RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 GPR20Q99678 358 aa6.57□□□□□ -1.36
UBR3-209ENST00000477461 JAM3Q9BX67 310 aa6.57□□□□□ -1.36
UBR3-209ENST00000477461 INVSQ9Y283 1065 aa6.57□□□□□ -1.36
UBR3-209ENST00000477461 R3HCC1Q9Y3T6 440 aaKnown RBP6.57□□□□□ -1.36
UBR3-209ENST00000477461 ITGB3P05106 788 aa6.56□□□□□ -1.36
UBR3-209ENST00000477461 TCF3P15923 654 aa6.56□□□□□ -1.36
UBR3-209ENST00000477461 PPP2R2AP63151 447 aa6.56□□□□□ -1.36
UBR3-209ENST00000477461 ARID5AQ03989 594 aa6.56□□□□□ -1.36
UBR3-209ENST00000477461 PUM1Q14671 1186 aaKnown RBP eCLIP6.56□□□□□ -1.36
UBR3-209ENST00000477461 ZXDCQ2QGD7 858 aaPredicted RBP6.56□□□□□ -1.36
UBR3-209ENST00000477461 PRAMEF18Q5VWM3 479 aa6.56□□□□□ -1.36
UBR3-209ENST00000477461 EEPD1Q7L9B9 569 aa6.56□□□□□ -1.36
UBR3-209ENST00000477461 CELF2-AS1Q8N7Q2 184 aa6.56□□□□□ -1.36
UBR3-209ENST00000477461 PCDH18Q9HCL0 1135 aa6.56□□□□□ -1.36
UBR3-209ENST00000477461 CROTQ9UKG9 612 aa6.56□□□□□ -1.36
UBR3-209ENST00000477461 PCDHB4Q9Y5E5 795 aa6.56□□□□□ -1.36
UBR3-209ENST00000477461 ZNF536O15090 1300 aa6.55□□□□□ -1.36
UBR3-209ENST00000477461 TCRBV5S2A0A599 114 aa6.55□□□□□ -1.36
UBR3-209ENST00000477461 MROH6A6NGR9 719 aa6.55□□□□□ -1.36
UBR3-209ENST00000477461 MSCO60682 206 aa6.55□□□□□ -1.36
UBR3-209ENST00000477461 DGKIO75912 1065 aa6.55□□□□□ -1.36
UBR3-209ENST00000477461 FGRP09769 529 aa6.55□□□□□ -1.36
UBR3-209ENST00000477461 KIAA2012Q0VF49 1180 aa6.55□□□□□ -1.36
UBR3-209ENST00000477461 ADAM9Q13443 819 aa6.55□□□□□ -1.36
UBR3-209ENST00000477461 ZNF827Q17R98 1081 aa6.55□□□□□ -1.36
UBR3-209ENST00000477461 SLC10A6Q3KNW5 377 aa6.55□□□□□ -1.36
UBR3-209ENST00000477461 TBC1D10BQ4KMP7 808 aaPredicted RBP6.55□□□□□ -1.36
UBR3-209ENST00000477461 ACBD5Q5T8D3 534 aaPredicted RBP6.55□□□□□ -1.36
UBR3-209ENST00000477461 USP53Q70EK8 1073 aa6.55□□□□□ -1.36
UBR3-209ENST00000477461 MCF2L2Q86YR7 1114 aa6.55□□□□□ -1.36
UBR3-209ENST00000477461 RBM12BQ8IXT5 1001 aaKnown RBP6.55□□□□□ -1.36
UBR3-209ENST00000477461 Q8N1Y9 231 aa6.55□□□□□ -1.36
UBR3-209ENST00000477461 TOE1Q96GM8 510 aaKnown RBP6.55□□□□□ -1.36
UBR3-209ENST00000477461 C1orf159Q96HA4 380 aa6.55□□□□□ -1.36
UBR3-209ENST00000477461 IER2Q9BTL4 223 aa6.55□□□□□ -1.36
UBR3-209ENST00000477461 RBPJLQ9UBG7 517 aa6.55□□□□□ -1.36
UBR3-209ENST00000477461 A0A1W2PQU0 124 aa6.54□□□□□ -1.36
UBR3-209ENST00000477461 H7BY64 318 aa6.54□□□□□ -1.36
UBR3-209ENST00000477461 AGRPO00253 132 aa6.54□□□□□ -1.36
UBR3-209ENST00000477461 CYP1A1P04798 512 aaPredicted RBP6.54□□□□□ -1.36
UBR3-209ENST00000477461 IL13P35225 146 aa6.54□□□□□ -1.36
UBR3-209ENST00000477461 PRR31Q5SQ13 230 aa6.54□□□□□ -1.36
UBR3-209ENST00000477461 SLC35F1Q5T1Q4 408 aa6.54□□□□□ -1.36
UBR3-209ENST00000477461 PHF19Q5T6S3 580 aa6.54□□□□□ -1.36
UBR3-209ENST00000477461 TMC5Q6UXY8 1006 aa6.54□□□□□ -1.36
UBR3-209ENST00000477461 ANKS3Q6ZW76 656 aa6.54□□□□□ -1.36
UBR3-209ENST00000477461 LIMS2Q7Z4I7 341 aa6.54□□□□□ -1.36
UBR3-209ENST00000477461 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.54□□□□□ -1.36
UBR3-209ENST00000477461 LOXL4Q96JB6 756 aa6.54□□□□□ -1.36
UBR3-209ENST00000477461 RBM15Q96T37 977 aaKnown RBP eCLIP6.54□□□□□ -1.36
UBR3-209ENST00000477461 SMPD4Q9NXE4 827 aa6.54□□□□□ -1.36
UBR3-209ENST00000477461 PPARGC1AQ9UBK2 798 aaKnown RBP6.54□□□□□ -1.36
UBR3-209ENST00000477461 TADA3O75528 432 aa6.53□□□□□ -1.36
UBR3-209ENST00000477461 LRG1P02750 347 aa6.53□□□□□ -1.36
UBR3-209ENST00000477461 MAGEA10P43363 369 aaPredicted RBP6.53□□□□□ -1.36
UBR3-209ENST00000477461 MLLT6P55198 1093 aaPredicted RBP6.53□□□□□ -1.36
UBR3-209ENST00000477461 RBM10P98175 930 aaKnown RBP6.53□□□□□ -1.36
UBR3-209ENST00000477461 GRIN1Q05586 938 aa6.53□□□□□ -1.36
UBR3-209ENST00000477461 CHRNA2Q15822 529 aa6.53□□□□□ -1.36
UBR3-209ENST00000477461 TEPPQ6URK8 271 aa6.53□□□□□ -1.36
UBR3-209ENST00000477461 FAM124AQ86V42 546 aa6.53□□□□□ -1.36
UBR3-209ENST00000477461 LGI4Q8N135 537 aa6.53□□□□□ -1.36
UBR3-209ENST00000477461 KCTD13Q8WZ19 329 aa6.53□□□□□ -1.36
UBR3-209ENST00000477461 TINF2Q9BSI4 451 aa6.53□□□□□ -1.36
UBR3-209ENST00000477461 DTLQ9NZJ0 730 aa6.53□□□□□ -1.36
UBR3-209ENST00000477461 WASF3Q9UPY6 502 aa6.53□□□□□ -1.36
UBR3-209ENST00000477461 ZNF652Q9Y2D9 606 aa6.53□□□□□ -1.36
UBR3-209ENST00000477461 ZCCHC6Q5VYS8 1495 aaKnown RBP6.53□□□□□ -1.36
UBR3-209ENST00000477461 SLC27A2O14975 620 aa6.52□□□□□ -1.37
UBR3-209ENST00000477461 DLX3O60479 287 aa6.52□□□□□ -1.37
UBR3-209ENST00000477461 COL6A2P12110 1019 aa6.52□□□□□ -1.37
UBR3-209ENST00000477461 FAM26FQ5R3K3 315 aa6.52□□□□□ -1.37
UBR3-209ENST00000477461 PIP4K2CQ8TBX8 421 aa6.52□□□□□ -1.37
UBR3-209ENST00000477461 LCORQ96JN0 433 aaPredicted RBP6.52□□□□□ -1.37
UBR3-209ENST00000477461 EPB41L1Q9H4G0 881 aa6.52□□□□□ -1.37
UBR3-209ENST00000477461 L2HGDHQ9H9P8 463 aa6.52□□□□□ -1.37
UBR3-209ENST00000477461 NGRNQ9NPE2 291 aaKnown RBP6.52□□□□□ -1.37
UBR3-209ENST00000477461 MYOTQ9UBF9 498 aa6.52□□□□□ -1.37
UBR3-209ENST00000477461 PRODHO43272 600 aa6.51□□□□□ -1.37
UBR3-209ENST00000477461 PLATP00750 562 aa6.51□□□□□ -1.37
UBR3-209ENST00000477461 CAPNS1P04632 268 aa6.51□□□□□ -1.37
UBR3-209ENST00000477461 TESK1Q15569 626 aa6.51□□□□□ -1.37
UBR3-209ENST00000477461 BORAQ6PGQ7 559 aa6.51□□□□□ -1.37
UBR3-209ENST00000477461 KCNT2Q6UVM3 1135 aa6.51□□□□□ -1.37
UBR3-209ENST00000477461 C8orf49Q96NF6 230 aa6.51□□□□□ -1.37
UBR3-209ENST00000477461 CLIC6Q96NY7 704 aa6.51□□□□□ -1.37
UBR3-209ENST00000477461 KCNJ15Q99712 375 aa6.51□□□□□ -1.37
UBR3-209ENST00000477461 PHF20Q9BVI0 1012 aa6.51□□□□□ -1.37
UBR3-209ENST00000477461 CDIP1Q9H305 208 aa6.51□□□□□ -1.37
UBR3-209ENST00000477461 NPFFR2Q9Y5X5 522 aa6.51□□□□□ -1.37
UBR3-209ENST00000477461 BLACEA4D250 179 aa6.5□□□□□ -1.37
UBR3-209ENST00000477461 ADAM17P78536 824 aa6.5□□□□□ -1.37
UBR3-209ENST00000477461 CLEC4DQ8WXI8 215 aa6.5□□□□□ -1.37
UBR3-209ENST00000477461 SMOC1Q9H4F8 434 aa6.5□□□□□ -1.37
UBR3-209ENST00000477461 ST6GALNAC2Q9UJ37 374 aa6.5□□□□□ -1.37
UBR3-209ENST00000477461 ZDHHC9Q9Y397 364 aa6.5□□□□□ -1.37
UBR3-209ENST00000477461 B4GALT3O60512 393 aa6.49□□□□□ -1.37
UBR3-209ENST00000477461 LTFP02788 710 aa6.49□□□□□ -1.37
UBR3-209ENST00000477461 ZNF28P17035 718 aa6.49□□□□□ -1.37
UBR3-209ENST00000477461 MAP4K2Q12851 820 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms