RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 PCK1P35558 622 aa15.15■□□□□ 0.02
HDAC1-206ENST00000476391 GNAQP50148 359 aa15.15■□□□□ 0.02
HDAC1-206ENST00000476391 TYW1BQ6NUM6 668 aa15.15■□□□□ 0.02
HDAC1-206ENST00000476391 NBPF15Q8N660 670 aa15.15■□□□□ 0.02
HDAC1-206ENST00000476391 MIPOL1Q8TD10 442 aa15.15■□□□□ 0.02
HDAC1-206ENST00000476391 FBF1Q8TES7 1133 aa15.15■□□□□ 0.02
HDAC1-206ENST00000476391 ERGIC2Q96RQ1 377 aa15.15■□□□□ 0.02
HDAC1-206ENST00000476391 ELAC2Q9BQ52 826 aaKnown RBP15.15■□□□□ 0.02
HDAC1-206ENST00000476391 UBAC1Q9BSL1 405 aa15.15■□□□□ 0.02
HDAC1-206ENST00000476391 G3BP2Q9UN86 482 aaKnown RBP15.15■□□□□ 0.02
HDAC1-206ENST00000476391 METP08581 1390 aa15.15■□□□□ 0.02
HDAC1-206ENST00000476391 NID2Q14112 1375 aa15.15■□□□□ 0.02
HDAC1-206ENST00000476391 PIK3C2AO00443 1686 aa15.15■□□□□ 0.02
HDAC1-206ENST00000476391 UPP2O95045 317 aa15.15■□□□□ 0.02
HDAC1-206ENST00000476391 CHN1P15882 459 aa15.15■□□□□ 0.02
HDAC1-206ENST00000476391 HOXC9P31274 260 aa15.15■□□□□ 0.02
HDAC1-206ENST00000476391 PDXDC2PQ6P474 469 aa15.15■□□□□ 0.02
HDAC1-206ENST00000476391 ASRGL1Q7L266 308 aa15.15■□□□□ 0.02
HDAC1-206ENST00000476391 HOOK3Q86VS8 718 aa15.15■□□□□ 0.02
HDAC1-206ENST00000476391 LRRC34Q8IZ02 419 aa15.15■□□□□ 0.02
HDAC1-206ENST00000476391 USP38Q8NB14 1042 aa15.15■□□□□ 0.02
HDAC1-206ENST00000476391 MDM1Q8TC05 714 aa15.15■□□□□ 0.02
HDAC1-206ENST00000476391 IGDCC4Q8TDY8 1250 aa15.15■□□□□ 0.02
HDAC1-206ENST00000476391 STAMQ92783 540 aa15.15■□□□□ 0.02
HDAC1-206ENST00000476391 MTMR8Q96EF0 704 aa15.15■□□□□ 0.02
HDAC1-206ENST00000476391 SALL4Q9UJQ4 1053 aa15.15■□□□□ 0.02
HDAC1-206ENST00000476391 A0A1B0GVG6 124 aa15.14■□□□□ 0.01
HDAC1-206ENST00000476391 TRIM49BA6NDI0 452 aa15.14■□□□□ 0.01
HDAC1-206ENST00000476391 A8MUI8 341 aa15.14■□□□□ 0.01
HDAC1-206ENST00000476391 CES2O00748 559 aa15.14■□□□□ 0.01
HDAC1-206ENST00000476391 DEXIO95424 95 aa15.14■□□□□ 0.01
HDAC1-206ENST00000476391 ACADSP16219 412 aa15.14■□□□□ 0.01
HDAC1-206ENST00000476391 SP100P23497 879 aaPredicted RBP15.14■□□□□ 0.01
HDAC1-206ENST00000476391 LIFRP42702 1097 aa15.14■□□□□ 0.01
HDAC1-206ENST00000476391 MMP13P45452 471 aa15.14■□□□□ 0.01
HDAC1-206ENST00000476391 TUBP50607 506 aa15.14■□□□□ 0.01
HDAC1-206ENST00000476391 SESTD1Q86VW0 696 aa15.14■□□□□ 0.01
HDAC1-206ENST00000476391 MAIP1Q8WWC4 291 aa15.14■□□□□ 0.01
HDAC1-206ENST00000476391 APPBP2Q92624 585 aa15.14■□□□□ 0.01
HDAC1-206ENST00000476391 KIFAP3Q92845 792 aa15.14■□□□□ 0.01
HDAC1-206ENST00000476391 PCMTD1Q96MG8 357 aaPredicted RBP15.14■□□□□ 0.01
HDAC1-206ENST00000476391 PCMTD2Q9NV79 361 aa15.14■□□□□ 0.01
HDAC1-206ENST00000476391 DIP2CQ9Y2E4 1556 aa15.14■□□□□ 0.01
HDAC1-206ENST00000476391 GSTA2P09210 222 aa15.14■□□□□ 0.01
HDAC1-206ENST00000476391 GUCY1A2P33402 732 aa15.14■□□□□ 0.01
HDAC1-206ENST00000476391 ABCD1P33897 745 aa15.14■□□□□ 0.01
HDAC1-206ENST00000476391 PSMC4P43686 418 aa15.14■□□□□ 0.01
HDAC1-206ENST00000476391 AIMP1Q12904 312 aaKnown RBP15.14■□□□□ 0.01
HDAC1-206ENST00000476391 LY9Q9HBG7 655 aa15.14■□□□□ 0.01
HDAC1-206ENST00000476391 GDAQ9Y2T3 454 aa15.14■□□□□ 0.01
HDAC1-206ENST00000476391 RICTORQ6R327 1708 aa15.13■□□□□ 0.01
HDAC1-206ENST00000476391 LMO7Q8WWI1 1683 aa15.13■□□□□ 0.01
HDAC1-206ENST00000476391 MAP3K13O43283 966 aa15.13■□□□□ 0.01
HDAC1-206ENST00000476391 SNX3O60493 162 aa15.13■□□□□ 0.01
HDAC1-206ENST00000476391 EIF4A3P38919 411 aaKnown RBP15.13■□□□□ 0.01
HDAC1-206ENST00000476391 SKIV2L2P42285 1042 aaKnown RBP15.13■□□□□ 0.01
HDAC1-206ENST00000476391 KLK7P49862 253 aa15.13■□□□□ 0.01
HDAC1-206ENST00000476391 PDE6CP51160 858 aa15.13■□□□□ 0.01
HDAC1-206ENST00000476391 TMEM154Q6P9G4 183 aa15.13■□□□□ 0.01
HDAC1-206ENST00000476391 C2CD5Q86YS7 1000 aa15.13■□□□□ 0.01
HDAC1-206ENST00000476391 LPIN2Q92539 896 aa15.13■□□□□ 0.01
HDAC1-206ENST00000476391 IFT43Q96FT9 208 aa15.13■□□□□ 0.01
HDAC1-206ENST00000476391 TRIM47Q96LD4 638 aa15.13■□□□□ 0.01
HDAC1-206ENST00000476391 MTRQ99707 1265 aa15.13■□□□□ 0.01
HDAC1-206ENST00000476391 ZWILCHQ9H900 591 aa15.13■□□□□ 0.01
HDAC1-206ENST00000476391 PHF24Q9UPV7 400 aa15.13■□□□□ 0.01
HDAC1-206ENST00000476391 MAPK8IP1Q9UQF2 711 aa15.13■□□□□ 0.01
HDAC1-206ENST00000476391 STK38LQ9Y2H1 464 aa15.13■□□□□ 0.01
HDAC1-206ENST00000476391 SLC12A7Q9Y666 1083 aa15.13■□□□□ 0.01
HDAC1-206ENST00000476391 MYH2Q9UKX2 1941 aa15.13■□□□□ 0.01
HDAC1-206ENST00000476391 F8VZ95 297 aa15.13■□□□□ 0.01
HDAC1-206ENST00000476391 OAS1P00973 400 aaKnown RBP15.13■□□□□ 0.01
HDAC1-206ENST00000476391 CALB2P22676 271 aa15.13■□□□□ 0.01
HDAC1-206ENST00000476391 TMC3Q7Z5M5 1100 aa15.13■□□□□ 0.01
HDAC1-206ENST00000476391 ZSCAN29Q8IWY8 852 aaPredicted RBP15.13■□□□□ 0.01
HDAC1-206ENST00000476391 RAB3IPQ96QF0 476 aaPredicted RBP15.13■□□□□ 0.01
HDAC1-206ENST00000476391 METTL22Q9BUU2 404 aaPredicted RBP15.13■□□□□ 0.01
HDAC1-206ENST00000476391 RNPEPL1Q9HAU8 725 aa15.13■□□□□ 0.01
HDAC1-206ENST00000476391 DMAP1Q9NPF5 467 aaPredicted RBP15.13■□□□□ 0.01
HDAC1-206ENST00000476391 BCL9O00512 1426 aa15.12■□□□□ 0.01
HDAC1-206ENST00000476391 PSMA7O14818 248 aa15.12■□□□□ 0.01
HDAC1-206ENST00000476391 TPP2P29144 1249 aaPredicted RBP15.12■□□□□ 0.01
HDAC1-206ENST00000476391 PLS1Q14651 629 aa15.12■□□□□ 0.01
HDAC1-206ENST00000476391 DPY19L2Q6NUT2 758 aa15.12■□□□□ 0.01
HDAC1-206ENST00000476391 FAM114A1Q8IWE2 563 aa15.12■□□□□ 0.01
HDAC1-206ENST00000476391 KLHL7Q8IXQ5 586 aa15.12■□□□□ 0.01
HDAC1-206ENST00000476391 KCNV2Q8TDN2 545 aa15.12■□□□□ 0.01
HDAC1-206ENST00000476391 PNMA2Q9UL42 364 aa15.12■□□□□ 0.01
HDAC1-206ENST00000476391 MYH6P13533 1939 aa15.12■□□□□ 0.01
HDAC1-206ENST00000476391 NFAT5O94916 1531 aa15.12■□□□□ 0.01
HDAC1-206ENST00000476391 EIF4E1BA6NMX2 242 aaKnown RBP15.12■□□□□ 0.01
HDAC1-206ENST00000476391 O00370 1275 aa15.12■□□□□ 0.01
HDAC1-206ENST00000476391 MYBL1P10243 752 aa15.12■□□□□ 0.01
HDAC1-206ENST00000476391 PMS1P54277 932 aaKnown RBP15.12■□□□□ 0.01
HDAC1-206ENST00000476391 POLE2P56282 527 aa15.12■□□□□ 0.01
HDAC1-206ENST00000476391 TIMM10P62072 90 aa15.12■□□□□ 0.01
HDAC1-206ENST00000476391 SFSWAPQ12872 951 aaKnown RBP15.12■□□□□ 0.01
HDAC1-206ENST00000476391 TSNAXIP1Q2TAA8 658 aa15.12■□□□□ 0.01
HDAC1-206ENST00000476391 ACBD5Q5T8D3 534 aaPredicted RBP15.12■□□□□ 0.01
HDAC1-206ENST00000476391 MEI1Q5TIA1 1274 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms