RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 PTPN21Q16825 1174 aa7.69□□□□□ -1.18
UBR4-212ENST00000475973 FILIP1LQ4L180 1135 aa7.69□□□□□ -1.18
UBR4-212ENST00000475973 CAVIN4Q5BKX8 364 aa7.69□□□□□ -1.18
UBR4-212ENST00000475973 VARS2Q5ST30 1063 aaKnown RBP7.69□□□□□ -1.18
UBR4-212ENST00000475973 EMC10Q5UCC4 262 aa7.69□□□□□ -1.18
UBR4-212ENST00000475973 GALNT17Q6IS24 598 aa7.69□□□□□ -1.18
UBR4-212ENST00000475973 TTI2Q6NXR4 508 aa7.69□□□□□ -1.18
UBR4-212ENST00000475973 CTR9Q6PD62 1173 aa7.69□□□□□ -1.18
UBR4-212ENST00000475973 HDXQ7Z353 690 aa7.69□□□□□ -1.18
UBR4-212ENST00000475973 SLC35F6Q8N357 371 aa7.69□□□□□ -1.18
UBR4-212ENST00000475973 CCDC82Q8N4S0 544 aa7.69□□□□□ -1.18
UBR4-212ENST00000475973 MB21D1Q8N884 522 aa7.69□□□□□ -1.18
UBR4-212ENST00000475973 RETREG2Q8NC44 543 aa7.69□□□□□ -1.18
UBR4-212ENST00000475973 GIMAP8Q8ND71 665 aaPredicted RBP7.69□□□□□ -1.18
UBR4-212ENST00000475973 GOLGA5Q8TBA6 731 aa7.69□□□□□ -1.18
UBR4-212ENST00000475973 NOC3LQ8WTT2 800 aaKnown RBP7.69□□□□□ -1.18
UBR4-212ENST00000475973 CCDC12Q8WUD4 166 aaPredicted RBP7.69□□□□□ -1.18
UBR4-212ENST00000475973 IQCDQ96DY2 449 aa7.69□□□□□ -1.18
UBR4-212ENST00000475973 NAPGQ99747 312 aaPredicted RBP7.69□□□□□ -1.18
UBR4-212ENST00000475973 GBP3Q9H0R5 595 aa7.69□□□□□ -1.18
UBR4-212ENST00000475973 CUEDC2Q9H467 287 aa7.69□□□□□ -1.18
UBR4-212ENST00000475973 THAP9Q9H5L6 903 aa7.69□□□□□ -1.18
UBR4-212ENST00000475973 HAUS4Q9H6D7 363 aa7.69□□□□□ -1.18
UBR4-212ENST00000475973 MAGEF1Q9HAY2 307 aa7.69□□□□□ -1.18
UBR4-212ENST00000475973 ZCCHC17Q9NP64 241 aaKnown RBP7.69□□□□□ -1.18
UBR4-212ENST00000475973 RMND1Q9NWS8 449 aa7.69□□□□□ -1.18
UBR4-212ENST00000475973 EPN1Q9Y6I3 576 aaPredicted RBP7.69□□□□□ -1.18
UBR4-212ENST00000475973 ABCB11O95342 1321 aa7.69□□□□□ -1.18
UBR4-212ENST00000475973 TAF1P21675 1872 aa7.68□□□□□ -1.18
UBR4-212ENST00000475973 A0A1W2PQJ5 194 aa7.68□□□□□ -1.18
UBR4-212ENST00000475973 ANO9A1A5B4 782 aa7.68□□□□□ -1.18
UBR4-212ENST00000475973 ERICH2A1L162 156 aa7.68□□□□□ -1.18
UBR4-212ENST00000475973 CTAGE9A4FU28 777 aa7.68□□□□□ -1.18
UBR4-212ENST00000475973 EIF3CLB5ME19 914 aaKnown RBP7.68□□□□□ -1.18
UBR4-212ENST00000475973 SMIM22K7EJ46 135 aa7.68□□□□□ -1.18
UBR4-212ENST00000475973 SNAP23O00161 211 aa7.68□□□□□ -1.18
UBR4-212ENST00000475973 LAD1O00515 517 aa7.68□□□□□ -1.18
UBR4-212ENST00000475973 PPP1R12BO60237 982 aaPredicted RBP7.68□□□□□ -1.18
UBR4-212ENST00000475973 NDUFA10O95299 355 aa7.68□□□□□ -1.18
UBR4-212ENST00000475973 SMARCA1P28370 1054 aa7.68□□□□□ -1.18
UBR4-212ENST00000475973 ACTN2P35609 894 aa7.68□□□□□ -1.18
UBR4-212ENST00000475973 TDO2P48775 406 aa7.68□□□□□ -1.18
UBR4-212ENST00000475973 USP14P54578 494 aa7.68□□□□□ -1.18
UBR4-212ENST00000475973 VSNL1P62760 191 aa7.68□□□□□ -1.18
UBR4-212ENST00000475973 PAK1Q13153 545 aa7.68□□□□□ -1.18
UBR4-212ENST00000475973 ORC2Q13416 577 aaPredicted RBP7.68□□□□□ -1.18
UBR4-212ENST00000475973 SLC35G1Q2M3R5 365 aa7.68□□□□□ -1.18
UBR4-212ENST00000475973 NOM1Q5C9Z4 860 aaKnown RBP7.68□□□□□ -1.18
UBR4-212ENST00000475973 MFSD14BQ5SR56 506 aa7.68□□□□□ -1.18
UBR4-212ENST00000475973 DMRTA1Q5VZB9 504 aa7.68□□□□□ -1.18
UBR4-212ENST00000475973 PPFIBP1Q86W92 1011 aa7.68□□□□□ -1.18
UBR4-212ENST00000475973 DGKHQ86XP1 1220 aa7.68□□□□□ -1.18
UBR4-212ENST00000475973 CCDC170Q8IYT3 715 aa7.68□□□□□ -1.18
UBR4-212ENST00000475973 OR8K1Q8NGG5 319 aa7.68□□□□□ -1.18
UBR4-212ENST00000475973 FAM71BQ8TC56 605 aa7.68□□□□□ -1.18
UBR4-212ENST00000475973 LRRC15Q8TF66 581 aa7.68□□□□□ -1.18
UBR4-212ENST00000475973 TBC1D22AQ8WUA7 517 aa7.68□□□□□ -1.18
UBR4-212ENST00000475973 NSUN4Q96CB9 384 aaKnown RBP7.68□□□□□ -1.18
UBR4-212ENST00000475973 FAM84BQ96KN1 310 aaPredicted RBP7.68□□□□□ -1.18
UBR4-212ENST00000475973 ERGIC2Q96RQ1 377 aa7.68□□□□□ -1.18
UBR4-212ENST00000475973 EIF3CQ99613 913 aaKnown RBP7.68□□□□□ -1.18
UBR4-212ENST00000475973 DUSP9Q99956 384 aaKnown RBP7.68□□□□□ -1.18
UBR4-212ENST00000475973 VEZTQ9HBM0 779 aa7.68□□□□□ -1.18
UBR4-212ENST00000475973 ABCB6Q9NP58 842 aa7.68□□□□□ -1.18
UBR4-212ENST00000475973 MED4Q9NPJ6 270 aa7.68□□□□□ -1.18
UBR4-212ENST00000475973 ATP8A2Q9NTI2 1148 aa7.68□□□□□ -1.18
UBR4-212ENST00000475973 VPS54Q9P1Q0 977 aa7.68□□□□□ -1.18
UBR4-212ENST00000475973 SEPT9Q9UHD8 586 aaPredicted RBP7.68□□□□□ -1.18
UBR4-212ENST00000475973 FEZ2Q9UHY8 353 aaPredicted RBP7.68□□□□□ -1.18
UBR4-212ENST00000475973 SCAF8Q9UPN6 1271 aaKnown RBP7.68□□□□□ -1.18
UBR4-212ENST00000475973 V9GY48 417 aaPredicted RBP7.68□□□□□ -1.18
UBR4-212ENST00000475973 FLT1P17948 1338 aa7.68□□□□□ -1.18
UBR4-212ENST00000475973 LAMB1P07942 1786 aa7.68□□□□□ -1.18
UBR4-212ENST00000475973 MAST2Q6P0Q8 1798 aa7.68□□□□□ -1.18
UBR4-212ENST00000475973 TRPM7Q96QT4 1865 aa7.67□□□□□ -1.18
UBR4-212ENST00000475973 MAGEB6P1A0A0J9YX57 407 aa7.67□□□□□ -1.18
UBR4-212ENST00000475973 TTC26A0AVF1 554 aa7.67□□□□□ -1.18
UBR4-212ENST00000475973 CLRN2A0PK11 232 aa7.67□□□□□ -1.18
UBR4-212ENST00000475973 CCDC85CA6NKD9 419 aa7.67□□□□□ -1.18
UBR4-212ENST00000475973 BHMG1C9JSJ3 638 aaPredicted RBP7.67□□□□□ -1.18
UBR4-212ENST00000475973 ADAMTS3O15072 1205 aa7.67□□□□□ -1.18
UBR4-212ENST00000475973 SHOX2O60902 331 aaPredicted RBP7.67□□□□□ -1.18
UBR4-212ENST00000475973 TRPA1O75762 1119 aa7.67□□□□□ -1.18
UBR4-212ENST00000475973 AP1G2O75843 785 aa7.67□□□□□ -1.18
UBR4-212ENST00000475973 RPN1P04843 607 aaKnown RBP7.67□□□□□ -1.18
UBR4-212ENST00000475973 PARP1P09874 1014 aaKnown RBP7.67□□□□□ -1.18
UBR4-212ENST00000475973 FDX1P10109 184 aa7.67□□□□□ -1.18
UBR4-212ENST00000475973 SCG2P13521 617 aa7.67□□□□□ -1.18
UBR4-212ENST00000475973 CYP7A1P22680 504 aa7.67□□□□□ -1.18
UBR4-212ENST00000475973 CALML3P27482 149 aa7.67□□□□□ -1.18
UBR4-212ENST00000475973 PBX2P40425 430 aa7.67□□□□□ -1.18
UBR4-212ENST00000475973 PPP1R2P41236 205 aa7.67□□□□□ -1.18
UBR4-212ENST00000475973 PRCPP42785 496 aa7.67□□□□□ -1.18
UBR4-212ENST00000475973 GYG1P46976 350 aa7.67□□□□□ -1.18
UBR4-212ENST00000475973 HERVK_113P62684 666 aa7.67□□□□□ -1.18
UBR4-212ENST00000475973 RAD51AP2Q09MP3 1159 aa7.67□□□□□ -1.18
UBR4-212ENST00000475973 GPS2Q13227 327 aa7.67□□□□□ -1.18
UBR4-212ENST00000475973 DGKZQ13574 1117 aa7.67□□□□□ -1.18
UBR4-212ENST00000475973 CASP8Q14790 479 aa7.67□□□□□ -1.18
UBR4-212ENST00000475973 KARSQ15046 597 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms