RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 NEK4P51957 841 aa17.86■□□□□ 0.45
HMGA1-206ENST00000478214 SSRP1Q08945 709 aaKnown RBP17.86■□□□□ 0.45
HMGA1-206ENST00000478214 SCRN1Q12765 414 aa17.86■□□□□ 0.45
HMGA1-206ENST00000478214 ANKRD1Q15327 319 aa17.86■□□□□ 0.45
HMGA1-206ENST00000478214 HABP4Q5JVS0 413 aaKnown RBP17.86■□□□□ 0.45
HMGA1-206ENST00000478214 CELF3Q5SZQ8 465 aaKnown RBP17.86■□□□□ 0.45
HMGA1-206ENST00000478214 MYSM1Q5VVJ2 828 aa17.86■□□□□ 0.45
HMGA1-206ENST00000478214 TEX2Q8IWB9 1127 aa17.86■□□□□ 0.45
HMGA1-206ENST00000478214 ZMYND12Q9H0C1 365 aa17.86■□□□□ 0.45
HMGA1-206ENST00000478214 GLT8D2Q9H1C3 349 aa17.86■□□□□ 0.45
HMGA1-206ENST00000478214 SLKQ9H2G2 1235 aaPredicted RBP17.86■□□□□ 0.45
HMGA1-206ENST00000478214 TMEM39AQ9NV64 488 aa17.86■□□□□ 0.45
HMGA1-206ENST00000478214 MROH7Q68CQ1 1323 aa17.86■□□□□ 0.45
HMGA1-206ENST00000478214 KIAA1217Q5T5P2 1943 aa17.86■□□□□ 0.45
HMGA1-206ENST00000478214 TRIOBPQ9H2D6 2365 aa17.86■□□□□ 0.45
HMGA1-206ENST00000478214 ESYT2A0FGR8 921 aa17.85■□□□□ 0.45
HMGA1-206ENST00000478214 FIBPO43427 364 aa17.85■□□□□ 0.45
HMGA1-206ENST00000478214 PFKFB2O60825 505 aa17.85■□□□□ 0.45
HMGA1-206ENST00000478214 FOSP01100 380 aaPredicted RBP17.85■□□□□ 0.45
HMGA1-206ENST00000478214 JAKMIP3Q5VZ66 844 aa17.85■□□□□ 0.45
HMGA1-206ENST00000478214 CPLX2Q6PUV4 134 aaKnown RBP17.85■□□□□ 0.45
HMGA1-206ENST00000478214 FAM126BQ8IXS8 530 aa17.85■□□□□ 0.45
HMGA1-206ENST00000478214 TRIM22Q8IYM9 498 aa17.85■□□□□ 0.45
HMGA1-206ENST00000478214 PPTC7Q8NI37 304 aa17.85■□□□□ 0.45
HMGA1-206ENST00000478214 CCDC12Q8WUD4 166 aaPredicted RBP17.85■□□□□ 0.45
HMGA1-206ENST00000478214 PPP1R13LQ8WUF5 828 aa17.85■□□□□ 0.45
HMGA1-206ENST00000478214 SPATA33Q96N06 139 aa17.85■□□□□ 0.45
HMGA1-206ENST00000478214 LBHD1Q9BQE6 289 aaPredicted RBP17.85■□□□□ 0.45
HMGA1-206ENST00000478214 ANO3Q9BYT9 981 aa17.85■□□□□ 0.45
HMGA1-206ENST00000478214 EHMT1Q9H9B1 1298 aa17.85■□□□□ 0.45
HMGA1-206ENST00000478214 C6orf50Q9HD87 102 aa17.85■□□□□ 0.45
HMGA1-206ENST00000478214 VPS54Q9P1Q0 977 aa17.85■□□□□ 0.45
HMGA1-206ENST00000478214 KIAA0355O15063 1070 aa17.84■□□□□ 0.45
HMGA1-206ENST00000478214 DTNBO60941 627 aa17.84■□□□□ 0.45
HMGA1-206ENST00000478214 ITGB5P18084 799 aa17.84■□□□□ 0.45
HMGA1-206ENST00000478214 ITGB8P26012 769 aa17.84■□□□□ 0.45
HMGA1-206ENST00000478214 AP3B2Q13367 1082 aa17.84■□□□□ 0.45
HMGA1-206ENST00000478214 NBPF20Q3BBV1 942 aa17.84■□□□□ 0.45
HMGA1-206ENST00000478214 HSDL1Q3SXM5 330 aa17.84■□□□□ 0.45
HMGA1-206ENST00000478214 NLRX1Q86UT6 975 aa17.84■□□□□ 0.45
HMGA1-206ENST00000478214 MLXIPQ9HAP2 919 aa17.84■□□□□ 0.45
HMGA1-206ENST00000478214 TBX21Q9UL17 535 aa17.84■□□□□ 0.45
HMGA1-206ENST00000478214 UBIAD1Q9Y5Z9 338 aa17.84■□□□□ 0.45
HMGA1-206ENST00000478214 TLR3O15455 904 aaKnown RBP17.83■□□□□ 0.44
HMGA1-206ENST00000478214 LARGE1O95461 756 aa17.83■□□□□ 0.44
HMGA1-206ENST00000478214 CD4P01730 458 aa17.83■□□□□ 0.44
HMGA1-206ENST00000478214 BMP8BP34820 402 aa17.83■□□□□ 0.44
HMGA1-206ENST00000478214 CHMP4BP1P59074 171 aa17.83■□□□□ 0.44
HMGA1-206ENST00000478214 DGKDQ16760 1214 aa17.83■□□□□ 0.44
HMGA1-206ENST00000478214 ME3Q16798 604 aa17.83■□□□□ 0.44
HMGA1-206ENST00000478214 CYFIP1Q7L576 1253 aa17.83■□□□□ 0.44
HMGA1-206ENST00000478214 NECAB1Q8N987 351 aa17.83■□□□□ 0.44
HMGA1-206ENST00000478214 CCDC148Q8NFR7 591 aa17.83■□□□□ 0.44
HMGA1-206ENST00000478214 KAT2BQ92831 832 aa17.83■□□□□ 0.44
HMGA1-206ENST00000478214 BADQ92934 168 aa17.83■□□□□ 0.44
HMGA1-206ENST00000478214 GPRASP2Q96D09 838 aa17.83■□□□□ 0.44
HMGA1-206ENST00000478214 AIFM3Q96NN9 605 aa17.83■□□□□ 0.44
HMGA1-206ENST00000478214 SEZ6LQ9BYH1 1024 aa17.83■□□□□ 0.44
HMGA1-206ENST00000478214 UBE2OQ9C0C9 1292 aaKnown RBP17.83■□□□□ 0.44
HMGA1-206ENST00000478214 TRPV6Q9H1D0 765 aa17.83■□□□□ 0.44
HMGA1-206ENST00000478214 B4GALT4O60513 344 aa17.82■□□□□ 0.44
HMGA1-206ENST00000478214 DEXIO95424 95 aa17.82■□□□□ 0.44
HMGA1-206ENST00000478214 RAG1P15918 1043 aa17.82■□□□□ 0.44
HMGA1-206ENST00000478214 GNA11P29992 359 aa17.82■□□□□ 0.44
HMGA1-206ENST00000478214 SREBF1P36956 1147 aa17.82■□□□□ 0.44
HMGA1-206ENST00000478214 NEDD9Q14511 834 aa17.82■□□□□ 0.44
HMGA1-206ENST00000478214 FAM47CQ5HY64 1035 aa17.82■□□□□ 0.44
HMGA1-206ENST00000478214 REXO1Q8N1G1 1221 aaKnown RBP17.82■□□□□ 0.44
HMGA1-206ENST00000478214 RASGRP4Q8TDF6 673 aa17.82■□□□□ 0.44
HMGA1-206ENST00000478214 KIF2CQ99661 725 aa17.82■□□□□ 0.44
HMGA1-206ENST00000478214 C22orf23Q9BZE7 217 aa17.82■□□□□ 0.44
HMGA1-206ENST00000478214 JADE2Q9NQC1 790 aa17.82■□□□□ 0.44
HMGA1-206ENST00000478214 ATP9AO75110 1047 aa17.81■□□□□ 0.44
HMGA1-206ENST00000478214 PPFIA4O75335 1185 aa17.81■□□□□ 0.44
HMGA1-206ENST00000478214 CDKL5O76039 1030 aa17.81■□□□□ 0.44
HMGA1-206ENST00000478214 CTDNEP1O95476 244 aa17.81■□□□□ 0.44
HMGA1-206ENST00000478214 ZNF286BP0CG31 522 aa17.81■□□□□ 0.44
HMGA1-206ENST00000478214 HOXD8P13378 290 aaPredicted RBP17.81■□□□□ 0.44
HMGA1-206ENST00000478214 NLRP5P59047 1200 aa17.81■□□□□ 0.44
HMGA1-206ENST00000478214 MTMR1Q13613 665 aa17.81■□□□□ 0.44
HMGA1-206ENST00000478214 METTL7BQ6UX53 244 aa17.81■□□□□ 0.44
HMGA1-206ENST00000478214 CYP2W1Q8TAV3 490 aa17.81■□□□□ 0.44
HMGA1-206ENST00000478214 CDHR1Q96JP9 859 aa17.81■□□□□ 0.44
HMGA1-206ENST00000478214 SENP7Q9BQF6 1050 aa17.81■□□□□ 0.44
HMGA1-206ENST00000478214 MXRA8Q9BRK3 442 aa17.81■□□□□ 0.44
HMGA1-206ENST00000478214 SH3GLB2Q9NR46 395 aa17.81■□□□□ 0.44
HMGA1-206ENST00000478214 TRMT13Q9NUP7 481 aaKnown RBP17.81■□□□□ 0.44
HMGA1-206ENST00000478214 PKD2L1Q9P0L9 805 aa17.81■□□□□ 0.44
HMGA1-206ENST00000478214 TELO2Q9Y4R8 837 aa17.81■□□□□ 0.44
HMGA1-206ENST00000478214 KCNA2P16389 499 aa17.8■□□□□ 0.44
HMGA1-206ENST00000478214 PSEN2P49810 448 aa17.8■□□□□ 0.44
HMGA1-206ENST00000478214 ARHGAP4P98171 946 aa17.8■□□□□ 0.44
HMGA1-206ENST00000478214 SP4Q02446 784 aa17.8■□□□□ 0.44
HMGA1-206ENST00000478214 CEP55Q53EZ4 464 aa17.8■□□□□ 0.44
HMGA1-206ENST00000478214 NFRKBQ6P4R8 1299 aa17.8■□□□□ 0.44
HMGA1-206ENST00000478214 BICD2Q8TD16 824 aa17.8■□□□□ 0.44
HMGA1-206ENST00000478214 GTF3C6Q969F1 213 aa17.8■□□□□ 0.44
HMGA1-206ENST00000478214 PPP1R12CQ9BZL4 782 aa17.8■□□□□ 0.44
HMGA1-206ENST00000478214 SCN10AQ9Y5Y9 1956 aa17.8■□□□□ 0.44
HMGA1-206ENST00000478214 STK36Q9NRP7 1315 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms