RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 SRBD1Q8N5C6 995 aaKnown RBP10.45□□□□□ -0.74
CMTM1-208ENST00000479381 SAMD3Q8N6K7 520 aa10.45□□□□□ -0.74
CMTM1-208ENST00000479381 AFG1LQ8WV93 481 aa10.45□□□□□ -0.74
CMTM1-208ENST00000479381 GPKOWQ92917 476 aaPredicted RBP eCLIP10.45□□□□□ -0.74
CMTM1-208ENST00000479381 TOX2Q96NM4 488 aa10.45□□□□□ -0.74
CMTM1-208ENST00000479381 PDCD2LQ9BRP1 358 aa10.45□□□□□ -0.74
CMTM1-208ENST00000479381 ALG1Q9BT22 464 aa10.45□□□□□ -0.74
CMTM1-208ENST00000479381 HIPK3Q9H422 1215 aa10.45□□□□□ -0.74
CMTM1-208ENST00000479381 RTEL1Q9NZ71 1219 aa10.45□□□□□ -0.74
CMTM1-208ENST00000479381 LTBP2Q14767 1821 aa10.44□□□□□ -0.74
CMTM1-208ENST00000479381 CCDC196A0A1B0GTZ2 297 aa10.44□□□□□ -0.74
CMTM1-208ENST00000479381 ZBBXA8MT70 800 aa10.44□□□□□ -0.74
CMTM1-208ENST00000479381 ARIH2O95376 493 aa10.44□□□□□ -0.74
CMTM1-208ENST00000479381 GGPS1O95749 300 aa10.44□□□□□ -0.74
CMTM1-208ENST00000479381 TIMP1P01033 207 aa10.44□□□□□ -0.74
CMTM1-208ENST00000479381 MMP3P08254 477 aa10.44□□□□□ -0.74
CMTM1-208ENST00000479381 SUPT20HL2P0C7V6 817 aa10.44□□□□□ -0.74
CMTM1-208ENST00000479381 CPA1P15085 419 aa10.44□□□□□ -0.74
CMTM1-208ENST00000479381 CCL23P55773 120 aa10.44□□□□□ -0.74
CMTM1-208ENST00000479381 APOBRQ0VD83 1088 aa10.44□□□□□ -0.74
CMTM1-208ENST00000479381 FAAP100Q0VG06 881 aa10.44□□□□□ -0.74
CMTM1-208ENST00000479381 DGKDQ16760 1214 aa10.44□□□□□ -0.74
CMTM1-208ENST00000479381 CCSAPQ6IQ19 270 aaPredicted RBP10.44□□□□□ -0.74
CMTM1-208ENST00000479381 KCNV1Q6PIU1 500 aa10.44□□□□□ -0.74
CMTM1-208ENST00000479381 APOA5Q6Q788 366 aa10.44□□□□□ -0.74
CMTM1-208ENST00000479381 TMTC3Q6ZXV5 915 aa10.44□□□□□ -0.74
CMTM1-208ENST00000479381 ANKRD33Q7Z3H0 272 aa10.44□□□□□ -0.74
CMTM1-208ENST00000479381 NLRX1Q86UT6 975 aa10.44□□□□□ -0.74
CMTM1-208ENST00000479381 FAM126BQ8IXS8 530 aa10.44□□□□□ -0.74
CMTM1-208ENST00000479381 RETREG2Q8NC44 543 aa10.44□□□□□ -0.74
CMTM1-208ENST00000479381 PPP1R13LQ8WUF5 828 aa10.44□□□□□ -0.74
CMTM1-208ENST00000479381 BRF1Q92994 677 aa10.44□□□□□ -0.74
CMTM1-208ENST00000479381 MTMR8Q96EF0 704 aa10.44□□□□□ -0.74
CMTM1-208ENST00000479381 SPATA33Q96N06 139 aa10.44□□□□□ -0.74
CMTM1-208ENST00000479381 KATNAL1Q9BW62 490 aa10.44□□□□□ -0.74
CMTM1-208ENST00000479381 SEZ6LQ9BYH1 1024 aa10.44□□□□□ -0.74
CMTM1-208ENST00000479381 MTIF3Q9H2K0 278 aaKnown RBP10.44□□□□□ -0.74
CMTM1-208ENST00000479381 PSTPIP2Q9H939 334 aa10.44□□□□□ -0.74
CMTM1-208ENST00000479381 MYH7BA7E2Y1 1941 aa10.44□□□□□ -0.74
CMTM1-208ENST00000479381 KIAA1217Q5T5P2 1943 aa10.44□□□□□ -0.74
CMTM1-208ENST00000479381 RBM47A0AV96 593 aaKnown RBP10.43□□□□□ -0.74
CMTM1-208ENST00000479381 SOX1O00570 391 aaPredicted RBP10.43□□□□□ -0.74
CMTM1-208ENST00000479381 KIAA0355O15063 1070 aa10.43□□□□□ -0.74
CMTM1-208ENST00000479381 B4GALT4O60513 344 aa10.43□□□□□ -0.74
CMTM1-208ENST00000479381 CYP2C18P33260 490 aa10.43□□□□□ -0.74
CMTM1-208ENST00000479381 HSPA4P34932 840 aa10.43□□□□□ -0.74
CMTM1-208ENST00000479381 PURAQ00577 322 aaKnown RBP10.43□□□□□ -0.74
CMTM1-208ENST00000479381 LAMC2Q13753 1193 aa10.43□□□□□ -0.74
CMTM1-208ENST00000479381 SHHQ15465 462 aa10.43□□□□□ -0.74
CMTM1-208ENST00000479381 UBE2SQ16763 222 aa10.43□□□□□ -0.74
CMTM1-208ENST00000479381 NBPF20Q3BBV1 942 aa10.43□□□□□ -0.74
CMTM1-208ENST00000479381 ZNF697Q5TEC3 545 aa10.43□□□□□ -0.74
CMTM1-208ENST00000479381 ERICH6BQ5W0A0 696 aa10.43□□□□□ -0.74
CMTM1-208ENST00000479381 GPR153Q6NV75 609 aa10.43□□□□□ -0.74
CMTM1-208ENST00000479381 USP17L6PQ6QN14 398 aa10.43□□□□□ -0.74
CMTM1-208ENST00000479381 SGMS1Q86VZ5 419 aa10.43□□□□□ -0.74
CMTM1-208ENST00000479381 CCDC155Q8N6L0 562 aa10.43□□□□□ -0.74
CMTM1-208ENST00000479381 C7orf31Q8N865 590 aa10.43□□□□□ -0.74
CMTM1-208ENST00000479381 FAM161BQ96MY7 647 aa10.43□□□□□ -0.74
CMTM1-208ENST00000479381 TRPV6Q9H1D0 765 aa10.43□□□□□ -0.74
CMTM1-208ENST00000479381 TRMT13Q9NUP7 481 aaKnown RBP10.43□□□□□ -0.74
CMTM1-208ENST00000479381 PKD2L1Q9P0L9 805 aa10.43□□□□□ -0.74
CMTM1-208ENST00000479381 PCDHGA4Q9Y5G9 962 aa10.43□□□□□ -0.74
CMTM1-208ENST00000479381 SNX14Q9Y5W7 946 aa10.43□□□□□ -0.74
CMTM1-208ENST00000479381 CPLX1O14810 134 aa10.42□□□□□ -0.74
CMTM1-208ENST00000479381 CTAGE5O15320 804 aa10.42□□□□□ -0.74
CMTM1-208ENST00000479381 ZNF286BP0CG31 522 aa10.42□□□□□ -0.74
CMTM1-208ENST00000479381 ACRP10323 421 aa10.42□□□□□ -0.74
CMTM1-208ENST00000479381 CYP2C9P11712 490 aa10.42□□□□□ -0.74
CMTM1-208ENST00000479381 CSF2RAP15509 400 aa10.42□□□□□ -0.74
CMTM1-208ENST00000479381 SMARCA1P28370 1054 aa10.42□□□□□ -0.74
CMTM1-208ENST00000479381 ZNF76P36508 570 aa10.42□□□□□ -0.74
CMTM1-208ENST00000479381 ADCY7P51828 1080 aa10.42□□□□□ -0.74
CMTM1-208ENST00000479381 SLC35G1Q2M3R5 365 aa10.42□□□□□ -0.74
CMTM1-208ENST00000479381 LRIT3Q3SXY7 679 aa10.42□□□□□ -0.74
CMTM1-208ENST00000479381 C9orf50Q5SZB4 431 aa10.42□□□□□ -0.74
CMTM1-208ENST00000479381 MFSD5Q6N075 450 aa10.42□□□□□ -0.74
CMTM1-208ENST00000479381 PSRC1Q6PGN9 363 aaPredicted RBP10.42□□□□□ -0.74
CMTM1-208ENST00000479381 DEFB123Q8N688 67 aa10.42□□□□□ -0.74
CMTM1-208ENST00000479381 IL31RAQ8NI17 732 aa10.42□□□□□ -0.74
CMTM1-208ENST00000479381 HS3ST6Q96QI5 342 aa10.42□□□□□ -0.74
CMTM1-208ENST00000479381 ALDH8A1Q9H2A2 487 aaPredicted RBP10.42□□□□□ -0.74
CMTM1-208ENST00000479381 PRO3102Q9H379 93 aa10.42□□□□□ -0.74
CMTM1-208ENST00000479381 TCEAL9Q9UHQ7 104 aa10.42□□□□□ -0.74
CMTM1-208ENST00000479381 DDX41Q9UJV9 622 aaKnown RBP10.42□□□□□ -0.74
CMTM1-208ENST00000479381 CNTNAP5Q8WYK1 1306 aa10.41□□□□□ -0.74
CMTM1-208ENST00000479381 OPLAHO14841 1288 aa10.41□□□□□ -0.74
CMTM1-208ENST00000479381 FIBPO43427 364 aa10.41□□□□□ -0.74
CMTM1-208ENST00000479381 STAM2O75886 525 aa10.41□□□□□ -0.74
CMTM1-208ENST00000479381 UBA1P22314 1058 aaKnown RBP10.41□□□□□ -0.74
CMTM1-208ENST00000479381 RPS6KB1P23443 525 aa10.41□□□□□ -0.74
CMTM1-208ENST00000479381 ITGB8P26012 769 aa10.41□□□□□ -0.74
CMTM1-208ENST00000479381 PSEN2P49810 448 aa10.41□□□□□ -0.74
CMTM1-208ENST00000479381 CDK7P50613 346 aa10.41□□□□□ -0.74
CMTM1-208ENST00000479381 CCT2P78371 535 aaKnown RBP10.41□□□□□ -0.74
CMTM1-208ENST00000479381 ARHGAP1Q07960 439 aa10.41□□□□□ -0.74
CMTM1-208ENST00000479381 NEDD9Q14511 834 aa10.41□□□□□ -0.74
CMTM1-208ENST00000479381 PTGISQ16647 500 aa10.41□□□□□ -0.74
CMTM1-208ENST00000479381 UTP14CQ5TAP6 766 aaKnown RBP10.41□□□□□ -0.74
CMTM1-208ENST00000479381 CPLX2Q6PUV4 134 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms