2BP19961 511 aa9.34□□□□□ -0.91
GAPVD1-217ENST00000479511 RXRBP28702 533 aa9.34□□□□□ -0.91
GAPVD1-217ENST00000479511 TPP2P29144 1249 aaPredicted RBP9.34□□□□□ -0.91
GAPVD1-217ENST00000479511 HTR3AP46098 478 aa9.34□□□□□ -0.91
GAPVD1-217ENST00000479511 RBM10P98175 930 aaKnown RBP9.34□□□□□ -0.91
GAPVD1-217ENST00000479511 PDCD1Q15116 288 aa9.34□□□□□ -0.91
GAPVD1-217ENST00000479511 CRY1Q16526 586 aa9.34□□□□□ -0.91
GAPVD1-217ENST00000479511 RRP12Q5JTH9 1297 aaKnown RBP9.34□□□□□ -0.91
GAPVD1-217ENST00000479511 EFCAB2Q5VUJ9 269 aa9.34□□□□□ -0.91
GAPVD1-217ENST00000479511 USHBP1Q8N6Y0 703 aa9.34□□□□□ -0.91
GAPVD1-217ENST00000479511 BOCQ9BWV1 1114 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms