RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 RASSF8Q8NHQ8 419 aa16.26■□□□□ 0.19
COL4A6-206ENST00000477085 PAGR1Q9BTK6 254 aa16.26■□□□□ 0.19
COL4A6-206ENST00000477085 RBBP6Q7Z6E9 1792 aaKnown RBP16.25■□□□□ 0.19
COL4A6-206ENST00000477085 ASTN1O14525 1302 aa16.25■□□□□ 0.19
COL4A6-206ENST00000477085 GTPBP6O43824 516 aaPredicted RBP16.25■□□□□ 0.19
COL4A6-206ENST00000477085 MED24O75448 989 aa16.25■□□□□ 0.19
COL4A6-206ENST00000477085 CYP2C8P10632 490 aa16.25■□□□□ 0.19
COL4A6-206ENST00000477085 CHST13Q8NET6 341 aa16.25■□□□□ 0.19
COL4A6-206ENST00000477085 BRI3BPQ8WY22 251 aa16.25■□□□□ 0.19
COL4A6-206ENST00000477085 MOV10L1Q9BXT6 1211 aaKnown RBP16.25■□□□□ 0.19
COL4A6-206ENST00000477085 DCAF8L1A6NGE4 600 aa16.24■□□□□ 0.19
COL4A6-206ENST00000477085 CAVIN2O95810 425 aa16.24■□□□□ 0.19
COL4A6-206ENST00000477085 SPATA31C1P0DKV0 1188 aa16.24■□□□□ 0.19
COL4A6-206ENST00000477085 ARHGEF16Q5VV41 709 aa16.24■□□□□ 0.19
COL4A6-206ENST00000477085 SPRYD7Q5W111 196 aa16.24■□□□□ 0.19
COL4A6-206ENST00000477085 NCAPH2Q6IBW4 605 aa16.24■□□□□ 0.19
COL4A6-206ENST00000477085 B3GNT9Q6UX72 402 aa16.24■□□□□ 0.19
COL4A6-206ENST00000477085 VSIG10LQ86VR7 867 aa16.24■□□□□ 0.19
COL4A6-206ENST00000477085 CALML4Q96GE6 196 aa16.24■□□□□ 0.19
COL4A6-206ENST00000477085 JADE2Q9NQC1 790 aa16.24■□□□□ 0.19
COL4A6-206ENST00000477085 KCNH7Q9NS40 1196 aa16.24■□□□□ 0.19
COL4A6-206ENST00000477085 RABGAP1Q9Y3P9 1069 aa16.24■□□□□ 0.19
COL4A6-206ENST00000477085 BTBD19C9JJ37 291 aa16.23■□□□□ 0.19
COL4A6-206ENST00000477085 DHX15O43143 795 aaKnown RBP16.23■□□□□ 0.19
COL4A6-206ENST00000477085 KLRC4O43908 158 aa16.23■□□□□ 0.19
COL4A6-206ENST00000477085 BCRP11274 1271 aa16.23■□□□□ 0.19
COL4A6-206ENST00000477085 MYCLP12524 364 aaPredicted RBP16.23■□□□□ 0.19
COL4A6-206ENST00000477085 OSBPP22059 807 aa16.23■□□□□ 0.19
COL4A6-206ENST00000477085 CCT6AP40227 531 aaKnown RBP16.23■□□□□ 0.19
COL4A6-206ENST00000477085 CNTN2Q02246 1040 aa16.23■□□□□ 0.19
COL4A6-206ENST00000477085 FSTL1Q12841 308 aa16.23■□□□□ 0.19
COL4A6-206ENST00000477085 NIPA1Q7RTP0 329 aa16.23■□□□□ 0.19
COL4A6-206ENST00000477085 CATSPER3Q86XQ3 398 aa16.23■□□□□ 0.19
COL4A6-206ENST00000477085 GSDMAQ96QA5 445 aa16.23■□□□□ 0.19
COL4A6-206ENST00000477085 PTPN18Q99952 460 aa16.23■□□□□ 0.19
COL4A6-206ENST00000477085 ZNF577Q9BSK1 485 aa16.23■□□□□ 0.19
COL4A6-206ENST00000477085 CUEDC2Q9H467 287 aa16.23■□□□□ 0.19
COL4A6-206ENST00000477085 CCL15-CCL14A0A0B4J2E2 113 aa16.23■□□□□ 0.19
COL4A6-206ENST00000477085 POTEB3A0JP26 581 aa16.23■□□□□ 0.19
COL4A6-206ENST00000477085 IPO5O00410 1097 aaKnown RBP16.23■□□□□ 0.19
COL4A6-206ENST00000477085 SMC2O95347 1197 aa16.23■□□□□ 0.19
COL4A6-206ENST00000477085 NR3C2P08235 984 aa16.23■□□□□ 0.19
COL4A6-206ENST00000477085 CETPP11597 493 aa16.23■□□□□ 0.19
COL4A6-206ENST00000477085 ERCC3P19447 782 aa16.23■□□□□ 0.19
COL4A6-206ENST00000477085 GTF2A2P52657 109 aa16.23■□□□□ 0.19
COL4A6-206ENST00000477085 ITGB3BPQ13352 177 aaPredicted RBP16.23■□□□□ 0.19
COL4A6-206ENST00000477085 MCM6Q14566 821 aa16.23■□□□□ 0.19
COL4A6-206ENST00000477085 NCAPHQ15003 741 aa16.23■□□□□ 0.19
COL4A6-206ENST00000477085 CCL15Q16663 113 aa16.23■□□□□ 0.19
COL4A6-206ENST00000477085 LRCH2Q5VUJ6 765 aa16.23■□□□□ 0.19
COL4A6-206ENST00000477085 POTEBQ6S5H4 581 aa16.23■□□□□ 0.19
COL4A6-206ENST00000477085 MED15Q96RN5 788 aa16.23■□□□□ 0.19
COL4A6-206ENST00000477085 BPIFA3Q9BQP9 254 aa16.23■□□□□ 0.19
COL4A6-206ENST00000477085 AGO4Q9HCK5 861 aaKnown RBP16.23■□□□□ 0.19
COL4A6-206ENST00000477085 PDHXO00330 501 aa16.22■□□□□ 0.19
COL4A6-206ENST00000477085 RGS20O76081 388 aa16.22■□□□□ 0.19
COL4A6-206ENST00000477085 RPN1P04843 607 aaKnown RBP16.22■□□□□ 0.19
COL4A6-206ENST00000477085 CD44P16070 742 aaKnown RBP16.22■□□□□ 0.19
COL4A6-206ENST00000477085 SETQ01105 290 aaPredicted RBP16.22■□□□□ 0.19
COL4A6-206ENST00000477085 PABPC4Q13310 644 aaKnown RBP eCLIP16.22■□□□□ 0.19
COL4A6-206ENST00000477085 PPP2R5CQ13362 524 aa16.22■□□□□ 0.19
COL4A6-206ENST00000477085 NCAPG2Q86XI2 1143 aa16.22■□□□□ 0.19
COL4A6-206ENST00000477085 FAM43AQ8N2R8 423 aa16.22■□□□□ 0.19
COL4A6-206ENST00000477085 AOPEPQ8N6M6 819 aa16.22■□□□□ 0.19
COL4A6-206ENST00000477085 TRIML1Q8N9V2 468 aa16.22■□□□□ 0.19
COL4A6-206ENST00000477085 RAD54LQ92698 747 aa16.22■□□□□ 0.19
COL4A6-206ENST00000477085 CCDC34Q96HJ3 373 aa16.22■□□□□ 0.19
COL4A6-206ENST00000477085 C7orf25Q9BPX7 421 aa16.22■□□□□ 0.19
COL4A6-206ENST00000477085 TRIM9Q9C026 710 aa16.22■□□□□ 0.19
COL4A6-206ENST00000477085 MAF1Q9H063 256 aa16.22■□□□□ 0.19
COL4A6-206ENST00000477085 UNC45AQ9H3U1 944 aa16.22■□□□□ 0.19
COL4A6-206ENST00000477085 KIAA1024Q9UPX6 916 aa16.22■□□□□ 0.19
COL4A6-206ENST00000477085 LCTP09848 1927 aa16.21■□□□□ 0.19
COL4A6-206ENST00000477085 MYMKA6NI61 221 aa16.21■□□□□ 0.19
COL4A6-206ENST00000477085 E9PMD0 336 aa16.21■□□□□ 0.19
COL4A6-206ENST00000477085 ATP9AO75110 1047 aa16.21■□□□□ 0.19
COL4A6-206ENST00000477085 PSMC6P62333 389 aa16.21■□□□□ 0.19
COL4A6-206ENST00000477085 SEMA3FQ13275 785 aa16.21■□□□□ 0.19
COL4A6-206ENST00000477085 DHX8Q14562 1220 aaKnown RBP16.21■□□□□ 0.19
COL4A6-206ENST00000477085 SMYD4Q8IYR2 804 aaPredicted RBP16.21■□□□□ 0.19
COL4A6-206ENST00000477085 NSUN6Q8TEA1 469 aaKnown RBP16.21■□□□□ 0.19
COL4A6-206ENST00000477085 HSD17B14Q9BPX1 270 aa16.21■□□□□ 0.19
COL4A6-206ENST00000477085 HSD3B7Q9H2F3 369 aa16.21■□□□□ 0.19
COL4A6-206ENST00000477085 MAGEF1Q9HAY2 307 aa16.21■□□□□ 0.19
COL4A6-206ENST00000477085 RGL1Q9NZL6 768 aa16.21■□□□□ 0.19
COL4A6-206ENST00000477085 PKD2L1Q9P0L9 805 aa16.21■□□□□ 0.19
COL4A6-206ENST00000477085 STK17AQ9UEE5 414 aa16.21■□□□□ 0.19
COL4A6-206ENST00000477085 POTEFA5A3E0 1075 aa16.21■□□□□ 0.18
COL4A6-206ENST00000477085 SOWAHBA6NEL2 793 aa16.21■□□□□ 0.18
COL4A6-206ENST00000477085 GAS7O60861 476 aa16.21■□□□□ 0.18
COL4A6-206ENST00000477085 RPA1P27694 616 aa16.21■□□□□ 0.18
COL4A6-206ENST00000477085 HUNKP57058 714 aa16.21■□□□□ 0.18
COL4A6-206ENST00000477085 MTMR1Q13613 665 aa16.21■□□□□ 0.18
COL4A6-206ENST00000477085 POTEGQ6S5H5 508 aa16.21■□□□□ 0.18
COL4A6-206ENST00000477085 ANKRD35Q8N283 1001 aa16.21■□□□□ 0.18
COL4A6-206ENST00000477085 LARP4BQ92615 738 aaKnown RBP16.21■□□□□ 0.18
COL4A6-206ENST00000477085 CDK5RAP3Q96JB5 506 aa16.21■□□□□ 0.18
COL4A6-206ENST00000477085 EIF2AK1Q9BQI3 630 aaKnown RBP16.21■□□□□ 0.18
COL4A6-206ENST00000477085 NAT10Q9H0A0 1025 aaKnown RBP16.21■□□□□ 0.18
COL4A6-206ENST00000477085 PASKQ96RG2 1323 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms