RNA–Protein interactions for RNA: ENST00000476964.5

SOX2-OT-207, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 606 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-207ENST00000476964 C2orf27AQ580R0 203 aa6.76□□□□□ -1.33
SOX2-OT-207ENST00000476964 HABP4Q5JVS0 413 aaKnown RBP6.76□□□□□ -1.33
SOX2-OT-207ENST00000476964 CNKSR3Q6P9H4 555 aa6.76□□□□□ -1.33
SOX2-OT-207ENST00000476964 LCNL1Q6ZST4 164 aa6.76□□□□□ -1.33
SOX2-OT-207ENST00000476964 MILR1Q7Z6M3 343 aa6.76□□□□□ -1.33
SOX2-OT-207ENST00000476964 IPO9Q96P70 1041 aaKnown RBP6.76□□□□□ -1.33
SOX2-OT-207ENST00000476964 JAM3Q9BX67 310 aa6.76□□□□□ -1.33
SOX2-OT-207ENST00000476964 IRF2BPLQ9H1B7 796 aa6.76□□□□□ -1.33
SOX2-OT-207ENST00000476964 SLC6A20Q9NP91 592 aa6.76□□□□□ -1.33
SOX2-OT-207ENST00000476964 TRAF6Q9Y4K3 522 aa6.76□□□□□ -1.33
SOX2-OT-207ENST00000476964 RFXAPO00287 272 aa6.75□□□□□ -1.33
SOX2-OT-207ENST00000476964 AQP7O14520 342 aa6.75□□□□□ -1.33
SOX2-OT-207ENST00000476964 KCNQ2O43526 872 aa6.75□□□□□ -1.33
SOX2-OT-207ENST00000476964 MC3RP41968 323 aa6.75□□□□□ -1.33
SOX2-OT-207ENST00000476964 TRIM61Q5EBN2 209 aa6.75□□□□□ -1.33
SOX2-OT-207ENST00000476964 STEAP3Q658P3 488 aa6.75□□□□□ -1.33
SOX2-OT-207ENST00000476964 CYP4F22Q6NT55 531 aa6.75□□□□□ -1.33
SOX2-OT-207ENST00000476964 ZSWIM4Q9H7M6 989 aa6.75□□□□□ -1.33
SOX2-OT-207ENST00000476964 TCRBV5S2A0A599 114 aa6.74□□□□□ -1.33
SOX2-OT-207ENST00000476964 GRK2P25098 689 aa6.74□□□□□ -1.33
SOX2-OT-207ENST00000476964 GRK3P35626 688 aa6.74□□□□□ -1.33
SOX2-OT-207ENST00000476964 BMS1Q14692 1282 aaKnown RBP6.74□□□□□ -1.33
SOX2-OT-207ENST00000476964 SPOCD1Q6ZMY3 1216 aa6.74□□□□□ -1.33
SOX2-OT-207ENST00000476964 OTOP3Q7RTS5 596 aa6.74□□□□□ -1.33
SOX2-OT-207ENST00000476964 TMEM151BQ8IW70 566 aa6.74□□□□□ -1.33
SOX2-OT-207ENST00000476964 GSTCDQ8NEC7 633 aa6.74□□□□□ -1.33
SOX2-OT-207ENST00000476964 ZSWIM2Q8NEG5 633 aa6.74□□□□□ -1.33
SOX2-OT-207ENST00000476964 SMOC1Q9H4F8 434 aa6.74□□□□□ -1.33
SOX2-OT-207ENST00000476964 HSPBP1Q9NZL4 362 aa6.74□□□□□ -1.33
SOX2-OT-207ENST00000476964 PLA2G1BP04054 148 aaKnown RBP6.73□□□□□ -1.33
SOX2-OT-207ENST00000476964 SOD2P04179 222 aa6.73□□□□□ -1.33
SOX2-OT-207ENST00000476964 ZSCAN22P10073 491 aaPredicted RBP6.73□□□□□ -1.33
SOX2-OT-207ENST00000476964 LIMS1P48059 325 aa6.73□□□□□ -1.33
SOX2-OT-207ENST00000476964 ETV3LQ6ZN32 361 aa6.73□□□□□ -1.33
SOX2-OT-207ENST00000476964 FAM126BQ8IXS8 530 aa6.73□□□□□ -1.33
SOX2-OT-207ENST00000476964 NLGN1Q8N2Q7 840 aa6.73□□□□□ -1.33
SOX2-OT-207ENST00000476964 LINC00482Q8N8I6 264 aa6.73□□□□□ -1.33
SOX2-OT-207ENST00000476964 PHOSPHO1Q8TCT1 267 aa6.73□□□□□ -1.33
SOX2-OT-207ENST00000476964 FNIP1Q8TF40 1166 aa6.73□□□□□ -1.33
SOX2-OT-207ENST00000476964 PWWP2AQ96N64 755 aa6.73□□□□□ -1.33
SOX2-OT-207ENST00000476964 KRTAP9-9Q9BYP9 154 aa6.73□□□□□ -1.33
SOX2-OT-207ENST00000476964 KRTAP9-4Q9BYQ2 154 aa6.73□□□□□ -1.33
SOX2-OT-207ENST00000476964 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.72□□□□□ -1.33
SOX2-OT-207ENST00000476964 FAM47E-STBD1D6RA91 191 aa6.72□□□□□ -1.33
SOX2-OT-207ENST00000476964 ARVCFO00192 962 aa6.72□□□□□ -1.33
SOX2-OT-207ENST00000476964 C8BP07358 591 aa6.72□□□□□ -1.33
SOX2-OT-207ENST00000476964 AFF3P51826 1226 aaKnown RBP6.72□□□□□ -1.33
SOX2-OT-207ENST00000476964 DLX2Q07687 328 aaPredicted RBP6.72□□□□□ -1.33
SOX2-OT-207ENST00000476964 CR1LQ2VPA4 569 aa6.72□□□□□ -1.33
SOX2-OT-207ENST00000476964 VWA3BQ502W6 1294 aa6.72□□□□□ -1.33
SOX2-OT-207ENST00000476964 TCERG1LQ5VWI1 586 aa6.72□□□□□ -1.33
SOX2-OT-207ENST00000476964 ARRDC4Q8NCT1 418 aa6.72□□□□□ -1.33
SOX2-OT-207ENST00000476964 PCDH19Q8TAB3 1148 aa6.72□□□□□ -1.33
SOX2-OT-207ENST00000476964 SMARCC2Q8TAQ2 1214 aa6.72□□□□□ -1.33
SOX2-OT-207ENST00000476964 PIP4K2CQ8TBX8 421 aa6.72□□□□□ -1.33
SOX2-OT-207ENST00000476964 MRFAP1L1Q96HT8 127 aa6.72□□□□□ -1.33
SOX2-OT-207ENST00000476964 ALG1Q9BT22 464 aa6.72□□□□□ -1.33
SOX2-OT-207ENST00000476964 PIF1Q9H611 641 aa6.72□□□□□ -1.33
SOX2-OT-207ENST00000476964 IPPKQ9H8X2 491 aa6.72□□□□□ -1.33
SOX2-OT-207ENST00000476964 PCDHA8Q9Y5H6 950 aa6.72□□□□□ -1.33
SOX2-OT-207ENST00000476964 PTCH2Q9Y6C5 1203 aa6.72□□□□□ -1.33
SOX2-OT-207ENST00000476964 KRIT1O00522 736 aa6.71□□□□□ -1.34
SOX2-OT-207ENST00000476964 FFAR3O14843 346 aa6.71□□□□□ -1.34
SOX2-OT-207ENST00000476964 MAFKO60675 156 aa6.71□□□□□ -1.34
SOX2-OT-207ENST00000476964 EFCAB14O75071 495 aa6.71□□□□□ -1.34
SOX2-OT-207ENST00000476964 NAT1P18440 290 aa6.71□□□□□ -1.34
SOX2-OT-207ENST00000476964 PAK1Q13153 545 aa6.71□□□□□ -1.34
SOX2-OT-207ENST00000476964 SQSTM1Q13501 440 aa6.71□□□□□ -1.34
SOX2-OT-207ENST00000476964 SAPCD2Q86UD0 394 aa6.71□□□□□ -1.34
SOX2-OT-207ENST00000476964 FAM26EQ8N5C1 309 aa6.71□□□□□ -1.34
SOX2-OT-207ENST00000476964 TP53I13Q8NBR0 393 aaPredicted RBP6.71□□□□□ -1.34
SOX2-OT-207ENST00000476964 UHMK1Q8TAS1 419 aaKnown RBP6.71□□□□□ -1.34
SOX2-OT-207ENST00000476964 SLC7A14Q8TBB6 771 aa6.71□□□□□ -1.34
SOX2-OT-207ENST00000476964 MRPL4Q9BYD3 311 aaKnown RBP6.71□□□□□ -1.34
SOX2-OT-207ENST00000476964 SLC52A2Q9HAB3 445 aa6.71□□□□□ -1.34
SOX2-OT-207ENST00000476964 PCDH18Q9HCL0 1135 aa6.71□□□□□ -1.34
SOX2-OT-207ENST00000476964 NGRNQ9NPE2 291 aaKnown RBP6.71□□□□□ -1.34
SOX2-OT-207ENST00000476964 MYOTQ9UBF9 498 aa6.71□□□□□ -1.34
SOX2-OT-207ENST00000476964 ASH2LQ9UBL3 628 aa6.71□□□□□ -1.34
SOX2-OT-207ENST00000476964 FAN1Q9Y2M0 1017 aa6.71□□□□□ -1.34
SOX2-OT-207ENST00000476964 PCDHB4Q9Y5E5 795 aa6.71□□□□□ -1.34
SOX2-OT-207ENST00000476964 SH3D21A4FU49 640 aa6.7□□□□□ -1.34
SOX2-OT-207ENST00000476964 NKRFO15226 690 aaKnown RBP eCLIP6.7□□□□□ -1.34
SOX2-OT-207ENST00000476964 COL6A2P12110 1019 aa6.7□□□□□ -1.34
SOX2-OT-207ENST00000476964 EPHA5P54756 1037 aa6.7□□□□□ -1.34
SOX2-OT-207ENST00000476964 SPIRE1Q08AE8 756 aa6.7□□□□□ -1.34
SOX2-OT-207ENST00000476964 TRIM48Q8IWZ4 208 aa6.7□□□□□ -1.34
SOX2-OT-207ENST00000476964 LINC01356Q8N9X3 169 aa6.7□□□□□ -1.34
SOX2-OT-207ENST00000476964 TTLL11Q8NHH1 800 aa6.7□□□□□ -1.34
SOX2-OT-207ENST00000476964 CLEC4DQ8WXI8 215 aa6.7□□□□□ -1.34
SOX2-OT-207ENST00000476964 NOX5Q96PH1 765 aa6.7□□□□□ -1.34
SOX2-OT-207ENST00000476964 KANSL2Q9H9L4 492 aa6.7□□□□□ -1.34
SOX2-OT-207ENST00000476964 TCRBV5S4A2TA0A5A2 114 aa6.69□□□□□ -1.34
SOX2-OT-207ENST00000476964 CRTAMO95727 393 aa6.69□□□□□ -1.34
SOX2-OT-207ENST00000476964 LRG1P02750 347 aa6.69□□□□□ -1.34
SOX2-OT-207ENST00000476964 CYP2C8P10632 490 aa6.69□□□□□ -1.34
SOX2-OT-207ENST00000476964 GUCY1A3Q02108 690 aa6.69□□□□□ -1.34
SOX2-OT-207ENST00000476964 FBLN7Q53RD9 439 aa6.69□□□□□ -1.34
SOX2-OT-207ENST00000476964 CD300LDQ6UXZ3 194 aa6.69□□□□□ -1.34
SOX2-OT-207ENST00000476964 C16orf59Q7L2K0 433 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms