RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 COASYQ13057 564 aa18.51■□□□□ 0.55
TVP23B-202ENST00000476139 FAM114A1Q8IWE2 563 aa18.51■□□□□ 0.55
TVP23B-202ENST00000476139 SLC35F6Q8N357 371 aa18.51■□□□□ 0.55
TVP23B-202ENST00000476139 GUF1Q8N442 669 aaKnown RBP18.51■□□□□ 0.55
TVP23B-202ENST00000476139 PANK4Q9NVE7 773 aa18.51■□□□□ 0.55
TVP23B-202ENST00000476139 ARGLU1Q9NWB6 273 aaPredicted RBP18.51■□□□□ 0.55
TVP23B-202ENST00000476139 SCAF8Q9UPN6 1271 aaKnown RBP18.51■□□□□ 0.55
TVP23B-202ENST00000476139 SRCAPQ6ZRS2 3230 aa18.51■□□□□ 0.55
TVP23B-202ENST00000476139 SPDYE2BA6NHP3 402 aa18.51■□□□□ 0.55
TVP23B-202ENST00000476139 SPDYE6P0CI01 402 aa18.51■□□□□ 0.55
TVP23B-202ENST00000476139 PARD6BQ9BYG5 372 aa18.51■□□□□ 0.55
TVP23B-202ENST00000476139 CYP3A7-CYP3A51PA0A087WV96 503 aa18.5■□□□□ 0.55
TVP23B-202ENST00000476139 POTEFA5A3E0 1075 aa18.5■□□□□ 0.55
TVP23B-202ENST00000476139 ERICH4A6NGS2 130 aa18.5■□□□□ 0.55
TVP23B-202ENST00000476139 POTEIP0CG38 1075 aa18.5■□□□□ 0.55
TVP23B-202ENST00000476139 CYP3A7P24462 503 aa18.5■□□□□ 0.55
TVP23B-202ENST00000476139 PPP1R2P41236 205 aa18.5■□□□□ 0.55
TVP23B-202ENST00000476139 PSMC6P62333 389 aa18.5■□□□□ 0.55
TVP23B-202ENST00000476139 KIF4BQ2VIQ3 1234 aa18.5■□□□□ 0.55
TVP23B-202ENST00000476139 POTEGQ6S5H5 508 aa18.5■□□□□ 0.55
TVP23B-202ENST00000476139 POTEEQ6S8J3 1075 aa18.5■□□□□ 0.55
TVP23B-202ENST00000476139 SLC30A10Q6XR72 485 aa18.5■□□□□ 0.55
TVP23B-202ENST00000476139 MIGA2Q7L4E1 593 aa18.5■□□□□ 0.55
TVP23B-202ENST00000476139 GPIHBP1Q8IV16 184 aa18.5■□□□□ 0.55
TVP23B-202ENST00000476139 TBC1D5Q92609 795 aa18.5■□□□□ 0.55
TVP23B-202ENST00000476139 GLT8D2Q9H1C3 349 aa18.5■□□□□ 0.55
TVP23B-202ENST00000476139 ZCCHC17Q9NP64 241 aaKnown RBP18.5■□□□□ 0.55
TVP23B-202ENST00000476139 PRR12Q9ULL5 1215 aa18.5■□□□□ 0.55
TVP23B-202ENST00000476139 MEIS1O00470 390 aa18.5■□□□□ 0.55
TVP23B-202ENST00000476139 EPHB6O15197 1021 aa18.5■□□□□ 0.55
TVP23B-202ENST00000476139 PLA2G4BP0C869 781 aa18.5■□□□□ 0.55
TVP23B-202ENST00000476139 CCDC155Q8N6L0 562 aa18.5■□□□□ 0.55
TVP23B-202ENST00000476139 ETNPPLQ8TBG4 499 aa18.5■□□□□ 0.55
TVP23B-202ENST00000476139 LENG9Q96B70 501 aa18.5■□□□□ 0.55
TVP23B-202ENST00000476139 STK32BQ9NY57 414 aa18.5■□□□□ 0.55
TVP23B-202ENST00000476139 SASH3O75995 380 aa18.49■□□□□ 0.55
TVP23B-202ENST00000476139 TSR1Q2NL82 804 aaKnown RBP18.49■□□□□ 0.55
TVP23B-202ENST00000476139 RSBN1LQ6PCB5 846 aaPredicted RBP18.49■□□□□ 0.55
TVP23B-202ENST00000476139 SAMD1Q6SPF0 538 aaPredicted RBP18.49■□□□□ 0.55
TVP23B-202ENST00000476139 CATSPER3Q86XQ3 398 aa18.49■□□□□ 0.55
TVP23B-202ENST00000476139 NDST4Q9H3R1 872 aa18.49■□□□□ 0.55
TVP23B-202ENST00000476139 GUCA1BQ9UMX6 200 aa18.49■□□□□ 0.55
TVP23B-202ENST00000476139 ZNF646O15015 1829 aaPredicted RBP18.49■□□□□ 0.55
TVP23B-202ENST00000476139 SMCHD1A6NHR9 2005 aa18.49■□□□□ 0.55
TVP23B-202ENST00000476139 SPDYE3A6NKU9 549 aa18.49■□□□□ 0.55
TVP23B-202ENST00000476139 ZRANB2O95218 330 aaKnown RBP eCLIP18.49■□□□□ 0.55
TVP23B-202ENST00000476139 GABPB1Q06547 395 aaPredicted RBP18.49■□□□□ 0.55
TVP23B-202ENST00000476139 SPIRE1Q08AE8 756 aa18.49■□□□□ 0.55
TVP23B-202ENST00000476139 ZYXQ15942 572 aaKnown RBP18.49■□□□□ 0.55
TVP23B-202ENST00000476139 VWA3BQ502W6 1294 aa18.49■□□□□ 0.55
TVP23B-202ENST00000476139 HYIQ5T013 277 aa18.49■□□□□ 0.55
TVP23B-202ENST00000476139 SUPT20HQ8NEM7 779 aa18.49■□□□□ 0.55
TVP23B-202ENST00000476139 NT5C3AQ9H0P0 336 aa18.49■□□□□ 0.55
TVP23B-202ENST00000476139 FAM207AQ9NSI2 230 aaPredicted RBP18.49■□□□□ 0.55
TVP23B-202ENST00000476139 AP3B2Q13367 1082 aa18.48■□□□□ 0.55
TVP23B-202ENST00000476139 LRRC55Q6ZSA7 311 aa18.48■□□□□ 0.55
TVP23B-202ENST00000476139 NELFCDQ8IXH7 590 aa18.48■□□□□ 0.55
TVP23B-202ENST00000476139 LARGE2Q8N3Y3 721 aa18.48■□□□□ 0.55
TVP23B-202ENST00000476139 MBOAT7Q96N66 472 aa18.48■□□□□ 0.55
TVP23B-202ENST00000476139 POLD4Q9HCU8 107 aa18.48■□□□□ 0.55
TVP23B-202ENST00000476139 ZNF70Q9UC06 446 aaPredicted RBP18.48■□□□□ 0.55
TVP23B-202ENST00000476139 ARSHQ5FYA8 562 aa18.48■□□□□ 0.55
TVP23B-202ENST00000476139 NCAPH2Q6IBW4 605 aa18.48■□□□□ 0.55
TVP23B-202ENST00000476139 GPBP1Q86WP2 473 aa18.48■□□□□ 0.55
TVP23B-202ENST00000476139 TTLL6Q8N841 843 aa18.48■□□□□ 0.55
TVP23B-202ENST00000476139 VEZTQ9HBM0 779 aa18.48■□□□□ 0.55
TVP23B-202ENST00000476139 HERVK_113P62684 666 aa18.48■□□□□ 0.55
TVP23B-202ENST00000476139 DLGAP5Q15398 846 aa18.48■□□□□ 0.55
TVP23B-202ENST00000476139 FAM83BQ5T0W9 1011 aa18.48■□□□□ 0.55
TVP23B-202ENST00000476139 MYOCDQ8IZQ8 938 aa18.48■□□□□ 0.55
TVP23B-202ENST00000476139 ZFP91Q96JP5 570 aaPredicted RBP18.48■□□□□ 0.55
TVP23B-202ENST00000476139 ERGIC2Q96RQ1 377 aa18.48■□□□□ 0.55
TVP23B-202ENST00000476139 LRRC27Q9C0I9 530 aa18.48■□□□□ 0.55
TVP23B-202ENST00000476139 TMEM39BQ9GZU3 492 aa18.48■□□□□ 0.55
TVP23B-202ENST00000476139 ZHX3Q9H4I2 956 aa18.48■□□□□ 0.55
TVP23B-202ENST00000476139 CYP11B2P19099 503 aa18.47■□□□□ 0.55
TVP23B-202ENST00000476139 PSMD2Q13200 908 aa18.47■□□□□ 0.55
TVP23B-202ENST00000476139 MEA1Q16626 185 aa18.47■□□□□ 0.55
TVP23B-202ENST00000476139 HERC4Q5GLZ8 1057 aaPredicted RBP18.47■□□□□ 0.55
TVP23B-202ENST00000476139 FAM26FQ5R3K3 315 aa18.47■□□□□ 0.55
TVP23B-202ENST00000476139 FKBP15Q5T1M5 1219 aa18.47■□□□□ 0.55
TVP23B-202ENST00000476139 RSRC2Q7L4I2 434 aaKnown RBP18.47■□□□□ 0.55
TVP23B-202ENST00000476139 NAP1L4Q99733 375 aaKnown RBP18.47■□□□□ 0.55
TVP23B-202ENST00000476139 NHEJ1Q9H9Q4 299 aaPredicted RBP18.47■□□□□ 0.55
TVP23B-202ENST00000476139 BMP2KQ9NSY1 1161 aaPredicted RBP18.47■□□□□ 0.55
TVP23B-202ENST00000476139 ARFGEF1Q9Y6D6 1849 aa18.47■□□□□ 0.55
TVP23B-202ENST00000476139 PLEKP08567 350 aaPredicted RBP18.47■□□□□ 0.55
TVP23B-202ENST00000476139 ZBED6P86452 979 aa18.47■□□□□ 0.55
TVP23B-202ENST00000476139 CCDC84Q86UT8 332 aaPredicted RBP18.47■□□□□ 0.55
TVP23B-202ENST00000476139 SLFN12Q8IYM2 578 aa18.47■□□□□ 0.55
TVP23B-202ENST00000476139 OGFOD1Q8N543 542 aa18.47■□□□□ 0.55
TVP23B-202ENST00000476139 GMLQ99445 158 aa18.47■□□□□ 0.55
TVP23B-202ENST00000476139 NUP58Q9BVL2 599 aa18.47■□□□□ 0.55
TVP23B-202ENST00000476139 TMOD2Q9NZR1 351 aa18.47■□□□□ 0.55
TVP23B-202ENST00000476139 PCDHA2Q9Y5H9 948 aa18.47■□□□□ 0.55
TVP23B-202ENST00000476139 KDM3AQ9Y4C1 1321 aa18.46■□□□□ 0.55
TVP23B-202ENST00000476139 CTAGE9A4FU28 777 aa18.46■□□□□ 0.55
TVP23B-202ENST00000476139 SPATA31C1P0DKV0 1188 aa18.46■□□□□ 0.55
TVP23B-202ENST00000476139 KCNA3P22001 575 aa18.46■□□□□ 0.55
TVP23B-202ENST00000476139 STAT2P52630 851 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms