RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 MYOCDQ8IZQ8 938 aa13.34□□□□□ -0.27
BRCA1-213ENST00000476777 BANK1Q8NDB2 785 aa13.34□□□□□ -0.27
BRCA1-213ENST00000476777 DBF4BQ8NFT6 615 aa13.34□□□□□ -0.27
BRCA1-213ENST00000476777 NSUN6Q8TEA1 469 aaKnown RBP13.34□□□□□ -0.27
BRCA1-213ENST00000476777 PABPC5Q96DU9 382 aaKnown RBP13.34□□□□□ -0.27
BRCA1-213ENST00000476777 IWS1Q96ST2 819 aa13.34□□□□□ -0.27
BRCA1-213ENST00000476777 KATNAL1Q9BW62 490 aa13.34□□□□□ -0.27
BRCA1-213ENST00000476777 MAF1Q9H063 256 aa13.34□□□□□ -0.27
BRCA1-213ENST00000476777 TOMM22Q9NS69 142 aa13.34□□□□□ -0.27
BRCA1-213ENST00000476777 PRKAG3Q9UGI9 489 aa13.34□□□□□ -0.27
BRCA1-213ENST00000476777 MYH7BA7E2Y1 1941 aa13.33□□□□□ -0.28
BRCA1-213ENST00000476777 WDR87Q6ZQQ6 2873 aa13.33□□□□□ -0.28
BRCA1-213ENST00000476777 H3BNC9 293 aa13.33□□□□□ -0.28
BRCA1-213ENST00000476777 HOXD8P13378 290 aaPredicted RBP13.33□□□□□ -0.28
BRCA1-213ENST00000476777 STXBP2Q15833 593 aa13.33□□□□□ -0.28
BRCA1-213ENST00000476777 TCEAL5Q5H9L2 206 aa13.33□□□□□ -0.28
BRCA1-213ENST00000476777 HFE2Q6ZVN8 426 aa13.33□□□□□ -0.28
BRCA1-213ENST00000476777 PPTC7Q8NI37 304 aa13.33□□□□□ -0.28
BRCA1-213ENST00000476777 TTC14Q96N46 770 aa13.33□□□□□ -0.28
BRCA1-213ENST00000476777 SAMD11Q96NU1 681 aa13.33□□□□□ -0.28
BRCA1-213ENST00000476777 RMDN3Q96TC7 470 aa13.33□□□□□ -0.28
BRCA1-213ENST00000476777 CPVLQ9H3G5 476 aa13.33□□□□□ -0.28
BRCA1-213ENST00000476777 EMSYQ7Z589 1322 aa13.33□□□□□ -0.28
BRCA1-213ENST00000476777 RSPH10B2B2RC85 870 aa13.32□□□□□ -0.28
BRCA1-213ENST00000476777 FGAP02671 866 aa13.32□□□□□ -0.28
BRCA1-213ENST00000476777 RSPH10BP0C881 870 aa13.32□□□□□ -0.28
BRCA1-213ENST00000476777 GOLGA8HP0CJ92 632 aa13.32□□□□□ -0.28
BRCA1-213ENST00000476777 GPM6BQ13491 265 aa13.32□□□□□ -0.28
BRCA1-213ENST00000476777 LAMC2Q13753 1193 aa13.32□□□□□ -0.28
BRCA1-213ENST00000476777 PLEKHG4Q58EX7 1191 aa13.32□□□□□ -0.28
BRCA1-213ENST00000476777 SERINC5Q86VE9 423 aa13.32□□□□□ -0.28
BRCA1-213ENST00000476777 ADHFE1Q8IWW8 467 aa13.32□□□□□ -0.28
BRCA1-213ENST00000476777 ANKS1AQ92625 1134 aa13.32□□□□□ -0.28
BRCA1-213ENST00000476777 UBA5Q9GZZ9 404 aa13.32□□□□□ -0.28
BRCA1-213ENST00000476777 FAM50BQ9Y247 325 aa13.32□□□□□ -0.28
BRCA1-213ENST00000476777 EIF3JO75822 258 aaKnown RBP13.31□□□□□ -0.28
BRCA1-213ENST00000476777 LTBRP36941 435 aa13.31□□□□□ -0.28
BRCA1-213ENST00000476777 THPOP40225 353 aa13.31□□□□□ -0.28
BRCA1-213ENST00000476777 CDC37Q16543 378 aaPredicted RBP13.31□□□□□ -0.28
BRCA1-213ENST00000476777 GPATCH4Q5T3I0 446 aaKnown RBP13.31□□□□□ -0.28
BRCA1-213ENST00000476777 EP400NLQ6ZTU2 488 aa13.31□□□□□ -0.28
BRCA1-213ENST00000476777 DHX37Q8IY37 1157 aaKnown RBP13.31□□□□□ -0.28
BRCA1-213ENST00000476777 TMEM192Q8IY95 271 aa13.31□□□□□ -0.28
BRCA1-213ENST00000476777 TOP1MTQ969P6 601 aa13.31□□□□□ -0.28
BRCA1-213ENST00000476777 YME1L1Q96TA2 773 aa13.31□□□□□ -0.28
BRCA1-213ENST00000476777 NSUN3Q9H649 340 aaKnown RBP13.31□□□□□ -0.28
BRCA1-213ENST00000476777 ABCB11O95342 1321 aa13.31□□□□□ -0.28
BRCA1-213ENST00000476777 PPFIA4O75335 1185 aa13.3□□□□□ -0.28
BRCA1-213ENST00000476777 NR3C2P08235 984 aa13.3□□□□□ -0.28
BRCA1-213ENST00000476777 EIF2AK2P19525 551 aaKnown RBP13.3□□□□□ -0.28
BRCA1-213ENST00000476777 MX1P20591 662 aa13.3□□□□□ -0.28
BRCA1-213ENST00000476777 IRS1P35568 1242 aa13.3□□□□□ -0.28
BRCA1-213ENST00000476777 ARHGEF16Q5VV41 709 aa13.3□□□□□ -0.28
BRCA1-213ENST00000476777 FBXO11Q86XK2 927 aa13.3□□□□□ -0.28
BRCA1-213ENST00000476777 MCF2L2Q86YR7 1114 aa13.3□□□□□ -0.28
BRCA1-213ENST00000476777 SNX27Q96L92 541 aa13.3□□□□□ -0.28
BRCA1-213ENST00000476777 UPF3BQ9BZI7 483 aaKnown RBP13.3□□□□□ -0.28
BRCA1-213ENST00000476777 HELLSQ9NRZ9 838 aa13.3□□□□□ -0.28
BRCA1-213ENST00000476777 CLDND1Q9NY35 253 aa13.3□□□□□ -0.28
BRCA1-213ENST00000476777 RCAN3Q9UKA8 241 aa13.3□□□□□ -0.28
BRCA1-213ENST00000476777 MRVI1Q9Y6F6 885 aa13.3□□□□□ -0.28
BRCA1-213ENST00000476777 NLRC5Q86WI3 1866 aa13.29□□□□□ -0.28
BRCA1-213ENST00000476777 FAM186AA6NE01 2351 aa13.29□□□□□ -0.28
BRCA1-213ENST00000476777 NCK2O43639 380 aa13.29□□□□□ -0.28
BRCA1-213ENST00000476777 RGS20O76081 388 aa13.29□□□□□ -0.28
BRCA1-213ENST00000476777 HOXC8P31273 242 aa13.29□□□□□ -0.28
BRCA1-213ENST00000476777 HAND2P61296 217 aa13.29□□□□□ -0.28
BRCA1-213ENST00000476777 CTC1Q2NKJ3 1217 aa13.29□□□□□ -0.28
BRCA1-213ENST00000476777 HSDL1Q3SXM5 330 aa13.29□□□□□ -0.28
BRCA1-213ENST00000476777 MYSM1Q5VVJ2 828 aa13.29□□□□□ -0.28
BRCA1-213ENST00000476777 RPAINQ86UA6 219 aa13.29□□□□□ -0.28
BRCA1-213ENST00000476777 ADGRF4Q8IZF3 695 aa13.29□□□□□ -0.28
BRCA1-213ENST00000476777 MIER1Q8N108 512 aa13.29□□□□□ -0.28
BRCA1-213ENST00000476777 MFSD14AQ96MC6 490 aa13.29□□□□□ -0.28
BRCA1-213ENST00000476777 C16orf70Q9BSU1 422 aa13.29□□□□□ -0.28
BRCA1-213ENST00000476777 OSBPL7Q9BZF2 842 aa13.29□□□□□ -0.28
BRCA1-213ENST00000476777 PXMP2Q9NR77 195 aa13.29□□□□□ -0.28
BRCA1-213ENST00000476777 COL4A6Q14031 1691 aa13.28□□□□□ -0.28
BRCA1-213ENST00000476777 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.28□□□□□ -0.28
BRCA1-213ENST00000476777 SORBS3O60504 671 aa13.28□□□□□ -0.28
BRCA1-213ENST00000476777 UPP2O95045 317 aa13.28□□□□□ -0.28
BRCA1-213ENST00000476777 HSPD1P10809 573 aaKnown RBP13.28□□□□□ -0.28
BRCA1-213ENST00000476777 PCP11498 1178 aaKnown RBP13.28□□□□□ -0.28
BRCA1-213ENST00000476777 SMAD2Q15796 467 aaKnown RBP13.28□□□□□ -0.28
BRCA1-213ENST00000476777 QRICH1Q2TAL8 776 aa13.28□□□□□ -0.28
BRCA1-213ENST00000476777 HERC4Q5GLZ8 1057 aaPredicted RBP13.28□□□□□ -0.28
BRCA1-213ENST00000476777 CELF3Q5SZQ8 465 aaKnown RBP13.28□□□□□ -0.28
BRCA1-213ENST00000476777 MFSD6Q6ZSS7 791 aa13.28□□□□□ -0.28
BRCA1-213ENST00000476777 TBC1D10CQ8IV04 446 aa13.28□□□□□ -0.28
BRCA1-213ENST00000476777 SEPT8Q92599 483 aa13.28□□□□□ -0.28
BRCA1-213ENST00000476777 ATP6V0A1Q93050 837 aa13.28□□□□□ -0.28
BRCA1-213ENST00000476777 EVI5LQ96CN4 794 aa13.28□□□□□ -0.28
BRCA1-213ENST00000476777 FAM227BQ96M60 508 aa13.28□□□□□ -0.28
BRCA1-213ENST00000476777 SPATA33Q96N06 139 aa13.28□□□□□ -0.28
BRCA1-213ENST00000476777 PHOX2BQ99453 314 aa13.28□□□□□ -0.28
BRCA1-213ENST00000476777 MUTYHQ9UIF7 546 aa13.28□□□□□ -0.28
BRCA1-213ENST00000476777 MRPL11Q9Y3B7 192 aaKnown RBP13.28□□□□□ -0.28
BRCA1-213ENST00000476777 MYH6P13533 1939 aa13.28□□□□□ -0.28
BRCA1-213ENST00000476777 ATG2AQ2TAZ0 1938 aa13.28□□□□□ -0.28
BRCA1-213ENST00000476777 ZMYM6O95789 1325 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms