RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 GRK2P25098 689 aa6.65□□□□□ -1.34
SMNDC1-205ENST00000477763 GRK3P35626 688 aa6.65□□□□□ -1.34
SMNDC1-205ENST00000477763 TRIM61Q5EBN2 209 aa6.65□□□□□ -1.34
SMNDC1-205ENST00000477763 CYP4F22Q6NT55 531 aa6.65□□□□□ -1.34
SMNDC1-205ENST00000477763 SPOCD1Q6ZMY3 1216 aa6.65□□□□□ -1.34
SMNDC1-205ENST00000477763 KIAA0907Q7Z7F0 614 aaPredicted RBP6.65□□□□□ -1.34
SMNDC1-205ENST00000477763 IGDCC3Q8IVU1 814 aa6.65□□□□□ -1.34
SMNDC1-205ENST00000477763 CPA5Q8WXQ8 436 aa6.65□□□□□ -1.34
SMNDC1-205ENST00000477763 ALG3Q92685 438 aa6.65□□□□□ -1.34
SMNDC1-205ENST00000477763 ALG1Q9BT22 464 aa6.65□□□□□ -1.34
SMNDC1-205ENST00000477763 MRPL4Q9BYD3 311 aaKnown RBP6.65□□□□□ -1.34
SMNDC1-205ENST00000477763 RXFP1Q9HBX9 757 aa6.65□□□□□ -1.34
SMNDC1-205ENST00000477763 SMG5Q9UPR3 1016 aaKnown RBP6.65□□□□□ -1.34
SMNDC1-205ENST00000477763 ZNF652Q9Y2D9 606 aa6.65□□□□□ -1.34
SMNDC1-205ENST00000477763 WNT9AO14904 365 aa6.64□□□□□ -1.35
SMNDC1-205ENST00000477763 HGSO14964 777 aaPredicted RBP6.64□□□□□ -1.35
SMNDC1-205ENST00000477763 PPP1R12AO14974 1030 aaPredicted RBP6.64□□□□□ -1.35
SMNDC1-205ENST00000477763 KCNQ2O43526 872 aa6.64□□□□□ -1.35
SMNDC1-205ENST00000477763 NCAM1P13591 858 aa6.64□□□□□ -1.35
SMNDC1-205ENST00000477763 IGFBP6P24592 240 aaPredicted RBP6.64□□□□□ -1.35
SMNDC1-205ENST00000477763 EPHB3P54753 998 aa6.64□□□□□ -1.35
SMNDC1-205ENST00000477763 KCNA10Q16322 511 aa6.64□□□□□ -1.35
SMNDC1-205ENST00000477763 CILP2Q8IUL8 1156 aa6.64□□□□□ -1.35
SMNDC1-205ENST00000477763 GSTCDQ8NEC7 633 aa6.64□□□□□ -1.35
SMNDC1-205ENST00000477763 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.64□□□□□ -1.35
SMNDC1-205ENST00000477763 TMX1Q9H3N1 280 aa6.64□□□□□ -1.35
SMNDC1-205ENST00000477763 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.64□□□□□ -1.35
SMNDC1-205ENST00000477763 SIT1Q9Y3P8 196 aa6.64□□□□□ -1.35
SMNDC1-205ENST00000477763 TRAF6Q9Y4K3 522 aa6.64□□□□□ -1.35
SMNDC1-205ENST00000477763 IRAK3Q9Y616 596 aa6.64□□□□□ -1.35
SMNDC1-205ENST00000477763 SBNO2Q9Y2G9 1366 aa6.64□□□□□ -1.35
SMNDC1-205ENST00000477763 FAM47E-STBD1D6RA91 191 aa6.63□□□□□ -1.35
SMNDC1-205ENST00000477763 PLD2O14939 933 aa6.63□□□□□ -1.35
SMNDC1-205ENST00000477763 MAFKO60675 156 aa6.63□□□□□ -1.35
SMNDC1-205ENST00000477763 TADA3O75528 432 aa6.63□□□□□ -1.35
SMNDC1-205ENST00000477763 SOD2P04179 222 aa6.63□□□□□ -1.35
SMNDC1-205ENST00000477763 APPP05067 770 aa6.63□□□□□ -1.35
SMNDC1-205ENST00000477763 ASGR2P07307 311 aa6.63□□□□□ -1.35
SMNDC1-205ENST00000477763 NCLP19338 710 aaKnown RBP6.63□□□□□ -1.35
SMNDC1-205ENST00000477763 LINC00310P59036 64 aa6.63□□□□□ -1.35
SMNDC1-205ENST00000477763 FBLN7Q53RD9 439 aa6.63□□□□□ -1.35
SMNDC1-205ENST00000477763 STEAP3Q658P3 488 aa6.63□□□□□ -1.35
SMNDC1-205ENST00000477763 AMIGO3Q86WK7 504 aa6.63□□□□□ -1.35
SMNDC1-205ENST00000477763 MIB1Q86YT6 1006 aa6.63□□□□□ -1.35
SMNDC1-205ENST00000477763 PHOSPHO1Q8TCT1 267 aa6.63□□□□□ -1.35
SMNDC1-205ENST00000477763 PALD1Q9ULE6 856 aa6.63□□□□□ -1.35
SMNDC1-205ENST00000477763 ANKRD62A6NC57 917 aa6.62□□□□□ -1.35
SMNDC1-205ENST00000477763 ARVCFO00192 962 aa6.62□□□□□ -1.35
SMNDC1-205ENST00000477763 RFXAPO00287 272 aa6.62□□□□□ -1.35
SMNDC1-205ENST00000477763 KRIT1O00522 736 aa6.62□□□□□ -1.35
SMNDC1-205ENST00000477763 BUB1BO60566 1050 aaPredicted RBP6.62□□□□□ -1.35
SMNDC1-205ENST00000477763 PMLP29590 882 aa6.62□□□□□ -1.35
SMNDC1-205ENST00000477763 GYS2P54840 703 aa6.62□□□□□ -1.35
SMNDC1-205ENST00000477763 SPIRE1Q08AE8 756 aa6.62□□□□□ -1.35
SMNDC1-205ENST00000477763 PAK1Q13153 545 aa6.62□□□□□ -1.35
SMNDC1-205ENST00000477763 FNDC3BQ53EP0 1204 aaKnown RBP6.62□□□□□ -1.35
SMNDC1-205ENST00000477763 HABP4Q5JVS0 413 aaKnown RBP6.62□□□□□ -1.35
SMNDC1-205ENST00000477763 RNF187Q5TA31 235 aaPredicted RBP6.62□□□□□ -1.35
SMNDC1-205ENST00000477763 MILR1Q7Z6M3 343 aa6.62□□□□□ -1.35
SMNDC1-205ENST00000477763 MTDHQ86UE4 582 aaKnown RBP6.62□□□□□ -1.35
SMNDC1-205ENST00000477763 TOX2Q96NM4 488 aa6.62□□□□□ -1.35
SMNDC1-205ENST00000477763 JAM3Q9BX67 310 aa6.62□□□□□ -1.35
SMNDC1-205ENST00000477763 SMOC1Q9H4F8 434 aa6.62□□□□□ -1.35
SMNDC1-205ENST00000477763 SLC52A2Q9HAB3 445 aa6.62□□□□□ -1.35
SMNDC1-205ENST00000477763 NCOA5Q9HCD5 579 aaKnown RBP6.62□□□□□ -1.35
SMNDC1-205ENST00000477763 SLC6A20Q9NP91 592 aa6.62□□□□□ -1.35
SMNDC1-205ENST00000477763 PPARGC1AQ9UBK2 798 aaKnown RBP6.62□□□□□ -1.35
SMNDC1-205ENST00000477763 SFMBT1Q9UHJ3 866 aa6.62□□□□□ -1.35
SMNDC1-205ENST00000477763 CNOT6Q9ULM6 557 aaKnown RBP6.62□□□□□ -1.35
SMNDC1-205ENST00000477763 PLAAQ9Y263 795 aa6.62□□□□□ -1.35
SMNDC1-205ENST00000477763 NPIPB6E9PJ23 425 aa6.61□□□□□ -1.35
SMNDC1-205ENST00000477763 RFPL3O75679 317 aa6.61□□□□□ -1.35
SMNDC1-205ENST00000477763 GUCY1A3Q02108 690 aa6.61□□□□□ -1.35
SMNDC1-205ENST00000477763 CACNB2Q08289 660 aaPredicted RBP6.61□□□□□ -1.35
SMNDC1-205ENST00000477763 TKFCQ3LXA3 575 aa6.61□□□□□ -1.35
SMNDC1-205ENST00000477763 ZNF385BQ569K4 471 aa6.61□□□□□ -1.35
SMNDC1-205ENST00000477763 ZNF662Q6ZS27 426 aa6.61□□□□□ -1.35
SMNDC1-205ENST00000477763 OTOP3Q7RTS5 596 aa6.61□□□□□ -1.35
SMNDC1-205ENST00000477763 B3GNT8Q7Z7M8 397 aa6.61□□□□□ -1.35
SMNDC1-205ENST00000477763 TMEFF1Q8IYR6 380 aa6.61□□□□□ -1.35
SMNDC1-205ENST00000477763 PDGFDQ9GZP0 370 aaPredicted RBP6.61□□□□□ -1.35
SMNDC1-205ENST00000477763 NDOR1Q9UHB4 597 aa6.61□□□□□ -1.35
SMNDC1-205ENST00000477763 PLA2G2DQ9UNK4 145 aa6.61□□□□□ -1.35
SMNDC1-205ENST00000477763 KCTD3Q9Y597 815 aa6.61□□□□□ -1.35
SMNDC1-205ENST00000477763 NUB1Q9Y5A7 615 aa6.61□□□□□ -1.35
SMNDC1-205ENST00000477763 CD2APQ9Y5K6 639 aa6.61□□□□□ -1.35
SMNDC1-205ENST00000477763 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.6□□□□□ -1.35
SMNDC1-205ENST00000477763 RAPGEF3O95398 923 aa6.6□□□□□ -1.35
SMNDC1-205ENST00000477763 ATF2P15336 505 aa6.6□□□□□ -1.35
SMNDC1-205ENST00000477763 NCKAP1LP55160 1127 aa6.6□□□□□ -1.35
SMNDC1-205ENST00000477763 CAP1Q01518 475 aa6.6□□□□□ -1.35
SMNDC1-205ENST00000477763 SSPNQ14714 243 aa6.6□□□□□ -1.35
SMNDC1-205ENST00000477763 ETV3LQ6ZN32 361 aa6.6□□□□□ -1.35
SMNDC1-205ENST00000477763 FAM126BQ8IXS8 530 aa6.6□□□□□ -1.35
SMNDC1-205ENST00000477763 PCDH19Q8TAB3 1148 aa6.6□□□□□ -1.35
SMNDC1-205ENST00000477763 SLC7A14Q8TBB6 771 aa6.6□□□□□ -1.35
SMNDC1-205ENST00000477763 IPPKQ9H8X2 491 aa6.6□□□□□ -1.35
SMNDC1-205ENST00000477763 PCDH18Q9HCL0 1135 aa6.6□□□□□ -1.35
SMNDC1-205ENST00000477763 NGRNQ9NPE2 291 aaKnown RBP6.6□□□□□ -1.35
SMNDC1-205ENST00000477763 MYOTQ9UBF9 498 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms