RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 GH2P01242 217 aa18.32■□□□□ 0.52
TMEM53-208ENST00000476724 PNMA6AP0CW24 399 aaPredicted RBP18.32■□□□□ 0.52
TMEM53-208ENST00000476724 TNNI2P48788 182 aa18.32■□□□□ 0.52
TMEM53-208ENST00000476724 GMPSP49915 693 aaPredicted RBP18.32■□□□□ 0.52
TMEM53-208ENST00000476724 MCM6Q14566 821 aa18.32■□□□□ 0.52
TMEM53-208ENST00000476724 WHAMMP3Q1A5X7 153 aa18.32■□□□□ 0.52
TMEM53-208ENST00000476724 TMEM179Q6ZVK1 233 aa18.32■□□□□ 0.52
TMEM53-208ENST00000476724 KCTD1Q719H9 257 aa18.32■□□□□ 0.52
TMEM53-208ENST00000476724 CCDC170Q8IYT3 715 aa18.32■□□□□ 0.52
TMEM53-208ENST00000476724 ATRIPQ8WXE1 791 aa18.32■□□□□ 0.52
TMEM53-208ENST00000476724 SPON1Q9HCB6 807 aa18.32■□□□□ 0.52
TMEM53-208ENST00000476724 NYAP2Q9P242 653 aa18.32■□□□□ 0.52
TMEM53-208ENST00000476724 ZNF541Q9H0D2 1346 aa18.31■□□□□ 0.52
TMEM53-208ENST00000476724 CYLC1P35663 651 aaPredicted RBP18.31■□□□□ 0.52
TMEM53-208ENST00000476724 CDK17Q00537 523 aa18.31■□□□□ 0.52
TMEM53-208ENST00000476724 ICA1Q05084 483 aa18.31■□□□□ 0.52
TMEM53-208ENST00000476724 LRRC63Q05C16 580 aa18.31■□□□□ 0.52
TMEM53-208ENST00000476724 CCDC96Q2M329 555 aa18.31■□□□□ 0.52
TMEM53-208ENST00000476724 TMEM119Q4V9L6 283 aa18.31■□□□□ 0.52
TMEM53-208ENST00000476724 SNX29Q8TEQ0 813 aa18.31■□□□□ 0.52
TMEM53-208ENST00000476724 MKL1Q969V6 931 aa18.31■□□□□ 0.52
TMEM53-208ENST00000476724 PSTPIP2Q9H939 334 aa18.31■□□□□ 0.52
TMEM53-208ENST00000476724 PGAP2Q9UHJ9 254 aa18.31■□□□□ 0.52
TMEM53-208ENST00000476724 DDX25Q9UHL0 483 aaKnown RBP18.31■□□□□ 0.52
TMEM53-208ENST00000476724 RAD21O60216 631 aa18.3■□□□□ 0.52
TMEM53-208ENST00000476724 SLC16A2P36021 539 aa18.3■□□□□ 0.52
TMEM53-208ENST00000476724 ZNF280AP59817 542 aaPredicted RBP18.3■□□□□ 0.52
TMEM53-208ENST00000476724 FKBP1CQ5VVH2 108 aa18.3■□□□□ 0.52
TMEM53-208ENST00000476724 WDR59Q6PJI9 974 aa18.3■□□□□ 0.52
TMEM53-208ENST00000476724 SAMD7Q7Z3H4 446 aa18.3■□□□□ 0.52
TMEM53-208ENST00000476724 PARD6BQ9BYG5 372 aa18.3■□□□□ 0.52
TMEM53-208ENST00000476724 SEMA6BQ9H3T3 888 aa18.3■□□□□ 0.52
TMEM53-208ENST00000476724 SLC39A2Q9NP94 309 aa18.3■□□□□ 0.52
TMEM53-208ENST00000476724 HERC5Q9UII4 1024 aaKnown RBP18.3■□□□□ 0.52
TMEM53-208ENST00000476724 ASTN2O75129 1339 aaPredicted RBP18.3■□□□□ 0.52
TMEM53-208ENST00000476724 PPP1R11O60927 126 aaPredicted RBP18.3■□□□□ 0.52
TMEM53-208ENST00000476724 BRD3Q15059 726 aa18.3■□□□□ 0.52
TMEM53-208ENST00000476724 MIIPQ5JXC2 388 aa18.3■□□□□ 0.52
TMEM53-208ENST00000476724 MIGA2Q7L4E1 593 aa18.3■□□□□ 0.52
TMEM53-208ENST00000476724 MICALL2Q8IY33 904 aa18.3■□□□□ 0.52
TMEM53-208ENST00000476724 EHBP1Q8NDI1 1231 aa18.3■□□□□ 0.52
TMEM53-208ENST00000476724 FHDC1Q9C0D6 1143 aaPredicted RBP18.3■□□□□ 0.52
TMEM53-208ENST00000476724 NT5C3AQ9H0P0 336 aa18.3■□□□□ 0.52
TMEM53-208ENST00000476724 KDM3AQ9Y4C1 1321 aa18.29■□□□□ 0.52
TMEM53-208ENST00000476724 HYIQ5T013 277 aa18.29■□□□□ 0.52
TMEM53-208ENST00000476724 MCTP2Q6DN12 878 aa18.29■□□□□ 0.52
TMEM53-208ENST00000476724 CC2D1AQ6P1N0 951 aaPredicted RBP18.29■□□□□ 0.52
TMEM53-208ENST00000476724 FAM83AQ86UY5 434 aa18.29■□□□□ 0.52
TMEM53-208ENST00000476724 DCAF4Q8WV16 495 aa18.29■□□□□ 0.52
TMEM53-208ENST00000476724 ARFGAP3Q9NP61 516 aa18.29■□□□□ 0.52
TMEM53-208ENST00000476724 REXO2Q9Y3B8 237 aaKnown RBP18.29■□□□□ 0.52
TMEM53-208ENST00000476724 CCDC151A5D8V7 595 aa18.29■□□□□ 0.52
TMEM53-208ENST00000476724 POTEMA6NI47 508 aa18.29■□□□□ 0.52
TMEM53-208ENST00000476724 USP17L10C9JJH3 530 aa18.29■□□□□ 0.52
TMEM53-208ENST00000476724 MARCH6O60337 910 aa18.29■□□□□ 0.52
TMEM53-208ENST00000476724 IPO7O95373 1038 aaKnown RBP18.29■□□□□ 0.52
TMEM53-208ENST00000476724 TUBBP07437 444 aa18.29■□□□□ 0.52
TMEM53-208ENST00000476724 RPS12P25398 132 aaKnown RBP18.29■□□□□ 0.52
TMEM53-208ENST00000476724 USP11P51784 963 aa18.29■□□□□ 0.52
TMEM53-208ENST00000476724 EHHADHQ08426 723 aa18.29■□□□□ 0.52
TMEM53-208ENST00000476724 UBE2SQ16763 222 aa18.29■□□□□ 0.52
TMEM53-208ENST00000476724 TBC1D10BQ4KMP7 808 aaPredicted RBP18.29■□□□□ 0.52
TMEM53-208ENST00000476724 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.29■□□□□ 0.52
TMEM53-208ENST00000476724 CNOT7Q9UIV1 285 aaKnown RBP18.29■□□□□ 0.52
TMEM53-208ENST00000476724 PCDHA12Q9UN75 941 aa18.29■□□□□ 0.52
TMEM53-208ENST00000476724 MYH7BA7E2Y1 1941 aa18.28■□□□□ 0.52
TMEM53-208ENST00000476724 DICER1Q9UPY3 1922 aaKnown RBP18.28■□□□□ 0.52
TMEM53-208ENST00000476724 A0A1W2PRG0 241 aa18.28■□□□□ 0.52
TMEM53-208ENST00000476724 EIF3CLB5ME19 914 aaKnown RBP18.28■□□□□ 0.52
TMEM53-208ENST00000476724 KRT86O43790 486 aa18.28■□□□□ 0.52
TMEM53-208ENST00000476724 SBF1O95248 1867 aa18.28■□□□□ 0.52
TMEM53-208ENST00000476724 VWA3BQ502W6 1294 aa18.28■□□□□ 0.52
TMEM53-208ENST00000476724 SLFN13Q68D06 897 aa18.28■□□□□ 0.52
TMEM53-208ENST00000476724 CCDC84Q86UT8 332 aaPredicted RBP18.28■□□□□ 0.52
TMEM53-208ENST00000476724 DDX12PQ92771 950 aa18.28■□□□□ 0.52
TMEM53-208ENST00000476724 HAS1Q92839 578 aa18.28■□□□□ 0.52
TMEM53-208ENST00000476724 PCMTD1Q96MG8 357 aaPredicted RBP18.28■□□□□ 0.52
TMEM53-208ENST00000476724 EIF3CQ99613 913 aaKnown RBP18.28■□□□□ 0.52
TMEM53-208ENST00000476724 TSG101Q99816 390 aa18.28■□□□□ 0.52
TMEM53-208ENST00000476724 BMP2KQ9NSY1 1161 aaPredicted RBP18.28■□□□□ 0.52
TMEM53-208ENST00000476724 AGPAT5Q9NUQ2 364 aa18.28■□□□□ 0.52
TMEM53-208ENST00000476724 RASSF10A6NK89 507 aa18.27■□□□□ 0.52
TMEM53-208ENST00000476724 ABL1P00519 1130 aa18.27■□□□□ 0.52
TMEM53-208ENST00000476724 MAN2A1Q16706 1144 aa18.27■□□□□ 0.52
TMEM53-208ENST00000476724 ARHGAP27Q6ZUM4 889 aa18.27■□□□□ 0.52
TMEM53-208ENST00000476724 DYMQ7RTS9 669 aa18.27■□□□□ 0.52
TMEM53-208ENST00000476724 CTAGE15A4D2H0 777 aa18.27■□□□□ 0.51
TMEM53-208ENST00000476724 CTAGE8P0CG41 777 aa18.27■□□□□ 0.51
TMEM53-208ENST00000476724 HNRNPH3P31942 346 aaKnown RBP18.27■□□□□ 0.51
TMEM53-208ENST00000476724 RASA3Q14644 834 aa18.27■□□□□ 0.51
TMEM53-208ENST00000476724 MOXD1Q6UVY6 613 aa18.27■□□□□ 0.51
TMEM53-208ENST00000476724 CTAGE6Q86UF2 777 aa18.27■□□□□ 0.51
TMEM53-208ENST00000476724 CTAGE4Q8IX94 777 aa18.27■□□□□ 0.51
TMEM53-208ENST00000476724 PIAS4Q8N2W9 510 aaPredicted RBP18.27■□□□□ 0.51
TMEM53-208ENST00000476724 MSANTD4Q8NCY6 345 aa18.27■□□□□ 0.51
TMEM53-208ENST00000476724 HNRNPLLQ8WVV9 542 aaKnown RBP18.27■□□□□ 0.51
TMEM53-208ENST00000476724 NUDT12Q9BQG2 462 aa18.27■□□□□ 0.51
TMEM53-208ENST00000476724 MYO6Q9UM54 1294 aa18.27■□□□□ 0.51
TMEM53-208ENST00000476724 GUCA1BQ9UMX6 200 aa18.27■□□□□ 0.51
TMEM53-208ENST00000476724 F5H6K3 240 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms