RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 REXO2Q9Y3B8 237 aaKnown RBP9.93□□□□□ -0.82
CCDC66-216ENST00000476142 SCN9AQ15858 1988 aa9.93□□□□□ -0.82
CCDC66-216ENST00000476142 A0A1W2PRG0 241 aa9.92□□□□□ -0.82
CCDC66-216ENST00000476142 RASSF10A6NK89 507 aa9.92□□□□□ -0.82
CCDC66-216ENST00000476142 ENTPD3O75355 529 aa9.92□□□□□ -0.82
CCDC66-216ENST00000476142 ECE1P42892 770 aa9.92□□□□□ -0.82
CCDC66-216ENST00000476142 CHMP4BP1P59074 171 aa9.92□□□□□ -0.82
CCDC66-216ENST00000476142 ZBED6P86452 979 aa9.92□□□□□ -0.82
CCDC66-216ENST00000476142 AP3B2Q13367 1082 aa9.92□□□□□ -0.82
CCDC66-216ENST00000476142 ZYXQ15942 572 aaKnown RBP9.92□□□□□ -0.82
CCDC66-216ENST00000476142 COBLL1Q53SF7 1204 aa9.92□□□□□ -0.82
CCDC66-216ENST00000476142 HERC4Q5GLZ8 1057 aaPredicted RBP9.92□□□□□ -0.82
CCDC66-216ENST00000476142 TMCO3Q6UWJ1 677 aa9.92□□□□□ -0.82
CCDC66-216ENST00000476142 SLFN12Q8IYM2 578 aa9.92□□□□□ -0.82
CCDC66-216ENST00000476142 SUPT20HQ8NEM7 779 aa9.92□□□□□ -0.82
CCDC66-216ENST00000476142 GMCL1Q96IK5 515 aa9.92□□□□□ -0.82
CCDC66-216ENST00000476142 NDST4Q9H3R1 872 aa9.92□□□□□ -0.82
CCDC66-216ENST00000476142 NHEJ1Q9H9Q4 299 aaPredicted RBP9.92□□□□□ -0.82
CCDC66-216ENST00000476142 KCNMB3Q9NPA1 279 aa9.92□□□□□ -0.82
CCDC66-216ENST00000476142 TRAF5O00463 557 aa9.92□□□□□ -0.82
CCDC66-216ENST00000476142 MED24O75448 989 aa9.92□□□□□ -0.82
CCDC66-216ENST00000476142 SEC31AO94979 1220 aaKnown RBP9.92□□□□□ -0.82
CCDC66-216ENST00000476142 LRRC63Q05C16 580 aa9.92□□□□□ -0.82
CCDC66-216ENST00000476142 PSMD2Q13200 908 aa9.92□□□□□ -0.82
CCDC66-216ENST00000476142 CCDC40Q4G0X9 1142 aa9.92□□□□□ -0.82
CCDC66-216ENST00000476142 CCDC122Q5T0U0 273 aa9.92□□□□□ -0.82
CCDC66-216ENST00000476142 CCDC174Q6PII3 467 aa9.92□□□□□ -0.82
CCDC66-216ENST00000476142 CCDC65Q8IXS2 484 aa9.92□□□□□ -0.82
CCDC66-216ENST00000476142 LARGE2Q8N3Y3 721 aa9.92□□□□□ -0.82
CCDC66-216ENST00000476142 RETREG2Q8NC44 543 aa9.92□□□□□ -0.82
CCDC66-216ENST00000476142 DNAJC19Q96DA6 116 aa9.92□□□□□ -0.82
CCDC66-216ENST00000476142 FGFBP2Q9BYJ0 223 aa9.92□□□□□ -0.82
CCDC66-216ENST00000476142 TTYH3Q9C0H2 523 aa9.92□□□□□ -0.82
CCDC66-216ENST00000476142 ZNF277Q9NRM2 450 aaPredicted RBP9.92□□□□□ -0.82
CCDC66-216ENST00000476142 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.92□□□□□ -0.82
CCDC66-216ENST00000476142 CDC23Q9UJX2 597 aa9.92□□□□□ -0.82
CCDC66-216ENST00000476142 ZBTB12Q9Y330 459 aaPredicted RBP9.92□□□□□ -0.82
CCDC66-216ENST00000476142 FAM86B1E9PN63 330 aa9.92□□□□□ -0.82
CCDC66-216ENST00000476142 NPM3O75607 178 aaKnown RBP9.92□□□□□ -0.82
CCDC66-216ENST00000476142 FAM86B2P0C5J1 330 aa9.92□□□□□ -0.82
CCDC66-216ENST00000476142 CYLC1P35663 651 aaPredicted RBP9.92□□□□□ -0.82
CCDC66-216ENST00000476142 HERVK_113P62684 666 aa9.92□□□□□ -0.82
CCDC66-216ENST00000476142 DLGAP5Q15398 846 aa9.92□□□□□ -0.82
CCDC66-216ENST00000476142 MAN2A1Q16706 1144 aa9.92□□□□□ -0.82
CCDC66-216ENST00000476142 ACER1Q8TDN7 264 aa9.92□□□□□ -0.82
CCDC66-216ENST00000476142 PDGFDQ9GZP0 370 aaPredicted RBP9.92□□□□□ -0.82
CCDC66-216ENST00000476142 PRR12Q9ULL5 1215 aa9.92□□□□□ -0.82
CCDC66-216ENST00000476142 ENC1O14682 589 aa9.91□□□□□ -0.82
CCDC66-216ENST00000476142 EPHB6O15197 1021 aa9.91□□□□□ -0.82
CCDC66-216ENST00000476142 KRT83P78385 493 aa9.91□□□□□ -0.82
CCDC66-216ENST00000476142 CYP27A1Q02318 531 aa9.91□□□□□ -0.82
CCDC66-216ENST00000476142 CYP4A11Q02928 519 aa9.91□□□□□ -0.82
CCDC66-216ENST00000476142 PABPC4Q13310 644 aaKnown RBP eCLIP9.91□□□□□ -0.82
CCDC66-216ENST00000476142 FAM83BQ5T0W9 1011 aa9.91□□□□□ -0.82
CCDC66-216ENST00000476142 HAUS3Q68CZ6 603 aa9.91□□□□□ -0.82
CCDC66-216ENST00000476142 SRGAP1Q7Z6B7 1085 aa9.91□□□□□ -0.82
CCDC66-216ENST00000476142 KRT222Q8N1A0 295 aa9.91□□□□□ -0.82
CCDC66-216ENST00000476142 OGFOD1Q8N543 542 aa9.91□□□□□ -0.82
CCDC66-216ENST00000476142 CCDC155Q8N6L0 562 aa9.91□□□□□ -0.82
CCDC66-216ENST00000476142 ERMNQ8TAM6 284 aa9.91□□□□□ -0.82
CCDC66-216ENST00000476142 JAKMIP2Q96AA8 810 aa9.91□□□□□ -0.82
CCDC66-216ENST00000476142 ERGIC2Q96RQ1 377 aa9.91□□□□□ -0.82
CCDC66-216ENST00000476142 ARHGEF10LQ9HCE6 1279 aa9.91□□□□□ -0.82
CCDC66-216ENST00000476142 CYP3A7-CYP3A51PA0A087WV96 503 aa9.91□□□□□ -0.82
CCDC66-216ENST00000476142 SPDYE2BA6NHP3 402 aa9.91□□□□□ -0.82
CCDC66-216ENST00000476142 PSMD14O00487 310 aa9.91□□□□□ -0.82
CCDC66-216ENST00000476142 CFBP00751 764 aa9.91□□□□□ -0.82
CCDC66-216ENST00000476142 SPDYE6P0CI01 402 aa9.91□□□□□ -0.82
CCDC66-216ENST00000476142 CYP3A7P24462 503 aa9.91□□□□□ -0.82
CCDC66-216ENST00000476142 STAT2P52630 851 aa9.91□□□□□ -0.82
CCDC66-216ENST00000476142 RSBN1LQ6PCB5 846 aaPredicted RBP9.91□□□□□ -0.82
CCDC66-216ENST00000476142 LRRC55Q6ZSA7 311 aa9.91□□□□□ -0.82
CCDC66-216ENST00000476142 MIGA2Q7L4E1 593 aa9.91□□□□□ -0.82
CCDC66-216ENST00000476142 RSRC2Q7L4I2 434 aaKnown RBP9.91□□□□□ -0.82
CCDC66-216ENST00000476142 CATSPER3Q86XQ3 398 aa9.91□□□□□ -0.82
CCDC66-216ENST00000476142 GPR161Q8N6U8 529 aaKnown RBP9.91□□□□□ -0.82
CCDC66-216ENST00000476142 CEP112Q8N8E3 955 aa9.91□□□□□ -0.82
CCDC66-216ENST00000476142 CYP2W1Q8TAV3 490 aa9.91□□□□□ -0.82
CCDC66-216ENST00000476142 SMCR8Q8TEV9 937 aaPredicted RBP9.91□□□□□ -0.82
CCDC66-216ENST00000476142 CCDC42Q96M95 316 aa9.91□□□□□ -0.82
CCDC66-216ENST00000476142 SIPA1L1O43166 1804 aa9.91□□□□□ -0.82
CCDC66-216ENST00000476142 ATRNL1Q5VV63 1379 aa9.91□□□□□ -0.82
CCDC66-216ENST00000476142 GREB1LQ9C091 1923 aaPredicted RBP9.91□□□□□ -0.82
CCDC66-216ENST00000476142 MACROD2A1Z1Q3 448 aa9.9□□□□□ -0.82
CCDC66-216ENST00000476142 PLEKP08567 350 aaPredicted RBP9.9□□□□□ -0.82
CCDC66-216ENST00000476142 CYP11B2P19099 503 aa9.9□□□□□ -0.82
CCDC66-216ENST00000476142 PSMC6P62333 389 aa9.9□□□□□ -0.82
CCDC66-216ENST00000476142 UBXN2AP68543 259 aa9.9□□□□□ -0.82
CCDC66-216ENST00000476142 EHHADHQ08426 723 aa9.9□□□□□ -0.82
CCDC66-216ENST00000476142 BMS1Q14692 1282 aaKnown RBP9.9□□□□□ -0.82
CCDC66-216ENST00000476142 MEA1Q16626 185 aa9.9□□□□□ -0.82
CCDC66-216ENST00000476142 KIAA1755Q5JYT7 1200 aa9.9□□□□□ -0.82
CCDC66-216ENST00000476142 HYIQ5T013 277 aa9.9□□□□□ -0.82
CCDC66-216ENST00000476142 RRAGAQ7L523 313 aa9.9□□□□□ -0.82
CCDC66-216ENST00000476142 SMAP1Q8IYB5 467 aaPredicted RBP9.9□□□□□ -0.82
CCDC66-216ENST00000476142 ETNPPLQ8TBG4 499 aa9.9□□□□□ -0.82
CCDC66-216ENST00000476142 RABGGTAQ92696 567 aa9.9□□□□□ -0.82
CCDC66-216ENST00000476142 PARD6BQ9BYG5 372 aa9.9□□□□□ -0.82
CCDC66-216ENST00000476142 DEF6Q9H4E7 631 aa9.9□□□□□ -0.82
CCDC66-216ENST00000476142 HAUS4Q9H6D7 363 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms