RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 AOPEPQ8N6M6 819 aa7.5□□□□□ -1.21
LDB3-206ENST00000477489 RASGRP4Q8TDF6 673 aa7.5□□□□□ -1.21
LDB3-206ENST00000477489 CRYGNQ8WXF5 182 aa7.5□□□□□ -1.21
LDB3-206ENST00000477489 COA7Q96BR5 231 aa7.5□□□□□ -1.21
LDB3-206ENST00000477489 FAM20AQ96MK3 541 aa7.5□□□□□ -1.21
LDB3-206ENST00000477489 CTAGE1Q96RT6 745 aa7.5□□□□□ -1.21
LDB3-206ENST00000477489 ZNF341Q9BYN7 854 aa7.5□□□□□ -1.21
LDB3-206ENST00000477489 ANO3Q9BYT9 981 aa7.5□□□□□ -1.21
LDB3-206ENST00000477489 TMEM39BQ9GZU3 492 aa7.5□□□□□ -1.21
LDB3-206ENST00000477489 NT5C3AQ9H0P0 336 aa7.5□□□□□ -1.21
LDB3-206ENST00000477489 BIN2Q9UBW5 565 aaPredicted RBP7.5□□□□□ -1.21
LDB3-206ENST00000477489 CNOT7Q9UIV1 285 aaKnown RBP7.5□□□□□ -1.21
LDB3-206ENST00000477489 ZNF112Q9UJU3 913 aa7.5□□□□□ -1.21
LDB3-206ENST00000477489 PVALEFA0A1B0GWK0 134 aa7.49□□□□□ -1.21
LDB3-206ENST00000477489 A0A1W2PRG0 241 aa7.49□□□□□ -1.21
LDB3-206ENST00000477489 CCDC85CA6NKD9 419 aa7.49□□□□□ -1.21
LDB3-206ENST00000477489 FAM196BA6NMK8 535 aa7.49□□□□□ -1.21
LDB3-206ENST00000477489 C19orf81C9J6K1 198 aa7.49□□□□□ -1.21
LDB3-206ENST00000477489 MEIS2O14770 477 aa7.49□□□□□ -1.21
LDB3-206ENST00000477489 GFRA3O60609 400 aa7.49□□□□□ -1.21
LDB3-206ENST00000477489 RHOBTB3O94955 611 aa7.49□□□□□ -1.21
LDB3-206ENST00000477489 ADH1BP00325 375 aa7.49□□□□□ -1.21
LDB3-206ENST00000477489 ZNF18P17022 549 aa7.49□□□□□ -1.21
LDB3-206ENST00000477489 SLC16A2P36021 539 aa7.49□□□□□ -1.21
LDB3-206ENST00000477489 KCNJ6P48051 423 aa7.49□□□□□ -1.21
LDB3-206ENST00000477489 IKQ13123 557 aaPredicted RBP7.49□□□□□ -1.21
LDB3-206ENST00000477489 STIM1Q13586 685 aa7.49□□□□□ -1.21
LDB3-206ENST00000477489 RRP1BQ14684 758 aaKnown RBP7.49□□□□□ -1.21
LDB3-206ENST00000477489 NBPF9Q3BBW0 867 aa7.49□□□□□ -1.21
LDB3-206ENST00000477489 SUPT20HL1Q3ZLR7 823 aa7.49□□□□□ -1.21
LDB3-206ENST00000477489 SPECC1Q5M775 1068 aa7.49□□□□□ -1.21
LDB3-206ENST00000477489 NOL9Q5SY16 702 aaKnown RBP7.49□□□□□ -1.21
LDB3-206ENST00000477489 SPATA1Q5VX52 437 aa7.49□□□□□ -1.21
LDB3-206ENST00000477489 HAUS3Q68CZ6 603 aa7.49□□□□□ -1.21
LDB3-206ENST00000477489 USP49Q70CQ1 688 aa7.49□□□□□ -1.21
LDB3-206ENST00000477489 RASGRP2Q7LDG7 609 aa7.49□□□□□ -1.21
LDB3-206ENST00000477489 MCF2L2Q86YR7 1114 aa7.49□□□□□ -1.21
LDB3-206ENST00000477489 CLEC10AQ8IUN9 316 aa7.49□□□□□ -1.21
LDB3-206ENST00000477489 PDILTQ8N807 584 aa7.49□□□□□ -1.21
LDB3-206ENST00000477489 RDH13Q8NBN7 331 aa7.49□□□□□ -1.21
LDB3-206ENST00000477489 CCDC150Q8NCX0 1101 aa7.49□□□□□ -1.21
LDB3-206ENST00000477489 RASSF8Q8NHQ8 419 aa7.49□□□□□ -1.21
LDB3-206ENST00000477489 ERMNQ8TAM6 284 aa7.49□□□□□ -1.21
LDB3-206ENST00000477489 NOC3LQ8WTT2 800 aaKnown RBP7.49□□□□□ -1.21
LDB3-206ENST00000477489 C12orf42Q96LP6 360 aa7.49□□□□□ -1.21
LDB3-206ENST00000477489 C7orf25Q9BPX7 421 aa7.49□□□□□ -1.21
LDB3-206ENST00000477489 TMEM60Q9H2L4 133 aa7.49□□□□□ -1.21
LDB3-206ENST00000477489 CPVLQ9H3G5 476 aa7.49□□□□□ -1.21
LDB3-206ENST00000477489 KCNMB3Q9NPA1 279 aa7.49□□□□□ -1.21
LDB3-206ENST00000477489 LRWD1Q9UFC0 647 aa7.49□□□□□ -1.21
LDB3-206ENST00000477489 DDX25Q9UHL0 483 aaKnown RBP7.49□□□□□ -1.21
LDB3-206ENST00000477489 RWDD2AQ9UIY3 292 aa7.49□□□□□ -1.21
LDB3-206ENST00000477489 MYPNQ86TC9 1320 aa7.49□□□□□ -1.21
LDB3-206ENST00000477489 PARP14Q460N5 1801 aa7.48□□□□□ -1.21
LDB3-206ENST00000477489 A0A087X0B3 334 aa7.48□□□□□ -1.21
LDB3-206ENST00000477489 GCOM1H8Y6P7 765 aaPredicted RBP7.48□□□□□ -1.21
LDB3-206ENST00000477489 BIN1O00499 593 aa7.48□□□□□ -1.21
LDB3-206ENST00000477489 AP5Z1O43299 807 aa7.48□□□□□ -1.21
LDB3-206ENST00000477489 ICAM1P05362 532 aa7.48□□□□□ -1.21
LDB3-206ENST00000477489 POLR2MP0CAP2 368 aa7.48□□□□□ -1.21
LDB3-206ENST00000477489 LBX1P52954 281 aa7.48□□□□□ -1.21
LDB3-206ENST00000477489 OAZ1P54368 228 aa7.48□□□□□ -1.21
LDB3-206ENST00000477489 SETQ01105 290 aaPredicted RBP7.48□□□□□ -1.21
LDB3-206ENST00000477489 PSMD2Q13200 908 aa7.48□□□□□ -1.21
LDB3-206ENST00000477489 PUS10Q3MIT2 529 aaKnown RBP7.48□□□□□ -1.21
LDB3-206ENST00000477489 NAALADL2Q58DX5 795 aa7.48□□□□□ -1.21
LDB3-206ENST00000477489 NIPA1Q7RTP0 329 aa7.48□□□□□ -1.21
LDB3-206ENST00000477489 DRC7Q8IY82 874 aa7.48□□□□□ -1.21
LDB3-206ENST00000477489 SCYL3Q8IZE3 742 aa7.48□□□□□ -1.21
LDB3-206ENST00000477489 PRPF38AQ8NAV1 312 aaKnown RBP7.48□□□□□ -1.21
LDB3-206ENST00000477489 CCDC112Q8NEF3 446 aa7.48□□□□□ -1.21
LDB3-206ENST00000477489 ANKRD20A12PQ8NF67 263 aa7.48□□□□□ -1.21
LDB3-206ENST00000477489 DHTKD1Q96HY7 919 aaPredicted RBP7.48□□□□□ -1.21
LDB3-206ENST00000477489 CDK5RAP3Q96JB5 506 aa7.48□□□□□ -1.21
LDB3-206ENST00000477489 SLF1Q9BQI6 1058 aa7.48□□□□□ -1.21
LDB3-206ENST00000477489 GPRC5DQ9NZD1 345 aa7.48□□□□□ -1.21
LDB3-206ENST00000477489 HACL1Q9UJ83 578 aa7.48□□□□□ -1.21
LDB3-206ENST00000477489 PCDHA12Q9UN75 941 aa7.48□□□□□ -1.21
LDB3-206ENST00000477489 BICDL2A1A5D9 508 aa7.47□□□□□ -1.21
LDB3-206ENST00000477489 PSMA7O14818 248 aa7.47□□□□□ -1.21
LDB3-206ENST00000477489 ADAMTS3O15072 1205 aa7.47□□□□□ -1.21
LDB3-206ENST00000477489 MARCH6O60337 910 aa7.47□□□□□ -1.21
LDB3-206ENST00000477489 KIF20AO95235 890 aa7.47□□□□□ -1.21
LDB3-206ENST00000477489 S1PR4O95977 384 aa7.47□□□□□ -1.21
LDB3-206ENST00000477489 TUBB4AP04350 444 aa7.47□□□□□ -1.21
LDB3-206ENST00000477489 RPN1P04843 607 aaKnown RBP7.47□□□□□ -1.21
LDB3-206ENST00000477489 BMP6P22004 513 aa7.47□□□□□ -1.21
LDB3-206ENST00000477489 TECP42680 631 aa7.47□□□□□ -1.21
LDB3-206ENST00000477489 ECE1P42892 770 aa7.47□□□□□ -1.21
LDB3-206ENST00000477489 AFMP43652 599 aa7.47□□□□□ -1.21
LDB3-206ENST00000477489 TERF1P54274 439 aa7.47□□□□□ -1.21
LDB3-206ENST00000477489 JAG1P78504 1218 aa7.47□□□□□ -1.21
LDB3-206ENST00000477489 ARHGAP4P98171 946 aa7.47□□□□□ -1.21
LDB3-206ENST00000477489 FANCCQ00597 558 aa7.47□□□□□ -1.21
LDB3-206ENST00000477489 PAK1Q13153 545 aa7.47□□□□□ -1.21
LDB3-206ENST00000477489 CUL4BQ13620 913 aa7.47□□□□□ -1.21
LDB3-206ENST00000477489 KARSQ15046 597 aaKnown RBP7.47□□□□□ -1.21
LDB3-206ENST00000477489 TKFCQ3LXA3 575 aa7.47□□□□□ -1.21
LDB3-206ENST00000477489 FILIP1LQ4L180 1135 aa7.47□□□□□ -1.21
LDB3-206ENST00000477489 TMEM119Q4V9L6 283 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms