RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 MAP2K2P36507 400 aa16.44■□□□□ 0.22
U2AF1-210ENST00000478282 PTGISQ16647 500 aa16.44■□□□□ 0.22
U2AF1-210ENST00000478282 CCDC152Q4G0S7 254 aa16.44■□□□□ 0.22
U2AF1-210ENST00000478282 CNNM4Q6P4Q7 775 aa16.44■□□□□ 0.22
U2AF1-210ENST00000478282 RRAGAQ7L523 313 aa16.44■□□□□ 0.22
U2AF1-210ENST00000478282 KIAA0895Q8NCT3 520 aa16.44■□□□□ 0.22
U2AF1-210ENST00000478282 PIK3R5Q8WYR1 880 aa16.44■□□□□ 0.22
U2AF1-210ENST00000478282 AK8Q96MA6 479 aa16.44■□□□□ 0.22
U2AF1-210ENST00000478282 EPB41L5Q9HCM4 733 aa16.44■□□□□ 0.22
U2AF1-210ENST00000478282 ASTE1Q2TB18 679 aaPredicted RBP16.43■□□□□ 0.22
U2AF1-210ENST00000478282 CCDC84Q86UT8 332 aaPredicted RBP16.43■□□□□ 0.22
U2AF1-210ENST00000478282 DAGLBQ8NCG7 672 aa16.43■□□□□ 0.22
U2AF1-210ENST00000478282 C1orf131Q8NDD1 294 aaKnown RBP16.43■□□□□ 0.22
U2AF1-210ENST00000478282 TCP11L1Q9NUJ3 509 aa16.43■□□□□ 0.22
U2AF1-210ENST00000478282 GUCY2DQ02846 1103 aa16.43■□□□□ 0.22
U2AF1-210ENST00000478282 MAN2A1Q16706 1144 aa16.43■□□□□ 0.22
U2AF1-210ENST00000478282 CENPPQ6IPU0 288 aa16.43■□□□□ 0.22
U2AF1-210ENST00000478282 RCSD1Q6JBY9 416 aa16.43■□□□□ 0.22
U2AF1-210ENST00000478282 BAP1Q92560 729 aa16.43■□□□□ 0.22
U2AF1-210ENST00000478282 A1CFQ9NQ94 594 aaKnown RBP16.43■□□□□ 0.22
U2AF1-210ENST00000478282 ZSCAN5CA6NGD5 496 aaPredicted RBP16.42■□□□□ 0.22
U2AF1-210ENST00000478282 GYG1P46976 350 aa16.42■□□□□ 0.22
U2AF1-210ENST00000478282 RASSF7Q02833 373 aa16.42■□□□□ 0.22
U2AF1-210ENST00000478282 ZNF384Q8TF68 577 aa16.42■□□□□ 0.22
U2AF1-210ENST00000478282 IFT81Q8WYA0 676 aa16.42■□□□□ 0.22
U2AF1-210ENST00000478282 POLD4Q9HCU8 107 aa16.42■□□□□ 0.22
U2AF1-210ENST00000478282 ABCB11O95342 1321 aa16.42■□□□□ 0.22
U2AF1-210ENST00000478282 ESYT3A0FGR9 886 aa16.42■□□□□ 0.22
U2AF1-210ENST00000478282 BUB1O43683 1085 aa16.42■□□□□ 0.22
U2AF1-210ENST00000478282 SLC1A4P43007 532 aa16.42■□□□□ 0.22
U2AF1-210ENST00000478282 GFPT1Q06210 699 aaPredicted RBP16.42■□□□□ 0.22
U2AF1-210ENST00000478282 TPTE2Q6XPS3 522 aa16.42■□□□□ 0.22
U2AF1-210ENST00000478282 ATP6V1G3Q96LB4 118 aa16.42■□□□□ 0.22
U2AF1-210ENST00000478282 CXorf56Q9H5V9 222 aa16.42■□□□□ 0.22
U2AF1-210ENST00000478282 SSU72P8A0A1W2PR75 194 aa16.42■□□□□ 0.22
U2AF1-210ENST00000478282 PDXDC1Q6P996 788 aa16.42■□□□□ 0.22
U2AF1-210ENST00000478282 GPIHBP1Q8IV16 184 aa16.42■□□□□ 0.22
U2AF1-210ENST00000478282 MYCBPAPQ8TBZ2 947 aa16.42■□□□□ 0.22
U2AF1-210ENST00000478282 TSPY2A6NKD2 308 aa16.41■□□□□ 0.22
U2AF1-210ENST00000478282 MDH1P40925 334 aaKnown RBP16.41■□□□□ 0.22
U2AF1-210ENST00000478282 AMPD3Q01432 767 aa16.41■□□□□ 0.22
U2AF1-210ENST00000478282 NLRP14Q86W24 1093 aa16.41■□□□□ 0.22
U2AF1-210ENST00000478282 WHAMMQ8TF30 809 aa16.41■□□□□ 0.22
U2AF1-210ENST00000478282 HPS3Q969F9 1004 aa16.41■□□□□ 0.22
U2AF1-210ENST00000478282 GGA2Q9UJY4 613 aa16.41■□□□□ 0.22
U2AF1-210ENST00000478282 SRRM3A6NNA2 597 aaPredicted RBP16.41■□□□□ 0.22
U2AF1-210ENST00000478282 HMGB1P1B2RPK0 211 aaPredicted RBP16.41■□□□□ 0.22
U2AF1-210ENST00000478282 GUCY2FP51841 1108 aa16.41■□□□□ 0.22
U2AF1-210ENST00000478282 GALNT17Q6IS24 598 aa16.41■□□□□ 0.22
U2AF1-210ENST00000478282 PRR5LQ6MZQ0 368 aa16.41■□□□□ 0.22
U2AF1-210ENST00000478282 CASKIN2Q8WXE0 1202 aa16.41■□□□□ 0.22
U2AF1-210ENST00000478282 CCT8L2Q96SF2 557 aa16.41■□□□□ 0.22
U2AF1-210ENST00000478282 LRRC37AA6NMS7 1700 aa16.41■□□□□ 0.22
U2AF1-210ENST00000478282 COL11A2P13942 1736 aaPredicted RBP16.41■□□□□ 0.22
U2AF1-210ENST00000478282 OR52Z1P0C646 297 aa16.4■□□□□ 0.22
U2AF1-210ENST00000478282 C3orf67Q6ZVT6 689 aa16.4■□□□□ 0.22
U2AF1-210ENST00000478282 VCPKMTQ9H867 229 aa16.4■□□□□ 0.22
U2AF1-210ENST00000478282 SLC39A2Q9NP94 309 aa16.4■□□□□ 0.22
U2AF1-210ENST00000478282 GRID2IPA4D2P6 1211 aa16.4■□□□□ 0.22
U2AF1-210ENST00000478282 RBAK-RBAKDNI3L0D1 243 aa16.4■□□□□ 0.22
U2AF1-210ENST00000478282 CRY2Q49AN0 593 aa16.4■□□□□ 0.22
U2AF1-210ENST00000478282 NBPF5PQ86XG9 351 aaPredicted RBP16.4■□□□□ 0.22
U2AF1-210ENST00000478282 STAG2Q8N3U4 1231 aa16.4■□□□□ 0.22
U2AF1-210ENST00000478282 EDEM3Q9BZQ6 932 aa16.4■□□□□ 0.22
U2AF1-210ENST00000478282 DCP1AQ9NPI6 582 aaPredicted RBP16.4■□□□□ 0.22
U2AF1-210ENST00000478282 KIAA1551Q9HCM1 1747 aa16.4■□□□□ 0.22
U2AF1-210ENST00000478282 HDLBPQ00341 1268 aaKnown RBP16.4■□□□□ 0.22
U2AF1-210ENST00000478282 HGSNATQ68CP4 663 aa16.4■□□□□ 0.22
U2AF1-210ENST00000478282 SLC16A10Q8TF71 515 aa16.4■□□□□ 0.22
U2AF1-210ENST00000478282 TAF1P21675 1872 aa16.4■□□□□ 0.22
U2AF1-210ENST00000478282 FGFR1OPO95684 399 aaKnown RBP16.39■□□□□ 0.21
U2AF1-210ENST00000478282 FAM107AO95990 144 aa16.39■□□□□ 0.21
U2AF1-210ENST00000478282 SERPINB2P05120 415 aa16.39■□□□□ 0.21
U2AF1-210ENST00000478282 SEC24CP53992 1094 aa16.39■□□□□ 0.21
U2AF1-210ENST00000478282 ACTN3Q08043 901 aaPredicted RBP16.39■□□□□ 0.21
U2AF1-210ENST00000478282 ITGB3BPQ13352 177 aaPredicted RBP16.39■□□□□ 0.21
U2AF1-210ENST00000478282 PLCB4Q15147 1175 aa16.39■□□□□ 0.21
U2AF1-210ENST00000478282 KRT12Q99456 494 aa16.39■□□□□ 0.21
U2AF1-210ENST00000478282 CYP2D6P10635 497 aa16.39■□□□□ 0.21
U2AF1-210ENST00000478282 RNF187Q5TA31 235 aaPredicted RBP16.39■□□□□ 0.21
U2AF1-210ENST00000478282 BICDL1Q6ZP65 573 aa16.39■□□□□ 0.21
U2AF1-210ENST00000478282 CACNA2D4Q7Z3S7 1137 aa16.39■□□□□ 0.21
U2AF1-210ENST00000478282 STXBP3O00186 592 aa16.39■□□□□ 0.21
U2AF1-210ENST00000478282 PALMO75781 387 aa16.39■□□□□ 0.21
U2AF1-210ENST00000478282 ATP2B2Q01814 1243 aa16.39■□□□□ 0.21
U2AF1-210ENST00000478282 TDRD12Q587J7 1177 aaKnown RBP16.39■□□□□ 0.21
U2AF1-210ENST00000478282 TMC4Q7Z404 712 aa16.39■□□□□ 0.21
U2AF1-210ENST00000478282 HEATR3Q7Z4Q2 680 aa16.39■□□□□ 0.21
U2AF1-210ENST00000478282 RPAINQ86UA6 219 aa16.39■□□□□ 0.21
U2AF1-210ENST00000478282 PNMA1Q8ND90 353 aa16.39■□□□□ 0.21
U2AF1-210ENST00000478282 HSPA9P38646 679 aaKnown RBP16.38■□□□□ 0.21
U2AF1-210ENST00000478282 GRM4Q14833 912 aa16.38■□□□□ 0.21
U2AF1-210ENST00000478282 PPP4R3AQ6IN85 833 aa16.38■□□□□ 0.21
U2AF1-210ENST00000478282 INPP4AQ96PE3 977 aaPredicted RBP16.38■□□□□ 0.21
U2AF1-210ENST00000478282 CRNKL1Q9BZJ0 848 aaKnown RBP16.38■□□□□ 0.21
U2AF1-210ENST00000478282 BARHL2Q9NY43 387 aa16.38■□□□□ 0.21
U2AF1-210ENST00000478282 ARPP21Q9UBL0 812 aaPredicted RBP16.38■□□□□ 0.21
U2AF1-210ENST00000478282 PLAAQ9Y263 795 aa16.38■□□□□ 0.21
U2AF1-210ENST00000478282 GNAQP50148 359 aa16.38■□□□□ 0.21
U2AF1-210ENST00000478282 SMTNP53814 917 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms