RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 TNIP1Q15025 636 aa5.99□□□□□ -1.45
CKS1B-207ENST00000477676 SF3B3Q15393 1217 aaKnown RBP5.99□□□□□ -1.45
CKS1B-207ENST00000477676 RGMBQ6NW40 437 aa5.99□□□□□ -1.45
CKS1B-207ENST00000477676 DDX46Q7L014 1031 aaKnown RBP5.99□□□□□ -1.45
CKS1B-207ENST00000477676 KRT26Q7Z3Y9 468 aa5.99□□□□□ -1.45
CKS1B-207ENST00000477676 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.99□□□□□ -1.45
CKS1B-207ENST00000477676 SUPT20HQ8NEM7 779 aa5.99□□□□□ -1.45
CKS1B-207ENST00000477676 DPF2Q92785 391 aa5.99□□□□□ -1.45
CKS1B-207ENST00000477676 ISL2Q96A47 359 aa5.99□□□□□ -1.45
CKS1B-207ENST00000477676 FAM89AQ96GI7 184 aa5.99□□□□□ -1.45
CKS1B-207ENST00000477676 CSRNP1Q96S65 589 aa5.99□□□□□ -1.45
CKS1B-207ENST00000477676 RNF186Q9NXI6 227 aa5.99□□□□□ -1.45
CKS1B-207ENST00000477676 CHPF2Q9P2E5 772 aa5.99□□□□□ -1.45
CKS1B-207ENST00000477676 GTF2IRD1Q9UHL9 959 aa5.99□□□□□ -1.45
CKS1B-207ENST00000477676 TRMT112Q9UI30 125 aaKnown RBP5.99□□□□□ -1.45
CKS1B-207ENST00000477676 SCAF8Q9UPN6 1271 aaKnown RBP5.99□□□□□ -1.45
CKS1B-207ENST00000477676 SMG5Q9UPR3 1016 aaKnown RBP5.99□□□□□ -1.45
CKS1B-207ENST00000477676 TRIOBPQ9H2D6 2365 aa5.99□□□□□ -1.45
CKS1B-207ENST00000477676 SH3TC1Q8TE82 1336 aa5.99□□□□□ -1.45
CKS1B-207ENST00000477676 PITPNM2Q9BZ72 1349 aa5.99□□□□□ -1.45
CKS1B-207ENST00000477676 LAMA2P24043 3122 aaKnown RBP5.98□□□□□ -1.45
CKS1B-207ENST00000477676 H7C1D1 291 aa5.98□□□□□ -1.45
CKS1B-207ENST00000477676 CHL1O00533 1208 aa5.98□□□□□ -1.45
CKS1B-207ENST00000477676 ECE2O60344 883 aa5.98□□□□□ -1.45
CKS1B-207ENST00000477676 VIL1P09327 827 aaKnown RBP5.98□□□□□ -1.45
CKS1B-207ENST00000477676 MED14OSP0DP75 135 aa5.98□□□□□ -1.45
CKS1B-207ENST00000477676 GDNFP39905 211 aa5.98□□□□□ -1.45
CKS1B-207ENST00000477676 FCGRTP55899 365 aa5.98□□□□□ -1.45
CKS1B-207ENST00000477676 MOB2Q70IA6 237 aa5.98□□□□□ -1.45
CKS1B-207ENST00000477676 TBC1D16Q8TBP0 767 aa5.98□□□□□ -1.45
CKS1B-207ENST00000477676 ALKBH8Q96BT7 664 aaKnown RBP5.98□□□□□ -1.45
CKS1B-207ENST00000477676 GMLQ99445 158 aa5.98□□□□□ -1.45
CKS1B-207ENST00000477676 CARS2Q9HA77 564 aaKnown RBP5.98□□□□□ -1.45
CKS1B-207ENST00000477676 GBA2Q9HCG7 927 aaPredicted RBP5.98□□□□□ -1.45
CKS1B-207ENST00000477676 DCP1AQ9NPI6 582 aaPredicted RBP5.98□□□□□ -1.45
CKS1B-207ENST00000477676 CARNS1A5YM72 827 aa5.97□□□□□ -1.45
CKS1B-207ENST00000477676 TCAF2A6NFQ2 919 aa5.97□□□□□ -1.45
CKS1B-207ENST00000477676 ETV2O00321 342 aaPredicted RBP5.97□□□□□ -1.45
CKS1B-207ENST00000477676 NUAK1O60285 661 aa5.97□□□□□ -1.45
CKS1B-207ENST00000477676 GRM2Q14416 872 aa5.97□□□□□ -1.45
CKS1B-207ENST00000477676 HSP90AB3PQ58FF7 597 aa5.97□□□□□ -1.45
CKS1B-207ENST00000477676 RASAL3Q86YV0 1011 aa5.97□□□□□ -1.45
CKS1B-207ENST00000477676 CCDC146Q8IYE0 955 aa5.97□□□□□ -1.45
CKS1B-207ENST00000477676 JARID2Q92833 1246 aaPredicted RBP5.97□□□□□ -1.45
CKS1B-207ENST00000477676 CDCA5Q96FF9 252 aa5.97□□□□□ -1.45
CKS1B-207ENST00000477676 RBCK1Q9BYM8 510 aa5.97□□□□□ -1.45
CKS1B-207ENST00000477676 R3HDMLQ9H3Y0 253 aa5.97□□□□□ -1.45
CKS1B-207ENST00000477676 BABAM1Q9NWV8 329 aa5.97□□□□□ -1.45
CKS1B-207ENST00000477676 SAGE1Q9NXZ1 904 aa5.97□□□□□ -1.45
CKS1B-207ENST00000477676 GGA3Q9NZ52 723 aa5.97□□□□□ -1.45
CKS1B-207ENST00000477676 RBBP6Q7Z6E9 1792 aaKnown RBP5.97□□□□□ -1.45
CKS1B-207ENST00000477676 ZNF609O15014 1411 aa5.97□□□□□ -1.45
CKS1B-207ENST00000477676 MAPK8IP3Q9UPT6 1336 aa5.97□□□□□ -1.45
CKS1B-207ENST00000477676 CACNA1FO60840 1977 aa5.97□□□□□ -1.45
CKS1B-207ENST00000477676 OTOFQ9HC10 1997 aa5.97□□□□□ -1.45
CKS1B-207ENST00000477676 IRS4O14654 1257 aaPredicted RBP5.96□□□□□ -1.46
CKS1B-207ENST00000477676 RPS12P25398 132 aaKnown RBP5.96□□□□□ -1.46
CKS1B-207ENST00000477676 ARNTP27540 789 aa5.96□□□□□ -1.46
CKS1B-207ENST00000477676 ZNF280AP59817 542 aaPredicted RBP5.96□□□□□ -1.46
CKS1B-207ENST00000477676 RPS8P62241 208 aaKnown RBP5.96□□□□□ -1.46
CKS1B-207ENST00000477676 ERVK-24P63145 666 aa5.96□□□□□ -1.46
CKS1B-207ENST00000477676 PRAMEF18Q5VWM3 479 aa5.96□□□□□ -1.46
CKS1B-207ENST00000477676 TMC4Q7Z404 712 aa5.96□□□□□ -1.46
CKS1B-207ENST00000477676 SULF2Q8IWU5 870 aa5.96□□□□□ -1.46
CKS1B-207ENST00000477676 C2orf69Q8N8R5 385 aa5.96□□□□□ -1.46
CKS1B-207ENST00000477676 KCT2Q8NC54 265 aa5.96□□□□□ -1.46
CKS1B-207ENST00000477676 RNF214Q8ND24 703 aa5.96□□□□□ -1.46
CKS1B-207ENST00000477676 PLBD2Q8NHP8 589 aa5.96□□□□□ -1.46
CKS1B-207ENST00000477676 MXD3Q9BW11 206 aa5.96□□□□□ -1.46
CKS1B-207ENST00000477676 CEP44Q9C0F1 390 aa5.96□□□□□ -1.46
CKS1B-207ENST00000477676 EPB41L4BQ9H329 900 aa5.96□□□□□ -1.46
CKS1B-207ENST00000477676 CBX8Q9HC52 389 aa5.96□□□□□ -1.46
CKS1B-207ENST00000477676 PARD6AQ9NPB6 346 aa5.96□□□□□ -1.46
CKS1B-207ENST00000477676 PODXL2Q9NZ53 605 aa5.96□□□□□ -1.46
CKS1B-207ENST00000477676 AKAP2Q9Y2D5 859 aa5.96□□□□□ -1.46
CKS1B-207ENST00000477676 ZSWIM8A7E2V4 1837 aa5.95□□□□□ -1.46
CKS1B-207ENST00000477676 UBE2Q2LH0YL09 131 aa5.95□□□□□ -1.46
CKS1B-207ENST00000477676 FOXD2O60548 495 aaPredicted RBP5.95□□□□□ -1.46
CKS1B-207ENST00000477676 NME2P22392 152 aa5.95□□□□□ -1.46
CKS1B-207ENST00000477676 GLDCP23378 1020 aa5.95□□□□□ -1.46
CKS1B-207ENST00000477676 CLCN7P51798 805 aa5.95□□□□□ -1.46
CKS1B-207ENST00000477676 FAAP100Q0VG06 881 aa5.95□□□□□ -1.46
CKS1B-207ENST00000477676 NBPF9Q3BBW0 867 aa5.95□□□□□ -1.46
CKS1B-207ENST00000477676 DBX2Q6ZNG2 339 aa5.95□□□□□ -1.46
CKS1B-207ENST00000477676 KCNN1Q92952 543 aa5.95□□□□□ -1.46
CKS1B-207ENST00000477676 DCPSQ96C86 337 aaKnown RBP5.95□□□□□ -1.46
CKS1B-207ENST00000477676 SRCIN1Q9C0H9 1055 aa5.95□□□□□ -1.46
CKS1B-207ENST00000477676 IRF2BPLQ9H1B7 796 aa5.95□□□□□ -1.46
CKS1B-207ENST00000477676 TMX4Q9H1E5 349 aaPredicted RBP5.95□□□□□ -1.46
CKS1B-207ENST00000477676 PHAXQ9H814 394 aaKnown RBP5.95□□□□□ -1.46
CKS1B-207ENST00000477676 BIN2Q9UBW5 565 aaPredicted RBP5.95□□□□□ -1.46
CKS1B-207ENST00000477676 DNAH12Q6ZR08 3092 aa5.94□□□□□ -1.46
CKS1B-207ENST00000477676 UFL1O94874 794 aa5.94□□□□□ -1.46
CKS1B-207ENST00000477676 TBC1D8O95759 1140 aa5.94□□□□□ -1.46
CKS1B-207ENST00000477676 ZNF853P0CG23 659 aa5.94□□□□□ -1.46
CKS1B-207ENST00000477676 LINC00310P59036 64 aa5.94□□□□□ -1.46
CKS1B-207ENST00000477676 CAP1Q01518 475 aa5.94□□□□□ -1.46
CKS1B-207ENST00000477676 PLCB3Q01970 1234 aa5.94□□□□□ -1.46
CKS1B-207ENST00000477676 LRRC14Q15048 493 aa5.94□□□□□ -1.46
CKS1B-207ENST00000477676 CTU1Q7Z7A3 348 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms